Monopterus albus (swamp eel): 109959678
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Entry
109959678 CDS
T05607
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
malb03036
]
109959678 (dicer1)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109959678 (dicer1)
microRNA pathway
RISC loading complex
109959678 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
dsrm
Motif
Other DBs
NCBI-GeneID:
109959678
NCBI-ProteinID:
XP_020454890
UniProt:
A0A3Q3J9E6
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGHYQGHAKRTVFLVNTASSVVQQAAAVRTHSDLQVGEYTDLEVT
SAWTDQQWSQQITENQVLVMTCHIFLYVLRNKTLPLSKINLVVFDDCHLAITDHPYCGIM
KLFEGCSCSPRILGLTASILNGKCDPSDLEQKIQNLERILKSNAETATDLVVLDRYASQP
REVVLDCGPYVDKSGISLRLEMELHEALHFLNDCNIPVTREDRDPTFISKQVLSDCRAVL
QVLGPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILREYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEAKERP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISCNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADSERTKAFEEDLATYKAIEKILRNKCSKSVEVGECEGEQVLDDDNI
LPPYVLRAEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVEMQDGCFQSTLYLP
INSPLRVPVKGPIMNCARLAEKAVALVCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYAVSAQTYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLTASQLDLITRLH
QYIFSHILRLEKPALEFKPVLADSAYCVLPLNVAGDSNTLDMDFTFMEDIEKSEARTGIP
TTQYTKQNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLELSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAIEAGVGAQTLPPDFR
YPNLDFGWKRSIDSKTFISCPESCSEDGEGHCKHQETVTPDPTSLTQPSSHHSSLPEQGP
HVVLEPGDATCTRNLTNGTALVTDCDDDSHQDEHLHQHDNCQCSQPSLPGLQSPESIQTT
TSVPVQPSHSLKKPSSSPPRPSDECTPGRTSDHKNKATSVCSWAAMGPSAPTTSCPDLFL
GPQHKSQAGDSSKSLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTY
PDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPCRMVVSIFDPPVNWLPPGYVVNQDKSSTE
KLDSEEAKEELLANGRSGNDYDEDDEEGEEVDEVSELMLKDEPKDEVNMEDDLEYYKEHI
KFIDNMLLGSGAFGKKISLNVFSPSLTPASGTSPTMESPYEWKAPKKSFQPSTAHYPSEP
APSGPSAEEFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGAELGKQSISYDLHTE
QCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLERGERTLTGAAVQSHQST
AIDLCYGWLKIPPRCMLDHPDAERTLSHLISGFENFERKINYTFQNKAYLLQAFTHASYH
YNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYD
YHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFE
SLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERT
YDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVQNN
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcttacagcttgtcacccctgctacttcacccatggggcctttctttggtctg
ccatggcagcaggaggctatacatgataacatctatactccaaggaaatatcaggtagaa
cttcttgaagcagctcttgaacataatactatcgtctgcttgaatactggctcagggaag
acctttattgcagtacttctaacaaaagagctctcccaccaaatccgtggacattatcaa
ggacatgcgaagaggactgtgtttctggtgaacacagcttcttctgtagttcagcaagca
gctgcagtcaggactcactctgaccttcaggtgggagagtacacagatttggaggtgacc
