Monopterus albus (swamp eel): 109958830
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Entry
109958830 CDS
T05607
Symbol
pold1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03030
DNA replication
malb03410
Base excision repair
malb03420
Nucleotide excision repair
malb03430
Mismatch repair
malb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109958830 (pold1)
03410 Base excision repair
109958830 (pold1)
03420 Nucleotide excision repair
109958830 (pold1)
03430 Mismatch repair
109958830 (pold1)
03440 Homologous recombination
109958830 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malb03032
]
109958830 (pold1)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109958830 (pold1)
Enzymes [BR:
malb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109958830 (pold1)
DNA replication proteins [BR:
malb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109958830 (pold1)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109958830 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
109958830 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
109958830
NCBI-ProteinID:
XP_020453413
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MDFKRRNGGPFKGGVSQAKRVRTAGEWEDSPSQFEEELSMLDEAEMETEEMEGQAGHDVI
PVGDLFSADLNPRWRRPPAHSLDPSSDTLVFQQIDLDYYLGEAVAGMPGQVQGKVPVIRM
FGVTDGGNSVCCHIHGFAPYFYVPAPSGFTSDHLGEFQRELNSAVLRDMRSNKDNISVTV
LAVDITRKESMYGYHGKRSLNFLRITMAMPRLIAPAKRLLEQGFKFGPYPIQSYQSYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSMAVIDSQYPGKVSLCQYEVDVAWTDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEPDKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKKLLESWAVFLRTVDPDIITGXXXXXXXXXXXXXXXPYLLNR
AAALKVNLFPYLGRVRGIKSVLRDLNFQSKQMGRRENKAINMEGRVQFDLLQVLLRDYKL
RSYTLNAVSFHFLQEQKEDVQHSIITDLQNGSEQTRRRLAVYCLKDAYLPLRLLQKLMCV
INYIEMARVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEP
EKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQKGSVEKLGLSPEEFTITPTRDLFVKS
SVRKGLLPEILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKVSANSVYGFTGAQVG
KLPCLEISQSVTGFGRHMIEKTKQLVESKYSISSGYQADAKVIYGDTDSVMVKLGVATVR
EAMAVGREAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGI
ETVRRDNCPLVANLINTCLQRILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTR
TAQEYAGKQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENN
IPIDTQYYLEQQLSKPLLRIFEPILGESKAESILLSGDHTRCRTVLTSKVGGLMAFAQKR
STCIGCRAVLKSDVAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDV
LCTSRDCPIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaagacgcaatggtggcccgtttaagggtggtgtgtcccaggccaaacgg
gtcagaacggctggtgaatgggaggacagtccatcacagtttgaagaggaattgtccatg
ttggatgaagcagagatggagacagaggagatggaggggcaggcaggccatgatgttatt
cctgtaggtgacctcttctcagcagaccttaaccctcgatggcgacggcctcctgcccat
tcactggacccatcatctgatacactggtgtttcagcagattgatcttgactattattta
ggagaggcagtggctggcatgcctggacaggtacaaggaaaagtgccagtcattcggatg
tttggtgtgacagacggtggcaacagtgtttgttgccacatccacggttttgcgccttat
ttctatgttcctgcaccaagtgggttcacatctgatcaccttggtgagtttcaaagagag
