Monopterus albus (swamp eel): 109959330
Help
Entry
109959330 CDS
T05607
Symbol
lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109959330 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malb03400
]
109959330 (lig3)
Enzymes [BR:
malb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
109959330 (lig3)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
109959330 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
109959330
NCBI-ProteinID:
XP_020454233
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MQRRLLLLAPNTICVGLHPLCTLVRCHQLLKVFRVLPVFSCFEHLLPPVRAFRFPTEISN
FSSASQFSHNFVQNYPHQHFLHHCFSTEPDMADQRFLVEYAKRGTAGCKKCKDKIQKGIV
RIGKIVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDEDKDLI
NKHISDLMAKVSSSPKKKVQAKLNTSAQLMAPPADTSVNAPRKFSGFTAAKASTSGSSGT
QSSSPAKASQGSTLSAQLCDPQHKDCLFREYRKLCATVSENNSYNTKTQIIEKFLKKGSG
GDKFHGDLYLTVKLLLPGVIKNVYNLNDKQIVKLFSRIFKCNQDAMVRDLDQGDVSETVR
LFFEESKSFLPAAKSLLTIQEVDACLTRLAQLTKEDEQQTELEDIAKKCTSNDLKCIIRL
IKHDLKMNAGAKHVLDAVDPNAYDAFRASRNLGDVIDRVLRNQQEASSGSGPRKLLTVEA
SLMTPVQPMLAEACKSVEYAMKKCPKGMYSEIKYDGERVQVHKNGDNFSYFSRSLKPVLP
HKVAHFKDYIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDANVCLFVF
DCIYFNGVSLMERPLCERRKLLQDNMVEVPNRILFSEMKHITRAGDLADMITRVIREGLE
GLVLKDIKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGC
YDPDSKKWCTVTKCSGGYDDATLARLQKELDVIKISKDPSKIPGWLKIIKNYYPDFIIRD
PEQAPIWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKSATNLHQLRELYRISKEN
CDFQVTAGPSTSNDDKGSSGGDSGGNSPSSSSRGGGPPKKAGNSISPKPKVMKSQSRTPG
SETPSAKKVKKNENVHSNGQSKTKATSQLLEPRNDKTLLDIFSGVKLFLPVSVQDFDKLR
RYFVAYDGDLVPDYEATTATHTLAEPEDDSQAQRVTPGWIWECIRKRRVVPPC
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacgtcttcttttgttagctcccaacactatctgtgtaggcctacaccctctt
tgcactcttgtcaggtgtcatcagctcttgaaagtgtttagggtcttgcctgtcttttca
tgctttgaacatctacttccacctgttcgtgcattcaggtttcccacggaaatctctaat
ttttcctcagcatcgcagttttcccataatttcgtccagaattatcctcaccagcatttc
ctgcatcattgtttttccactgagccagatatggcagatcagaggttccttgtggaatat
gccaaacgtggtactgcaggttgtaagaaatgcaaggacaaaattcagaagggcatagtg
cggatagggaagattgtgccaaaccctttcagtgagtctgcaggggagatgaaagagtgg
tatcatgttaagtgtatatttgagaagctggaaagggcaagagccaccacgaagaagatt
gaggacatcacagatctggagggctgggaggagctacaggatgaagacaaggatctcatt
aataagcacatttcagacctgatggccaaagtcagttcaagtccaaagaagaaagtgcag
gccaaattgaacacctctgctcagctgatggctcctcctgctgatacatctgtcaacgct
ccacgcaaattttcaggattcactgctgcgaaggccagcacctccggcagctcaggaaca
caatcctcttcccctgccaaagccagtcaaggcagcaccctctctgcacagctttgtgac
cctcagcataaggattgcctcttcagagaatatcgcaaactctgtgccacggtgtcagaa
aacaacagctacaataccaagacacagattattgagaagtttctcaagaagggctcaggt
ggagataaattccatggagatctttatctgacagtgaagcttctcttgccgggcgtcata
aaaaatgtctacaacctcaatgacaaacagatcgtaaaactcttcagtcgcatattcaaa
tgcaaccaggatgccatggtgcgggatctggatcagggtgatgtgtctgagacagtgagg
ttgttcttcgaggagagtaaatcatttcttccggctgccaagagtctcctgaccatccag
gaagtggacgcatgcttgacccgtcttgcccagctgaccaaggaggatgagcagcagact
gaactggaggatattgccaaaaaatgcaccagtaatgacctgaaatgcatcattcgactt
atcaaacatgatttgaagatgaatgctggtgcaaaacatgtcttggatgctgtggatccg
aacgcttacgatgccttcagggcctcacgtaatctgggtgatgtgattgatcgggtgttg
aggaatcagcaggaggcatccagtggttcaggacccaggaaactcctcactgttgaggca
tcactcatgacccccgttcagcctatgttggcagaagcatgtaaatctgtggagtacgcc
atgaagaaatgccccaaaggaatgtactctgagattaagtatgatggagaacgtgtgcag
gtccataagaacggagacaacttcagctacttcagtcgcagcctcaaaccagtgttgccc
cacaaggtggcccatttcaaagactacattcctcaggcttttcccggtggccacagtatg
atactggatgctgaagtcctcctaattgacacaaagaccagtaaaccactgccctttggg
accttgggagtacacaagaaagcagcctttcaagatgccaacgtgtgcctttttgttttc
gactgtatctacttcaatggcgtgagcctcatggagaggcctctgtgtgaacgcaggaag
ctcctgcaagacaacatggtggaagtccccaacaggattctgttttcagagatgaaacac
atcactagggcaggagacctagctgatatgataactcgtgtcatcagagagggactcgaa
ggcctggtactgaaagacataaaaggcacctatgaaccagggaagcgccactggttgaaa
gtgaagaaggactatttgaatgaaggcgcaatggcagacacagctgacctggtcgtgctg
ggggccttctatggaaaaggctcaaatgggggcatcatgtccagttttctaatgggctgt
tatgacccggactccaagaaatggtgcacagtcaccaagtgctccggaggctatgacgac
gccaccttggccaggctccagaaggagctggatgtgatcaaaatcagcaaggacccaagc
aaaatcccaggctggttgaaaatcatcaagaactattatccagatttcattatccgtgat
cctgagcaagcaccgatctgggagatcacaggcgctgagttttccaaatcagaaatgcac
accgctgatggcatctccatccgctttcctcgcatgactcgcatccgtgatgacaaggac
tggaagagcgccaccaacttgcaccagcttagggagctgtaccgcatttctaaggagaac
tgtgactttcaagtgacagctggaccatctacatccaatgatgataagggctcatcagga
ggggacagcggaggaaactccccatcgtcgtcatcccgtggaggtggtcctcccaagaag
gccggcaacagtatttcacccaaacccaaggtgatgaaatcccagtctcgtactcctgga
tcagaaacacctagtgccaagaaggtgaagaagaatgaaaatgttcacagcaatggacaa
agcaaaacaaaggcaacctctcaactgctggagccaaggaatgacaagacactgttggac
atcttcagtggggtgaagctcttcctgccggtctcagtacaggactttgacaaactgaga
cgctactttgtggcatatgatggagaccttgtaccagactatgaagctaccacggccaca
catactctggctgaacctgaagacgacagccaggcccagagagttacacctggctggatc
tgggaatgtatccgcaagaggcgtgttgttcctccctgttaa
DBGET
integrated database retrieval system
