Monopterus albus (swamp eel): 109957813
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Entry
109957813 CDS
T05607
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109957813 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109957813 (exosc1)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109957813 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109957813 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109957813
NCBI-ProteinID:
XP_020451637
UniProt:
A0A3Q3IWK8
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MFKAIMLYCSRSKEGDKLCSVEDCNPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVV
RETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKV
ETYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPR
TQSKEFRKVARVQPEYLQA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggctattatgttgtactgttcacggtcaaaggagggtgacaaactatgcagt
gtagaagactgtaatcctggcacaggagtgtatctgcggcatggctacatatactcctca
ctagcaggctatgtgctcaggaaaaatgagggagaggagttaccagtgatttcagtagtg
cgggaaacagaagcacaacttctgccagatgtaggagctatagtcacctgtaaggtgacc
agcatcaaccccaggttcgccaaggttcacattctctatgtaggctccacacccctcaaa
gaccgcttcagggggactatcagaaaagaagatgtgcgtgcaacagagaaggacaaggtg
gagacgtacaaaagcttcagacctggcgacattgtcctggcaaaagtgatttctctgggt
gacgttcagtctaactacctgctgacgacggcggagaatgagctgggggtggtggtggca
cacagtgaagcaggtgcccagatggttcccatcagctggtgtgagatgcagtgcccacgg
acacaatccaaagagtttcgcaaagtggcccgagtgcagccggagtatctgcaggcgtga
DBGET
integrated database retrieval system
