Monopterus albus (swamp eel): 109958632
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Entry
109958632 CDS
T05607
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109958632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109958632
03036 Chromosome and associated proteins [BR:
malb03036
]
109958632
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109958632
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109958632
mRNA degradation factors
5'-3' decay
Decapping complex
109958632
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109958632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
109958632
NCBI-ProteinID:
XP_020453091
UniProt:
A0A3Q3JJZ2
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MATARTENVGPVVMGLSKQNGQLRGQTKPTSVQPASTTQGKALGAPQKASSAPQDAGGIR
FGDDWKKSLKLPPKDNRVKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESI
PIALSGRDILARAKNGTGKSGAYLIPLVERIDLKKDHIQAIVMVPTRELALQVSQICIQI
SKHLGGVKVMATTGGTILRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKVQMMVMDE
ADKLLSQDFVVLIEDIIGFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLMEELTLK
GITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAK
MMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR
FGHLGLAINLITSEDRFNLKAIEDQLVTDIKPIPGSIDKSLYVAEYHSVGADSGMEEAEE
KPGRQQDST
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccagaacagaaaatgttggcccagtcgtcatgggactgagtaagcagaac
ggacagctcagaggacagaccaaaccaacttcagtccagcctgcatccacaactcaagga
aaggctttgggtgcaccccagaaagcaagcagtgcccctcaggatgcaggaggcatcagg
tttggagatgactggaaaaagagcctaaagctccctcccaaagacaacagggtcaaaacc
tcagatgtgacagccactaagggcaatgaatttgaagattattgtctcaaacgtgaactc
ctgatgggcatctttgaaatgggttgggagaaaccgtcccctatccaggaggagagcatt
cccattgccctgtctggacgggatattctggcccgggctaaaaatggaacagggaaaagt
ggagcctatctcatcccgctggtggagaggatagacctgaaaaaggaccacatacaggcc
attgttatggtacccactcgtgagctggcgctgcaggtgagccagatctgcatccagatc
agcaaacacctgggaggagtcaaagtcatggccaccaccgggggcaccatcctacgtgat
gacatcatgcgcctggatgagactgtgcacgtggtcattgccacacctggcaggatcctg
gacttaataaagaagggagtggcaaaggtggataaagtccagatgatggttatggatgag
gcggataagctgctgtctcaggactttgtggtgctcattgaggatatcattggcttcctg
gccaagaacagacagatcctgctttattctgcaaccttccccatcagtgtgcagaagttc
atggccaagcaccttcagaaaccctacgagataaacctgatggaggagctgactctgaag
ggcattactcagttctacgcctacgtcactgagaggcagaaagtccactgcctcaacaca
ctgttctccaggcttcagatcaaccagtcaatcatcttctgcaactccactcagagggtg
gagctgttggctaagaagatcactcagctgggctattcctgcttctatatccacgctaag
atgatgcaggaatatagaaaccgtgtattccatgacttcagaaacggactgtgcagaaac
ttggtctgcactgatctcttcactagaggtattgacatccaggctgtcaatgtagtcatc
aacttcgacttccctaagaacgctgagacttacctccatcgtatcggcagatcagggagg
tttggccacctgggcttggccataaacctcatcacatcagaggatcgcttcaacctgaag
gccattgaagaccagctggtcactgacatcaagcccattccaggcagcatcgacaagagc
ctctatgtggcagagtaccactcagtcggcgccgacagtggcatggaggaggccgaagaa
aaaccgggacgccaacaggacagcacctaa
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integrated database retrieval system
