Monopterus albus (swamp eel): 109957207
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Entry
109957207 CDS
T05607
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109957207 (focad)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109957207 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
DUF4518
Motif
Other DBs
NCBI-GeneID:
109957207
NCBI-ProteinID:
XP_020450551
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MMESLKTQFDFPSPVVQSQAVRSLVAAVLKEKGQNEKIIQSSPQGPALDALWQQCCSDCA
LVRSTCCEAVVLLVDQGHADLHYILNSVLNLLPSARNVQGLIKIIGRILQMQADQRDREV
HFTCPYSIRSSPHPYITALENRVDCWPALLLEIGDFIQQAADRDEAAYITMLAPFLRYLY
CEPQRQPQYALLRHSLLRVLLPVHPGTRSVLQKKDQQETTTVSDSLLHCLCQLVPHMQLD
SVEAVLELCAFADLLLQSLLQASAERWRIERARLLLQLLCACQRCLRLNGDCRPLLNLIQ
QLAPACQQELPVDELMMGVALLLLEAPAAQQTSLLSLALSLAPEQAELSPWLSPILLLPV
LQLLSCSGLSEPLADRRTYIANQDLTHSLLRSISSQRDKPRESAPVLALPLSSWYSELSV
ALSTLRKVADNPAAAADWLLSVPSALSSSQRLPGSLALIVTHLIITGQKDVCQLALNASQ
AIAAADPCQVPSLIPVLLFKLGKEKNPDLAHAVLNCLPNLGTHKFCVPMVLQTLHMLASA
PKLRAVAMRLMTALWKRQDRVYPELQRLLGQQDSRVVVGRDDQWEQMLARAACLRDICRE
RPYQHGGDMLAAITLILNQCTTPDTATPAALALQGLQELCRAEVVDIISTWRSLGPKLSC
DSRPVMVKAIAELLALVPQLTVKSEQYEKLKEEVVGLLWNYAVCKEPEVASCGYKALADF
PEVVHTITFLPEAARPATKLPEGEEDEQGEEEEEEEKDLSIPGSSYMKLMALTPISVLPS
FELFLKSLVKQEMSQMPRGVYFSALRGANLRSDQGKTVAGIPSFMLKAYEKNKQPGLKPG
LAVGLLLSYELPVQTDRDGKPIDRFLISRSRSYQQTLTALIHEVNIQPSEWHRALLLPQA
WRGFMSRAFHAVLQGRHADLELQLKQGKENPEELQYRLHCAWLWARDQLADVIKAATKDS
PVVQGNSILALSGLAAVLTKYESGLPTDSNSSLRAGPEFVPSASWLAMILDTLLSIISSS
YKARGQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLVQVLSVLQAGL
PGAPTADDSQAVQFHSGLALGMVLSSLYHQGLSDVSVQKETDLLLNSLHTLESCSFNPNL
EYNTGCMLGLGLVLVALCGSGSTDQHAHVTQTLDKLLSNLQDSSGVGRMQQEVLAYSVAC
VGVSAFTGGLIDAAKAEEVMNTLRSLTEESQQTPGFSLALGLAVHGLSVSGHGKAEDIHP
RLLAAWVKILLAEGCPTMQRLAAVSGLVALVGSESYLIQLKSELELSVQQQSRLNEVIRA
ITQIIKFSGAIGLQSNCTCLVGHLHLAHMSTSHSHTAVPQDFSYLSEKSVIRAIADFITE
AGKKGPEFSHPALVKTTLTPLASVGASFQYPPINWNAILSPVMRLGFGEDVQHQCVVLAA
CQAQSSQSASLFLGSWLSPPLVYSLSYPTRAYLYETLGLWMKHVAEDKLQVYMESLGLQQ
FQEDLRPQRLSLCRSLLQGLAQAMALPNPPNNCWTILCTASEKIFNLLPNEIQDGEVDLY
VGITKCLSEMSDTEIERITRVTETQMEKTCFVLAYLTSQGRVPLLGLNDVIAGVLRGWPR
RRVGWLLLQSFYQCRLAASSTTGVSKRMEWLLELMGHIRNVAYGATSVTSGDTKQCTDFL
FQIFAAVVVSWGDHSMPLLLGIRAQLFPWQYGSKPPALTHSLYGVESLTDHALPQCLLGL
SHSLALLLDKEPWSSQTHKFIDWLLSIAEVPEKNVSAKTISAAKAALLVLKSSAEFKKKA
VWTRAYGW
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagtttgaaaacccagtttgattttcccagccctgtcgtacaatcccaggca
gtgagaagtcttgttgctgctgtgctaaaggagaaagggcaaaatgagaaaattatccag
tcctctcctcagggcccagctctggatgccctgtggcagcagtgctgcagtgactgtgcg
ctggtgcgttccacctgctgtgaggctgtggtactgctggtggatcagggccacgcagac
ctgcactacatcctcaacagtgtcctcaacctcctgccctctgccagaaacgtccagggg