tcagcatggactgaccaacagtggagtcagcagataactgagaatcaggtgttggttatg
acctgccacatattcctgtatgttctgaggaataaaaccttaccattgtctaaaatcaac
ttggtggtttttgatgattgtcacctggccatcactgaccacccctactgtggaataatg
aagctatttgaaggctgttcatgcagtccccgcatcctgggtctcacagcctccattctg
aatggaaagtgtgatccatcagacctggagcagaagatccagaacctggagaggatcctg
aagagcaatgctgaaactgccactgaccttgtagtcctggacagatacgcctctcagcca
agggaagtggtgctggattgtggcccctatgtagataagagtggaatctccctgcgtctg
gagatggagctgcatgaagctctccacttcctgaatgactgtaacatacctgttactaga
gaggaccgtgatcccacattcatctccaaacaggtcctgagtgattgcagagctgtgctg
caggtgctggggccctggtgtgcagataaggcagcgggcatcatggtgcgggagcttcag
aagtacatcaaacatgagcaggaggagcttagccgtaagttcctgctgttcaccgacacc
atcctgcgcaaagtgcatgctctctgtgaggaacatttctcccccgcctcactggacctc
aagtttgtcacccccaaggtcctccggctgcttgagatcctgcgagaatacaagcctttt
gagcggcagcagtttgagagcgtggagtggtacaacaaccgtaaccaggacaactacgtg
tcttggagtgactcagaggatgaagatgaggatgaggaggtggaggccaaagagaggcct
gaagccaacttcccttcaccgttcaccaacatcctgtgtgggatcatctttgtggagagg
cgttacacagctgttgtcctcaatcgtcttatcaaagaggcaggaaagcaggatccagag
ctggcttacatcagctgcaacttcatcactggccacagcatcggcaaaaaccagccacgg
aacaagcagatggaggtggagttccggaaacaagaggaggttcttcgcaaattccgggcc
catgaaaccaacctgctgatcgccaccagcattgtggaggaaggtgtggatatcccaaag
tgtaatctggtggtgcggtttgacctacccacagagtacagatcctatgtccagtccaaa
ggcagagctcgggcacctgtctccaactacatcatgctagccgacagtgagaggaccaaa
gctttcgaggaagatctcgctacctacaaggccatagagaagatcttgaggaacaaatgt
tccaagtccgtggaggtgggtgagtgtgaaggagagcaagtgctggatgatgacaatatc
ctcccaccatatgtgcttcgagctgaggatggaggtccccgggtcaccatcaatacagcc
attggacacattaacaggtattgtgctcggctacccagtgacccattcactcacttagca
cccaaatgtaaaactgtggaaatgcaagatgggtgcttccagtccacactctacttaccc
atcaactcccctctgcgtgttcctgttaagggtcctataatgaactgtgccagactggca
gagaaagcagttgcactagtatgctgtgagaaactccacaaaataggtgagctggatgat
cacctgatgccagtggggaaagaaactgtcaagtatgaggaagagctggaccttcacgat
gaggaggagacgagcgttcctggccggcctggttctaccaagaggaggcagtgctaccct
aaagccatacctgagtgtctgcgagacagttatgctgtatccgcacagacttactaccta
tatgtgattgggatggtcctcaccactcctctgcctgatgagctcaacttccgcagaagg
aagctctacccaccggaggataccaccaggtgcttcggcatcctgactgccaaacccata
cctcgaatcccccatttcccagtgtacactcgctcaggtgaggtgaccatctccattgag
ctgcagaagtctggcttcacactcaccgcctcacagcttgacctcatcacccgcctgcac
caatacatcttctcccacattctccgcctggagaaacctgcactggagttcaagcctgtg
ctggctgactcagcttactgtgttctacctctgaatgttgctggggactcaaacacacta
gatatggattttacattcatggaggacattgagaagtctgaggctcgaactggcattcct
accactcaatacaccaagcagaaccccttcatcttcaagctggaggactaccaggatgct
gttatcattccaaggtatcgtaactttgaccagcctcatcgcttttatgtcgctgatgtg
tacacagacctgacgccactcagcaagttcccttcaccagaatacgagacatttgctgag
tactacaaaaccaagtacaatctggagctgtccaacctgaaccaaccactgctggatgta
gaccacacctcctccagattgaacctattgacccctcgacacctgaaccagaaagggaaa
gctctaccactcagcagtgcagagaagaggaaggccaagtgggagagtctgcagaacaaa
