Monopterus albus (swamp eel): 109957671
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Entry
109957671 CDS
T05607
Name
(RefSeq) collagen alpha-1(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04382
Cornified envelope formation
malb04510
Focal adhesion
malb04512
ECM-receptor interaction
malb04518
Integrin signaling
malb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109957671
04518 Integrin signaling
109957671
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109957671
09142 Cell motility
04820 Cytoskeleton in muscle cells
109957671
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109957671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
malb04147
]
109957671
00536 Glycosaminoglycan binding proteins [BR:
malb00536
]
109957671
Exosome [BR:
malb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109957671
Glycosaminoglycan binding proteins [BR:
malb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109957671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109957671
NCBI-ProteinID:
XP_020451405
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MERPVFIVTLTLFAVMLMGIGANNCVCSRRSRCHCEGVKGSRGDRGFPGVSGPPGPDGRP
GPDGHVGPMGPKGSTGPDGTVGSKGNPGPEGKEGFAGSHGLPGIPGLQGPPGPPGAPGCN
GTDGDDGPPGIPGAHGIDGLPGPPGLPGPKGDSWVSVNPTPGPLGLPGRDGEPGIPGLPG
DTGPSGDPGPQGSVGLPGHPGAPGSKGQEGTGGVPGPRGSKGRPGQPGLPGPPGRVREFF
TESVVLKFVKGNKGDIGEKGCRGQPGDPGYGFYGKGAKGDKGEEGPQGKAGKEGDPGQPG
LKGWPGPRGDPGYSGTPGWTGEKGNRGPSGPPGDIFGPGTQPLKGYHGDPGSPGTPGLPG
HQGPVGFPGPVGPPGYALGSYVPGPPGPVGFPGPKGDPGEPGDIYWGLPGPDGDPGYPGP
PGNPGPPGPPEDRTNRITKGLPGMKGRKGIPGPMGYDGIFGKKGEKGEPCYECIGSGYPG
PPGPPGPVGIPGYNSGPGAKGDPGSPGPRGLPGRPGPIGQTGFPGPPGQKGESYSYSTPG
INGEMGDPGQPGRPGPDGRTGLPGLPGRKGHQGPPGDSYPFPGVEGDRGFPGPLGTVGRP
GPVGYRGPVGYGPIGLPGSKGDAGVPGLPGHPGIPGQKGEPIHIHYLGLPGPPGFEGRPG
LPGSPGYQGAPGIPGAPGPPGQKGKKGDVSFPGRPGIPGQKGEKGRLGLPGMPGRGLPGH
PGPQGPPGPPGLKGDSGPGYPGPPGPPGVPGEVGAQGREGDPGAPGLPGNPGLTGSPGFP
GEKGSKGYAGLPGLPGSKDSCVGLPGPVGSPGPDGYQGHPGPNGLLGEKGNAGLPGFGHP
GPPGEPGSAGLSVPGLPGAPGQKGVRGQNGFPGQPGLRGDPGPNGIPGYGLDGLPGTVGP
PGPIGSPGPNGARGPRGPPGMTGDPGPRGLPGPSSPQPINIVGPPGDPGESGHPGLTGPP
GDPGRAGSKGQRGREGAPGGPGQRGALGDPGIDGPVFSEGSRGPAGAPGDPGVRGPSGSK
GIKGDQGIPGRPGPTGATGPPGLKGSNGEPFYYGYGPRGPVGQKGEPGLSSTIVMKGQKG
EPGVGGLVGLLGDRGAKGTPGPVGEYGSPGYQGPKGSDGSPGSKGHPGPIGWPGDPGPQG
VGGYLGPKGNQGQDGIPGPPGQKGDTTVIEGAPGRRGDTGLPGPHGNPGPPGLSVTASPG
PIGDRGFQGRPGASGPRGPSGREGACIPGPKGDRGHPGNPGAPGFPGFPGPPGPAVTGLK
GDTGDPGPTGSPGYIGQPGDPGPPGPPGGKGRAGDPGPRGDYGPPGHHGPPGDIGGPGKI
PGLPGPPGTKGLPGQPGLKGLPAFARVIYEPGPPGLPGHLGNRGVPGITGPSGPPGRPGQ
PGAKGVHGSSQVGQPGFPGNKGDKGIAGLQGLKGIPGGPGHKGPPGPPGRSGPDHVYSFL
IARHSQSIHVPQCPQGTSLIYSGYSFLFMNGNERTHGQDLGKCMETFMPRNTVQILHRFV
DTYRTSSNTSNLGSMGSCLPRFSTMPFLFCDTEASCRYASRNDYSYWLSTDTPMPANMVA
