Monopterus albus (swamp eel): 109957834
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Entry
109957834 CDS
T05607
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109957834 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malb03021
]
109957834 (taf5)
03036 Chromosome and associated proteins [BR:
malb03036
]
109957834 (taf5)
Transcription machinery [BR:
malb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109957834 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
109957834 (taf5)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109957834 (taf5)
STAGA complex
109957834 (taf5)
TFTC complex
109957834 (taf5)
SAGA complex
109957834 (taf5)
SLIK complex
109957834 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
Beta-prop_WDR19_1st
LisH_PAC1
WD40_like
LisH_TPL
VPS8_N
Motif
Other DBs
NCBI-GeneID:
109957834
NCBI-ProteinID:
XP_020451668
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MMLLCKHQSGDAISHCFFFLFSHLAHAHFILKMAAIQGGVVDAKEEKEIKTEPSNEVSGN
NNANDGRLLSASPAASAGSNKATAGAPEDQQTLLAVLQFLKKNNLTESVEILRREAGLPE
ESQDLKGADSSGTGATDAAASVDVEGVDTSSLLSRVTGSTSAGAPAPAKAGGDQPDVNVV
LSAYSQQGDPALYEVYYSSLKKFIETVLDCHRAELSQVFYPLFVHMYLELVYNNHENEAK
AFFGKFSGDQECYYEDDLRVLSSLTKKEHMKGNETLLDFRTSKFVLRISRDSYQLLKRHL
QERQNNQIWNIIQEHLYIDIFDGMPRSKNQIDATSGSLAGEARREATKTKVYYGLLKEPE
IELPLDDEDEEAENEEGKPKKKKPKKDSMGSKSKKQDPNAPSQNRIPLPELKDSDKLDKI
MYMKEATKKIRLGPDTLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTP
KKLRKVKSAADLNLIDKESDDVLERIMDEKTASESKILYGHSGPVYGISFSPDRNYLLSS
SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPHGYYFVSGGHDRVARLWATDHYQPLR
IFSGHLADITCTRFHPNSNYVATGSSDRTIRLWDVLNGNCVRIFTGHKGPIHALAFSPNG
KFLASGATDGRVLLWDIGHGLMVGELKGHTDTIASGSMDNTVRLWDAMKAFDDLETDDFT
AATGHINLQDNSQELLLGTYMTKSTPVIHLHFTRRNLLLSAGAYNP
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatgctactttgtaagcaccaatcaggtgacgcaatctctcattgtttcttttttctt
ttttcacatcttgcacatgcgcatttcattttgaaaatggcggccatacaaggtggtgtg
gtcgacgcgaaagaagaaaaagagatcaaaacagagccatcaaacgaagtcagtggaaat
aataatgcaaatgatggaagactgctttctgcgtctcccgctgcttcggctggaagtaac
aaagcaacggcgggagccccggaggaccagcagacgctgctggcggtcctgcagttcctg
aaaaagaacaatctgaccgagtccgtcgaaatcttgcgtcgtgaagcggggttgccggag
gagtcacaggatctgaaaggggccgactcctccgggacaggcgcaacagatgctgccgcc
agtgtggatgtagaaggcgtggatactagctctctgctcagccgtgtgaccggttcaacc
tccgccggagccccagcgccagccaaagctggcggtgatcagccagacgtcaacgtggtg
ctgtcagcttacagtcagcagggggacccggctttgtatgaggtctactacagcagcctg
aagaagttcatagaaacggttttggactgtcacagagctgaactgtcccaggtcttctac
cctctgtttgtccacatgtatctggagctggtgtacaacaatcatgaaaatgaggctaag
gctttttttgggaagtttagtggagatcaggagtgctattatgaagatgacttgcgtgtc
ctgtctagcctgaccaagaaagagcacatgaagggcaacgaaaccctgctggacttccgc
accagcaagtttgtcctgcgtatctcccgtgactcttaccagctgctgaagaggcacctg
caggagcgtcaaaacaaccagatctggaatatcatccaggaacacctctacattgacatt
tttgatggcatgccacgcagcaagaaccagattgatgccacgtctggcagtttggcagga
gaggccaggcgagaggccactaagacgaaggtttactatggattgctgaaggaaccggaa
attgagctacctctggacgatgaggacgaggaagcagagaatgaagagggtaaacccaag
aagaagaaacccaaaaaggatagtatgggttccaagagcaagaagcaggatcctaatgca
ccctcacagaataggatacctctgccagaacttaaggattcagacaagctggacaagatc
atgtacatgaaggaggccaccaagaagattcgcctgggaccagacaccctcccctctatc
tgcttctacacttttctcaatgcataccagggtctgactgcagtggacttcacagatgac
tccagcttgattgcaggaggctttgctgactccacggtgcgggtgtggagtgtcacaccg
aaaaaactccgcaaggtcaagtcggcagcagacttgaatctgattgacaaagagtcagat
gatgtgctggagaggatcatggatgagaagacggccagcgagtcaaagattctctacgga
cacagcggcccggtgtatggaatcagctttagccccgacagaaactacctcttgtcaagt
tctgaagatggtacagtcaggctgtggagtctccaaacatttacatgtttagtgggctac
aaaggtcacaactacccggtgtgggacacccagttttctccccatgggtactattttgtc
tctggtggacatgacagagttgcccgtctgtgggcgacagatcactaccagcctctacgg
atattttctggtcacctagctgacattacttgcacccgtttccaccccaactctaattat
gtggccacagggtcttctgaccgcaccatccgcctctgggacgtcctgaacggaaactgt
gtcagaatattcaccggtcataagggtcctatccatgcgctggctttctctcccaatgga
aaattcttggcttcaggagccaccgatggtagagttcttctctgggacattggtcatgga
ctgatggttggagagctcaaaggtcacacagataccattgcctccggctcaatggacaac
acagttcgtctgtgggatgcaatgaaagcgtttgatgatttagagactgatgacttcacg
gcagctacgggtcacattaatctacaggataactcccaggagcttctgctgggcacctac
atgacgaaatccacacctgtcatacaccttcacttcacccggaggaacctgcttctgtcc
gccggggcctacaatccataa
DBGET
integrated database retrieval system