ctgaactctgctgtcctgagggacatgcgctccaataaggacaacatctccgtcactgtg
ttggctgtggacatcacccgaaaagagagcatgtatggttaccatgggaaacgcagcctg
aatttcttgcggataaccatggcgatgcctcgtcttattgcccctgcaaagagactgctg
gagcagggctttaagtttggaccgtaccccatccagagttaccagtcctacgaggccaat
atagattttgaaatcaggtttatggtggacagtgatgtggtgggatgctgctggattgaa
ctccccaaaggcaagtacagagtgcgtgaagagaagagcatggcggtcatagattctcag
tacccaggcaaggtgtccctgtgtcagtatgaggtggatgtggcgtggacagatttgata
agtcacccagcagagggagactggcagaggatcgcaccgctcagggtcctcagctttgac
attgaatgtgcaggaagaaaaggaatcttcccagaaccagacaaagatcctgtgattcag
atagcgtctatggtgcagcgtcagggtgagacagagcccttcattcgcacagtattcacc
cttcagtcctgcgccagcattgtgggctcacagatactgtgcttcacacaggagaaaaag
ctactggagagctgggctgtgtttttgaggacagttgacccagacatcatcactggannn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctacctgctcaacagg
gcagcagctttaaaggtgaatctgtttccctacttgggccgagtgcgaggcataaagtca
gttttacgagacctaaacttccagagcaagcagatgggccgtcgagagaacaaggcgata
aacatggagggccgggttcagtttgatctactgcaggtgctcctccgggactataaactg
cgctcatacacactaaacgctgttagtttccacttcctgcaagaacagaaggaggatgtg
cagcactccattatcactgatctgcagaatggcagtgaacagacacgtcgtcgtttggcg
gtctactgtctgaaagatgcctacctcccactgcgcctgttgcagaaactgatgtgtgtg
attaactacatagagatggccagggtgacaggcgtgcctctcacatacctgctctcaaga
ggacagcagatcaaagtggtgtctcagctgctgcgacaggccatgaaacaggacctggtc
atgcctgttgtaaagacagaaggaggagaggactacacaggggcgactgtcattgagcca
gagaaagggtattacagtgttcccattgcaaccttggatttctcctccttgtatccatcc
atcatgatggctcacaatctgtgctacaccaccctgctgcagaagggctcagtggagaaa
ctgggcctgtcaccagaggagtttaccattactccgaccagggatctgtttgtgaagagc
tctgtgaggaaaggacttctgccggagatcctagagaacctgctgtctgccagaaagagg
gccaaagcggagctgaagaaggaaacggaccctttcaagaaacaggtgctggacggtcgt
cagctggctctcaaagtcagtgcaaattctgtctatggcttcacaggggctcaggtgggc
aagctgccctgcctagagatctcacagagtgtcactggatttggaagacatatgatcgag
aaaaccaaacagttggtggagtccaagtacagcatttccagtggttaccaagctgatgcc
aaggtcatttatggggatacagattccgtcatggttaaactgggagttgcaacagtaaga
gaggccatggctgttgggagggaggcagcagaatgggtgtcctcccatttcacaccaccc
atcaaactggaatttgagaaggtgtactacccatacctgctaatcaacaagaagcgctac
gcaggcctgtatttctcctccagtgcagacacgcatgacaagatggactgtaaaggcatc
gagactgtccgcagagacaactgccctctggtggctaatcttatcaacacgtgtctacag
agaatcctcatagacagggatcctcagggtgctgtggctcatgccaaagaagtgatctca
gacctgctgtgcaaccgtatcgacatcagccagctggtcatcaccaaggagctgacacgc
actgcccaggagtacgctggcaaacaggcacacgtggagctggcagagaggatgagaaag
agagatgcaggtagcgcaccaaacctgggagacagagttccatatgtcatcatcaaggct
gcaaagggagtagcagcatacatgaagtcggaggacccgatctatgtgctggagaacaat
attcccattgacactcaatactacctggagcagcagctgtccaaacccctgctgcgaata
tttgagcccatcctgggagagagcaaggcagagagcatactgctcagtggcgaccacact
cgctgcaggacggtgctgacctcaaaggtgggaggcctcatggcattcgctcagaagagg
agcacctgcatcggctgcagagctgtgctcaagtctgatgtggctgtgtgtgatttctgt
aagaaaaaggaatctgaactgtatcagaaggagatctttcacctcaacaccctggaggag
cgtttctctcgcctatggactcagtgtcagcgttgtcaaggctccctccatgaggatgtg
ctctgtaccagccgggattgtcccatcttctacatgaggaaaaaggtccaaaaagatttg
gatgatcagagcaagttggtgtctcgctttgggtggtga
DBGET
integrated database retrieval system