ctgataaagataattggacggatactacagatgcaggcagaccagagagacagagaagta
cacttcacctgtccttactccatcaggagcagccctcacccgtacatcacagccctggag
aaccgagtggactgctggccagctctgctgttggagattggtgacttcattcagcaggct
gctgacagagatgaagcagcctatatcaccatgctggcacccttcctgcgttacctgtat
tgtgaacctcagaggcaaccccagtacgctctcctccgacacagtctcctcagggtactg
ctgcccgtacatccaggaaccagatcggtcctccagaaaaaggaccagcaggagaccacc
acagtgtcggacagtctgcttcactgcctctgccagcttgttccacacatgcagctggac
agcgtggaggcagtgttggagctgtgtgcttttgccgaccttcttcttcagagtctcctc
caggcttctgcggagcgctggaggattgagagagccaggctgctcctgcagctgctttgt
gcctgtcagcgctgtctcaggttaaatggagactgccgaccccttctcaacttaatacag
cagctcgcccctgcctgccagcaggagctgccagtcgatgagctgatgatgggtgtggca
ttgctcctgctagaggcccctgcagctcagcagaccagcctgctcagtctggcgctgagt
ttggctcctgagcaggctgagctgtcaccctggttgagtccaatcctgcttcttcctgtg
ctgcagctcctgtcctgttcgggtcttagtgaaccgctggctgaccggaggacatacatc
gccaaccaagatttgacccacagcctgctccgcagcatcagcagccagagagataaaccc
cgagagtctgctccagttttggcacttcctctcagctcctggtacagcgagctcagcgtg
gctctgtccacactgcgtaaagtggcagataatccagcggcggcagctgattggctgctg
tcggtcccctcagccctgtcatccagccagcgcctgccgggctcgctcgccctcattgtg
actcatctcatcatcacgggacagaaggacgtctgccagctggctttgaatgcaagccag
gccattgctgcagctgatccctgccaggtcccttcactcatccctgtcctgttgttcaaa
ctggggaaggaaaagaatccagatctggctcatgctgtgctcaactgcctgccaaacctg
gggactcataagttctgtgtccccatggtgctgcagactctccacatgctggccagtgcc
cccaagctgagagctgtggcaatgcgcctcatgactgctctctggaagagacaggaccga
gtgtacccagagctccagcgtctgctgggtcagcaggacagcagggtggtggtggggagg
gacgaccagtgggagcagatgctagccagagctgcctgcctcagggacatctgcagagag
agaccttaccagcatggaggtgacatgctggctgccattacacttattctgaatcagtgt
actacaccagacacggcaacccccgctgctctcgccctgcaaggactccaggagctgtgc
cgagcagaggtagtagacatcatctcaacatggaggagtcttgggcctaagctcagctgc
gactcccgtccagtgatggtcaaagccatagctgagctgctggctctggttccccagctc
actgtcaagtcagagcagtatgagaaactgaaagaagaggtggtcggtcttctctggaat
tatgctgtgtgtaaggagccagaggtggccagctgtggctataaggctttggcagacttt
cctgaagtggtccacacaataactttccttcctgaggctgcgaggccagctacaaagctc
cctgaaggtgaggaagatgaacagggtgaagaggaagaggaagaggagaaggatctctcc
atcccaggttcatcttacatgaagctgatggctctcacccccatatctgtcctaccctca
ttcgagctcttcttgaagtcactggtgaagcaggagatgagccagatgccacggggggta
tacttctctgccctaaggggagctaacctgcgatccgatcagggtaaaacagtggcagga
atcccatcatttatgctgaaagcctacgagaaaaacaagcagcctgggctgaagcctgga
ctagcagtcggactgctgctgtcttatgagctgcctgtgcagacggaccgtgatgggaaa
ccaatcgatcgcttcctcatcagtcgcagccgcagctaccagcagaccttgacagccctc
attcatgaggtgaacattcagccatctgaatggcacagagcactactcttaccccaagcc
tggaggggtttcatgagccgagccttccatgcagtgttacagggtcgacatgctgatttg
gaactgcagctgaaacaaggcaaagaaaacccggaggagctgcagtacaggctgcactgt
gcctggctgtgggccagagatcagctggcagacgtcatcaaagctgctaccaaggacagt
