Monopterus albus (swamp eel): 109957671
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Entry
109957671 CDS
T05607
Name
(RefSeq) collagen alpha-1(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04510
Focal adhesion
malb04512
ECM-receptor interaction
malb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109957671
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109957671
09142 Cell motility
04820 Cytoskeleton in muscle cells
109957671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
malb04147
]
109957671
00536 Glycosaminoglycan binding proteins [BR:
malb00536
]
109957671
Exosome [BR:
malb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109957671
Glycosaminoglycan binding proteins [BR:
malb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109957671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109957671
NCBI-ProteinID:
XP_020451405
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MERPVFIVTLTLFAVMLMGIGANNCVCSRRSRCHCEGVKGSRGDRGFPGVSGPPGPDGRP
GPDGHVGPMGPKGSTGPDGTVGSKGNPGPEGKEGFAGSHGLPGIPGLQGPPGPPGAPGCN
GTDGDDGPPGIPGAHGIDGLPGPPGLPGPKGDSWVSVNPTPGPLGLPGRDGEPGIPGLPG
DTGPSGDPGPQGSVGLPGHPGAPGSKGQEGTGGVPGPRGSKGRPGQPGLPGPPGRVREFF
TESVVLKFVKGNKGDIGEKGCRGQPGDPGYGFYGKGAKGDKGEEGPQGKAGKEGDPGQPG
LKGWPGPRGDPGYSGTPGWTGEKGNRGPSGPPGDIFGPGTQPLKGYHGDPGSPGTPGLPG
HQGPVGFPGPVGPPGYALGSYVPGPPGPVGFPGPKGDPGEPGDIYWGLPGPDGDPGYPGP
PGNPGPPGPPEDRTNRITKGLPGMKGRKGIPGPMGYDGIFGKKGEKGEPCYECIGSGYPG
PPGPPGPVGIPGYNSGPGAKGDPGSPGPRGLPGRPGPIGQTGFPGPPGQKGESYSYSTPG
INGEMGDPGQPGRPGPDGRTGLPGLPGRKGHQGPPGDSYPFPGVEGDRGFPGPLGTVGRP
GPVGYRGPVGYGPIGLPGSKGDAGVPGLPGHPGIPGQKGEPIHIHYLGLPGPPGFEGRPG
LPGSPGYQGAPGIPGAPGPPGQKGKKGDVSFPGRPGIPGQKGEKGRLGLPGMPGRGLPGH
PGPQGPPGPPGLKGDSGPGYPGPPGPPGVPGEVGAQGREGDPGAPGLPGNPGLTGSPGFP
GEKGSKGYAGLPGLPGSKDSCVGLPGPVGSPGPDGYQGHPGPNGLLGEKGNAGLPGFGHP
GPPGEPGSAGLSVPGLPGAPGQKGVRGQNGFPGQPGLRGDPGPNGIPGYGLDGLPGTVGP
PGPIGSPGPNGARGPRGPPGMTGDPGPRGLPGPSSPQPINIVGPPGDPGESGHPGLTGPP
GDPGRAGSKGQRGREGAPGGPGQRGALGDPGIDGPVFSEGSRGPAGAPGDPGVRGPSGSK
GIKGDQGIPGRPGPTGATGPPGLKGSNGEPFYYGYGPRGPVGQKGEPGLSSTIVMKGQKG
EPGVGGLVGLLGDRGAKGTPGPVGEYGSPGYQGPKGSDGSPGSKGHPGPIGWPGDPGPQG
VGGYLGPKGNQGQDGIPGPPGQKGDTTVIEGAPGRRGDTGLPGPHGNPGPPGLSVTASPG
PIGDRGFQGRPGASGPRGPSGREGACIPGPKGDRGHPGNPGAPGFPGFPGPPGPAVTGLK
GDTGDPGPTGSPGYIGQPGDPGPPGPPGGKGRAGDPGPRGDYGPPGHHGPPGDIGGPGKI
PGLPGPPGTKGLPGQPGLKGLPAFARVIYEPGPPGLPGHLGNRGVPGITGPSGPPGRPGQ
PGAKGVHGSSQVGQPGFPGNKGDKGIAGLQGLKGIPGGPGHKGPPGPPGRSGPDHVYSFL
IARHSQSIHVPQCPQGTSLIYSGYSFLFMNGNERTHGQDLGKCMETFMPRNTVQILHRFV
DTYRTSSNTSNLGSMGSCLPRFSTMPFLFCDTEASCRYASRNDYSYWLSTDTPMPANMVA
ITGDKLSSYISRCSVCETTSNVIAVHSQTTVIPECPRGWESLWTGYSFVMQIGVGAGGST
QPLVSPGSCLESFRQVPFIECHDRGTCNYYPDSYSYWLASLDPRNMFSKPIPQTVKGPSL
QSIISRCRVCRKPWQPGSDERRGDNF