ITGDKLSSYISRCSVCETTSNVIAVHSQTTVIPECPRGWESLWTGYSFVMQIGVGAGGST
QPLVSPGSCLESFRQVPFIECHDRGTCNYYPDSYSYWLASLDPRNMFSKPIPQTVKGPSL
QSIISRCRVCRKPWQPGSDERRGDNF
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggccggtcttcatagtcactctgacactgtttgctgtgatgctgatgggcatt
ggggccaacaattgtgtttgcagcagaagatcaaggtgccactgtgagggagtgaaaggc
agcaggggagacagaggtttcccaggagtttcagggccccctgggccagatggccgtccg
ggaccagatggtcatgttgggcctatgggaccaaagggcagcactggacctgatggaacg
gtggggtccaaaggaaatccgggaccagaaggcaaagaagggtttgctggctctcatggt
ctcccaggtatcccaggattacaggggcctcctggccccccaggtgccccaggttgcaac
ggaaccgatggagacgatggacctcctggtattcctggtgcccatggtattgatggactt
ccaggtccaccaggtctgcctggacctaagggtgactcttgggtatcagtgaatccaacg
ccaggaccattggggctgcctgggagggacggagagccgggcattccaggtttacctgga
gatactggaccatcaggggaccccggaccacaaggctctgtcgggcttcctggccatcca
ggagcaccaggatctaagggtcaagaaggcacaggcggcgtcccaggacctcgtggatca
aaggggagaccaggccaaccgggcctgccagggccaccaggtcgggttagggagtttttc
actgagagtgttgtgttaaagtttgtaaaaggaaacaaaggagacatcggagaaaaaggc
tgcaggggacaaccaggagaccctggttatggcttttatggaaaaggagcaaagggagac
aaaggagaggagggtccacagggaaaggcagggaaggaaggtgatcctggacaacctgga
ttaaagggatggcccggccctagaggtgatccaggatattcggggacaccaggatggaca
ggtgaaaagggaaataggggcccatctggtccacctggagatatatttggacctgggact
cagccactcaaaggataccatggagatccaggttccccaggcacacctgggctccctggc
catcaaggtcctgtgggatttcctggacctgtgggacctccaggctatgccctgggaagt
tatgtgccaggtccacctggtcctgttggctttccaggccccaaaggggaccctggggag
cctggggatatttattggggactgccaggtccagatggggatcctggttatccagggcct
cctggaaatcctggcccacctggacctccagaagatagaactaataggattaccaagggt
ctcccaggaatgaagggaaggaagggtatacctggacctatgggatatgatgggatattt
ggaaagaaaggagagaagggggagccctgttacgagtgtattggatcaggatacccagga
ccaccaggtccccctggtccagtcggcatccctggctacaattcaggaccaggtgccaaa
ggtgatccaggcagcccaggaccaagaggattacctggaagaccaggtcctattggtcaa
acaggatttcctggtcctcctggacaaaaaggagaatcgtattcctacagcacccctgga
attaacggagagatgggagacccaggacagcctggcaggcctggtccagatggtcgtact
gggcttcctgggttaccgggccggaaaggacatcaaggccctccaggagattcgtatccc
ttccctggagtggagggagatcgtggtttcccaggtccactagggactgtaggtagacca
ggaccagttggctatcgtgggccagtaggatatgggcctattggacttccaggaagtaaa
ggagatgctggggtacctggcttgccaggacatcctggaattccaggccagaaaggggaa
cctatccacatccattacctaggacttcctggaccacctggatttgaaggtcggcctggt
ttacccggaagcccaggttatcaaggagcaccaggtattccaggagcacctggtcctcca
ggacagaaaggcaaaaaaggagacgtgtcatttcctggaaggccagggatcccaggacag
aaaggtgaaaaggggcggctgggtcttccaggcatgccaggtaggggcttacctggtcat
ccaggtccacaaggtcctcctggtcctccaggattgaagggtgacagtggccctggatac
cctggccccccaggtcccccaggggttccaggagaagtcggcgctcaggggcgtgaagga
gatcctggggcccctggtctacctgggaacccagggctaactggcagtcctggttttcca
ggagaaaaaggaagtaaaggttatgcagggctcccaggactacctggtagcaaagattca
tgtgttggtttacctgggccagtgggatcacctggaccagatggctatcaaggacatcca
ggacctaatggcttgcttggtgagaaggggaatgcaggcttgccagggtttggtcacccc