cctgttgtacagggaaactccatcctggctctgagcggcctggccgctgtccttactaag
tatgagagcggcctgcccactgacagtaacagcagcctcagggctggaccagaatttgtg
ccctcggccagctggttggccatgatactcgacaccctgctcagtatcatcagcagcagc
tacaaggccagaggacaggtttttccgtggttcctgcatcgttcctactcaggggagaac
acagcaagtgccatagctcgctcctgtgccagtctggcattgtccctactggtcccagtg
ctggtggtgtggcagagggacggtctggttcaggtcctgtcagtgctgcaggccggcctc
ccaggtgcacccaccgctgatgactcccaggctgtccagttccactctggcctcgcactg
ggcatggtgctgtccagtctgtatcaccaaggcctcagtgatgtctctgtccaaaaggag
acagatctcctactcaactctctgcacactctggaaagttgctccttcaaccccaaccta
gaatacaataccggctgtatgttgggtctgggtctggtgttggtggctctgtgcggtagt
ggatcgacagaccagcacgcccatgtcacccagacactagataaactactgtccaacctg
caggacagcagtggggtgggacgcatgcagcaggaggtcttggcatactctgtggcgtgt
gtcggcgtctcagcgttcactggaggtctgatcgatgctgccaaggctgaggaggtcatg
aacactctgcgcagcctgactgaagaaagccagcagaccccaggcttctccttggctcta
gggttggcggtccacggattgtcagtgtctggtcatggtaaagcagaggacatccaccct
cgtctgctggctgcttgggtcaagatcttactggctgagggttgtcccactatgcagcga
ctggctgctgtcagcggcctggtggccttagtgggatctgagagttacctcattcagctt
aaaagtgagctggagctttccgtccagcagcagagcaggctcaatgaggttattcgagcc
atcacacagatcatcaagttctccggagccattggtttgcagtccaactgtacctgtttg
gtgggtcacttgcatttggcccacatgtccaccagtcacagccacacagcagttcctcag
gatttcagttacctctcagagaaaagtgtcatcagagccatcgctgacttcatcacagag
gctggaaagaaaggtccagagttctctcatccagctctggttaagaccactctgaccccc
ctggcatcagttggggccagttttcagtacccacccatcaactggaacgccattctgtct
cctgtgatgaggctcggctttggagaggatgtgcagcatcagtgtgtggtgttggcagca
tgtcaagctcagtcttcccagagtgcatctctctttctgggctcctggctttcaccaccc
cttgtgtacagtctcagttacccgacccgggcctacctgtatgagaccctgggtttatgg
atgaagcatgttgctgaggataagctgcaggtctacatggagagtcttggcctgcagcag
ttccaggaggaccttcgaccccagcgtctgtccctgtgccgctccctgctgcagggcctc
gctcaggccatggccctcccaaaccccccaaacaactgctggaccatcctctgcactgcc
agtgagaagatcttcaatctcctgcccaacgaaattcaggatggtgaagtggatttgtat
gtgggaatcaccaaatgtctgtctgagatgtctgataccgagattgagcgaatcactcga
gtcacagagacccagatggagaagacctgcttcgtcctggcttacctcacctctcagggc
agagttcccctcctgggtctcaatgatgtcatcgctggtgtacttcgtggttggccgaga
cgcagagtaggctggctcctactacagagtttctatcagtgtcgcctggctgccagttca
accacaggcgtctccaaaagaatggagtggctcctggagctgatgggccacatccgaaat
gttgcctacggtgccacttccgtgacttctggagacaccaaacagtgcacagacttcctg
ttccagatctttgctgctgttgtagtttcctggggggaccactccatgcccctcctactt
ggcatcagggcccagctgttcccatggcaatatggatccaagcccccagccttaacacat
agtctatacggtgtggagtcactcactgaccacgccctgccccagtgcctgctgggattg
tcccacagcctggctctgcttctggacaaagagccctggagcagccagacacacaagttc
atagactggcttctcagcatcgcagaagttcctgagaagaatgtgtcagccaagaccatt
agcgcagccaaagccgccctgttggtcttaaagtcttctgctgagttcaagaagaaagct
gtgtggaccagagcttatggctggtag
DBGET
integrated database retrieval system