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggccggtcttcatagtcactctgacactgtttgctgtgatgctgatgggcatt
ggggccaacaattgtgtttgcagcagaagatcaaggtgccactgtgagggagtgaaaggc
agcaggggagacagaggtttcccaggagtttcagggccccctgggccagatggccgtccg
ggaccagatggtcatgttgggcctatgggaccaaagggcagcactggacctgatggaacg
gtggggtccaaaggaaatccgggaccagaaggcaaagaagggtttgctggctctcatggt
ctcccaggtatcccaggattacaggggcctcctggccccccaggtgccccaggttgcaac
ggaaccgatggagacgatggacctcctggtattcctggtgcccatggtattgatggactt
ccaggtccaccaggtctgcctggacctaagggtgactcttgggtatcagtgaatccaacg
ccaggaccattggggctgcctgggagggacggagagccgggcattccaggtttacctgga
gatactggaccatcaggggaccccggaccacaaggctctgtcgggcttcctggccatcca
ggagcaccaggatctaagggtcaagaaggcacaggcggcgtcccaggacctcgtggatca
aaggggagaccaggccaaccgggcctgccagggccaccaggtcgggttagggagtttttc
actgagagtgttgtgttaaagtttgtaaaaggaaacaaaggagacatcggagaaaaaggc
tgcaggggacaaccaggagaccctggttatggcttttatggaaaaggagcaaagggagac
aaaggagaggagggtccacagggaaaggcagggaaggaaggtgatcctggacaacctgga
ttaaagggatggcccggccctagaggtgatccaggatattcggggacaccaggatggaca
ggtgaaaagggaaataggggcccatctggtccacctggagatatatttggacctgggact
cagccactcaaaggataccatggagatccaggttccccaggcacacctgggctccctggc
catcaaggtcctgtgggatttcctggacctgtgggacctccaggctatgccctgggaagt
tatgtgccaggtccacctggtcctgttggctttccaggccccaaaggggaccctggggag
cctggggatatttattggggactgccaggtccagatggggatcctggttatccagggcct
cctggaaatcctggcccacctggacctccagaagatagaactaataggattaccaagggt
ctcccaggaatgaagggaaggaagggtatacctggacctatgggatatgatgggatattt
ggaaagaaaggagagaagggggagccctgttacgagtgtattggatcaggatacccagga
ccaccaggtccccctggtccagtcggcatccctggctacaattcaggaccaggtgccaaa
ggtgatccaggcagcccaggaccaagaggattacctggaagaccaggtcctattggtcaa
acaggatttcctggtcctcctggacaaaaaggagaatcgtattcctacagcacccctgga
attaacggagagatgggagacccaggacagcctggcaggcctggtccagatggtcgtact
gggcttcctgggttaccgggccggaaaggacatcaaggccctccaggagattcgtatccc
ttccctggagtggagggagatcgtggtttcccaggtccactagggactgtaggtagacca
ggaccagttggctatcgtgggccagtaggatatgggcctattggacttccaggaagtaaa
ggagatgctggggtacctggcttgccaggacatcctggaattccaggccagaaaggggaa
cctatccacatccattacctaggacttcctggaccacctggatttgaaggtcggcctggt
ttacccggaagcccaggttatcaaggagcaccaggtattccaggagcacctggtcctcca
ggacagaaaggcaaaaaaggagacgtgtcatttcctggaaggccagggatcccaggacag
aaaggtgaaaaggggcggctgggtcttccaggcatgccaggtaggggcttacctggtcat
ccaggtccacaaggtcctcctggtcctccaggattgaagggtgacagtggccctggatac
cctggccccccaggtcccccaggggttccaggagaagtcggcgctcaggggcgtgaagga
gatcctggggcccctggtctacctgggaacccagggctaactggcagtcctggttttcca
ggagaaaaaggaagtaaaggttatgcagggctcccaggactacctggtagcaaagattca
tgtgttggtttacctgggccagtgggatcacctggaccagatggctatcaaggacatcca
ggacctaatggcttgcttggtgagaaggggaatgcaggcttgccagggtttggtcacccc
ggcccccctggtgagcctggctctgctggactatctgtgccgggtttacctggggctcct