cagatcctggtcccagagctgtgtgccattcatcctatccctgcctccttgtggaggaaa
gcagtctgtctgcccagcatcctctaccgtctccactgcctcctgaccgccgaggagctc
agagctcagacagccattgaagctggagtgggagcacagacccttccccctgacttcagg
tatccaaacctggacttcggctggaagagatctattgacagcaaaacattcatctcctgt
cctgagtcctgcagcgaggatggtgagggtcactgtaagcatcaagagactgtaacccct
gaccccacttccctgacccagcccagtagtcaccactcgtccctgcctgagcaggggccc
cacgtggtccttgagcctggagacgccacctgcaccagaaatctaactaatggcactgcc
ctagtcactgactgtgatgacgacagtcaccaagacgagcaccttcaccaacatgacaat
tgccaatgctcccagcccagtttacctgggctacagagccctgaatcaatacaaaccact
acctcagttcctgtgcagccctctcacagcttgaagaagcccagctccagtcctccacgg
cctagtgatgaatgtacaccagggaggacctcagaccacaaaaataaagctacctcagtc
tgcagctgggcagccatgggtcccagtgctcccacaacatcttgtcctgatcttttcctt
ggcccccaacacaaatcccaggctggagactcctccaaaagcctggggcccaatccaggc
ctcatcctgcaagccttgaccctatcaaacgccagtgatggcttcaacctggagcggctt
gagatgctcggtgactcttttcttaagcatgccatcaccacatacctgttttgtacttac
cctgatgctcacgagggacgactcagctatatgcgcagcaagaaggtgagcaactgtaac
ctgtaccgtttggggaagaagaaggggctcccctgcaggatggtggtgtccatcttcgac
ccccctgttaactggctgccccctggctatgtggtcaaccaggacaagagcagcaccgaa
aaactggattcagaggaggccaaagaggagcttctggccaatgggcgatctgggaacgac
tatgatgaggatgatgaggagggtgaggaggtggacgaggttagtgagctgatgttaaag
gacgagccaaaggatgaggtcaacatggaggatgatttggagtactacaaagagcacatc
aagttcattgacaacatgttgttgggatctggtgcgtttggtaagaagatctctctgaac
gtcttctctccctctctgaccccggcctcgggtacttcccctactatggagtctccatat
gaatggaaggctcccaaaaagtccttccagcccagcacagcccattacccctcggagcca
gcacccagtgggccctcggctgaggagtttgactatagctcttgggacgccatgtgctac
ttggaccccagcaaggccggagaggaggatgactttgtggtgggtttttggaatccatcg
gaggagaactgtggcgcagagctgggcaagcagtcaatctcctatgatctgcacacagag
cagtgcattgcagacaagagcatcgctgactgtgtggaggctctgctgggctgctacctg
accagctgtggggagagagccgcccagatgttcctctgctctttgggcctcaaggtgttg
ccactggagagaggagagaggaccctgacaggagcagcagtgcagagccatcagagcaca
gccattgacctgtgctacggctggctcaagatcccaccccgctgcatgctggaccatcca
gacgcagagcgaaccctcagccacctcatttctggctttgagaactttgaaagaaaaatc
aactacacctttcagaacaaggcttacctcctgcaagccttcacccacgcttcctatcat
tataacaccattacagattgttaccagcgcctggagtttcttggtgatgcaattctagac
tacctcataacgaagcacctttatgaagatccacggcagcactctcctggtgtgctgacc
gacctgcgctcagcacttgtcaataacaccatctttgcctctctggctgtcaagtacgac
taccataagtacttcaaggccatctcacctgagcttttccacgttattgacgactttgtg
cagtttcagctggagaagaatgagatgcaaggcatggactctgagctgcggcgctctgaa
gaagatgaggaaaaggaggaggacattgaggtccctaaggccatgggggatatctttgag
tcactagctggagcaatttacatggacagcaggatgtcgttggagacagtgtggcaagtg
tattatccaatgatgaggccacttatagagaaattctcggccaatgtgccacgctctcct
gtgagggagctgcttgagatggaaccagaaactgccaagttcagccctgcagagagaacg
tacgatgggaaggtccgtgtgacggtagaagtcgttggtaaaggcaaatttaaaggagtt
ggccgcagctatcgcatcgccaagtcagcagcggcacgacgagctttgcgcagcctcaaa
gccaatcaacctcaggtccaaaacaactga
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integrated database retrieval system