ggcccccctggtgagcctggctctgctggactatctgtgccgggtttacctggggctcct
gggcaaaaaggcgtgagaggacaaaacggcttccctggtcaaccaggactacgaggagac
cctggtccaaatggaataccaggatatggactagatggattgcctggaactgtaggacca
ccaggcccaatcggttctcctggccccaatggagccagaggtcccaggggtccaccagga
atgactggagacccaggtcccagaggtcttccaggcccttcatcaccacaaccaatcaac
attgttggccccccgggggaccctggtgaatcaggtcaccctggtctaactggcccccct
ggagatcctggaagagctggatccaaagggcagagagggagagagggagcaccagggggt
cctggacaaagaggcgccctaggtgatccaggtattgatggaccagtgttctcagaagga
agtcgaggacctgctggagccccgggagacccaggagttagaggaccttcaggctcaaaa
ggaataaaaggagatcaaggaatccctggaaggccaggtccaactggtgcaacaggtcca
cctggtttaaaaggaagtaatggagaaccattttactatggatatggaccacgtggaccg
gtaggacaaaagggtgaaccaggattaagcagtactattgtgatgaagggtcagaaggga
gaacctggtgttggtggactagtaggtctacttggagaccgtggagccaaaggaacccca
ggacctgttggagaatatggttcaccaggctatcaagggcctaaaggttccgatgggtcc
ccaggaagcaaaggacacccaggacctattggatggccaggtgacccaggtccacagggt
gtcggtggctatcttggtcctaaaggaaaccagggccaggatgggatccctggaccacca
ggacagaaaggggacactactgtaatcgaaggggcacccggaaggcgtggtgacacaggt
ctgccaggcccccatgggaaccctggtcctcctggcttgtctgttacagcaagtcctgga
ccaataggagacagaggatttcaaggtcgacctggggcctccggtccaagaggaccatca
ggtagagaaggggcatgtattcctgggcctaaaggagaccgtggccatcctgggaatcct
ggcgccccaggctttcctggattccctggccctccaggtccagctgtgactgggcttaaa
ggagacacaggggacccaggtcctacaggaagcccaggctatattggacagccaggggat
ccaggccctccaggaccacctggtggaaagggcagagctggagacccaggacccaggggt
gactatggtcctcctggacaccatgggccccctggtgacataggaggccctgggaaaatc
ccaggcctgcctggaccacctgggaccaaaggattacctggacaacctggcttaaaaggt
ctaccagcatttgccagagtcatatatgaaccaggaccgcctggtttacctggtcatctt
ggcaatagaggagttccagggatcactggaccatcagggccaccaggccgtccaggccag
ccaggcgccaaaggagtccatggttccagccaagttggccagcctggatttcctggcaac
aaaggagataaaggaatagctggtctgcaaggcctaaaaggaatacctggaggcccaggc
cacaagggacctccagggccgcctggtagaagtggcccagatcatgtttacagttttctg
atagctaggcacagtcagagcatccatgtccctcagtgccctcaaggcaccagtctcatc
tactctggttactcctttctctttatgaatggaaatgagagaactcatggtcaggacctt
ggtaagtgcatggaaacctttatgcccaggaatactgtacagattctgcaccgttttgtc
gatacttaccgtacgtcttctaacacttcaaacttaggctctatgggaagctgtctccct
cgtttctccaccatgcccttcctgttctgtgacacagaagcaagctgccgctatgcttct
cgtaacgactactcatactggctgtccactgacacgcctatgcctgccaacatggttgcc
atcacgggggataagctctcctcatacatcagcaggtgctcagtgtgtgaaaccacctcc
aatgtcatagctgtccacagccagacaactgtgatacctgaatgtcccagaggctgggaa
tctctatggactggttactcctttgtcatgcaaataggagtaggtgcgggtggctccact
caaccactggtttctcctggttcttgtctggaaagtttccgccaagtacccttcatcgag
tgtcatgacaggggaacatgtaactactaccctgattcctatagctactggctggcctcc
cttgaccccagaaacatgttcagtaaacctattcctcagacagtgaagggaccttctcta
caaagtattatcagccgatgtcgggtctgtaggaaaccatggcaacctggctcagatgag
agacgcggggacaacttttaa
DBGET
integrated database retrieval system