gggcaaaaaggcgtgagaggacaaaacggcttccctggtcaaccaggactacgaggagac
cctggtccaaatggaataccaggatatggactagatggattgcctggaactgtaggacca
ccaggcccaatcggttctcctggccccaatggagccagaggtcccaggggtccaccagga
atgactggagacccaggtcccagaggtcttccaggcccttcatcaccacaaccaatcaac
attgttggccccccgggggaccctggtgaatcaggtcaccctggtctaactggcccccct
ggagatcctggaagagctggatccaaagggcagagagggagagagggagcaccagggggt
cctggacaaagaggcgccctaggtgatccaggtattgatggaccagtgttctcagaagga
agtcgaggacctgctggagccccgggagacccaggagttagaggaccttcaggctcaaaa
ggaataaaaggagatcaaggaatccctggaaggccaggtccaactggtgcaacaggtcca
cctggtttaaaaggaagtaatggagaaccattttactatggatatggaccacgtggaccg
gtaggacaaaagggtgaaccaggattaagcagtactattgtgatgaagggtcagaaggga
gaacctggtgttggtggactagtaggtctacttggagaccgtggagccaaaggaacccca
ggacctgttggagaatatggttcaccaggctatcaagggcctaaaggttccgatgggtcc
ccaggaagcaaaggacacccaggacctattggatggccaggtgacccaggtccacagggt
gtcggtggctatcttggtcctaaaggaaaccagggccaggatgggatccctggaccacca
ggacagaaaggggacactactgtaatcgaaggggcacccggaaggcgtggtgacacaggt
ctgccaggcccccatgggaaccctggtcctcctggcttgtctgttacagcaagtcctgga
ccaataggagacagaggatttcaaggtcgacctggggcctccggtccaagaggaccatca
ggtagagaaggggcatgtattcctgggcctaaaggagaccgtggccatcctgggaatcct
ggcgccccaggctttcctggattccctggccctccaggtccagctgtgactgggcttaaa
ggagacacaggggacccaggtcctacaggaagcccaggctatattggacagccaggggat
ccaggccctccaggaccacctggtggaaagggcagagctggagacccaggacccaggggt
gactatggtcctcctggacaccatgggccccctggtgacataggaggccctgggaaaatc
ccaggcctgcctggaccacctgggaccaaaggattacctggacaacctggcttaaaaggt
ctaccagcatttgccagagtcatatatgaaccaggaccgcctggtttacctggtcatctt
ggcaatagaggagttccagggatcactggaccatcagggccaccaggccgtccaggccag
ccaggcgccaaaggagtccatggttccagccaagttggccagcctggatttcctggcaac
aaaggagataaaggaatagctggtctgcaaggcctaaaaggaatacctggaggcccaggc
cacaagggacctccagggccgcctggtagaagtggcccagatcatgtttacagttttctg
atagctaggcacagtcagagcatccatgtccctcagtgccctcaaggcaccagtctcatc
tactctggttactcctttctctttatgaatggaaatgagagaactcatggtcaggacctt
ggtaagtgcatggaaacctttatgcccaggaatactgtacagattctgcaccgttttgtc
gatacttaccgtacgtcttctaacacttcaaacttaggctctatgggaagctgtctccct
cgtttctccaccatgcccttcctgttctgtgacacagaagcaagctgccgctatgcttct
cgtaacgactactcatactggctgtccactgacacgcctatgcctgccaacatggttgcc
atcacgggggataagctctcctcatacatcagcaggtgctcagtgtgtgaaaccacctcc
aatgtcatagctgtccacagccagacaactgtgatacctgaatgtcccagaggctgggaa
tctctatggactggttactcctttgtcatgcaaataggagtaggtgcgggtggctccact
caaccactggtttctcctggttcttgtctggaaagtttccgccaagtacccttcatcgag
tgtcatgacaggggaacatgtaactactaccctgattcctatagctactggctggcctcc
cttgaccccagaaacatgttcagtaaacctattcctcagacagtgaagggaccttctcta
caaagtattatcagccgatgtcgggtctgtaggaaaccatggcaacctggctcagatgag
agacgcggggacaacttttaa
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integrated database retrieval system
