Monopterus albus (swamp eel): 109960159
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Entry
109960159 CDS
T05607
Symbol
pan3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109960159 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109960159 (pan3)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109960159 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
109960159 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Pkinase
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
109960159
NCBI-ProteinID:
XP_020455715
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MNSGLPASTASLGGAGIPNVKVKFCRYYAKDKTCFYGDECQFLHEDPSMASLPLHVGGGS
PVPLSMAAGGGTPAGYSLGGSAAACPGGAGTGASKKSETLGPAGTSLEGQLLTIPGMESA
TMSDANLTNSYFSSSFIGVNGFGSPAESKYSMMQRMTTSSSSPSLLNDGAKNFSHSSHDS
VNPSTSSLFSDFGALSISQRRKTPNPAASEFIPKGAPRMATMAQSTVQAFPSPLFPHPGL
SSSTAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTTASDQGTHII
QKETVGGTTYFYTDNTPAPMAGMVFPTYHIYPPIAPHVAYMQPKANAPSFFMADELRQEL
INRHLITMAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFSYITSCYKAVNSK
DDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNSVTLREVFTTKAFGDHSLVFSYDFYA
GAETMFRRHFNNPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHT
AGLACRVMDPSKILITGKTRLRLNCVGVFDVLTFDNSQNNHLALMPQYQQADLVSLGKVV
LALACNSMAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSVNDIMPMIGARFY
TQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLF
RDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFDS
TFQELQAAASGSL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggactcccagcgtcaactgcttcgctcgggggtgccgggatacccaatgtc
aaggtgaagttttgcagatattacgcgaaagataaaacgtgcttttatggagacgagtgt
cagtttctgcatgaggatccgtctatggcaagcctcccgctgcacgttggcggcggtagc
ccagtcccgttgtccatggccgcgggtggcgggacgccagcggggtattccctcggtggc
tccgcggctgcctgcccgggcggcgcggggaccggtgcctctaagaagagcgaaacattg
ggccctgcaggcacgtccttggaggggcagctgttaaccatcccaggaatggagagtgca
accatgagtgatgccaatcttaccaactcttacttcagcagcagttttattggggtcaat
gggtttggaagcccagcggagtctaaatactcaatgatgcagcgaatgactaccagcagc
agctctcccagtctcctcaacgatggtgccaagaacttcagccacagcagtcatgattca
gtgaacccctcaacatcctcactgttcagtgattttggtgctcttagcatttcccaaagg
agaaagactccaaacccggcagcaagcgagttcatccctaaaggagctccacgtatggcc
actatggctcagtccactgtccaggccttcccctcacctctcttcccacatcctggtctt
agcagctctacagctgctgcactggctccaggcatgtctttgtctgcggggtcttctcct
cttcactccccaaaaattacaccgcacacctcacccgctcctcgtcggcgcagtcacacc
ccaaaccctgctaactacatggtgcccactactgcatctgaccagggcacacacatcatc
cagaaagagactgtaggagggaccacctacttctacacagacaacaccccagcacccatg
gctgggatggtgtttcctacctaccacatctatccccccattgcgccccatgtggcatac
atgcaaccaaaagctaatgctccgtccttcttcatggctgatgagctccgacaggagttg
ataaacagacatttgataaccatggcccagattgatcactcagagaacccagatgtacca
tctgaggtggatagttaccacagcttattcccccttgagcctcttcccccaccaaaccgc
atgcagaagaccagcaacttcagctacatcacctcctgctacaaggccgtcaacagcaag
gatgacctgccctactgcctaaggaggatacatggtttccgccttgttaacacaaagtgc
atgatgttggtggacatgtggaagaagatccagcactcaaactctgtaacactgagggag
gtctttaccaccaaggcctttggagaccactcattggtgttctcttatgacttctatgcg
ggtgcagaaaccatgttccgcaggcatttcaataaccccgcagcagactcgtacttcacc
aagaggaaatggggacaacatgagccccccccgccacggcagcatgcaggtctgcttcct
gagtctcttatctgggcctatattgtccagctcagctcggccctgcgcaccattcacact
gccggcctggcctgtcgtgttatggaccccagcaagattctcattactggaaagaccagg
ttacggttgaactgtgtcggagtgtttgatgtcttaacatttgacaacagtcagaataat
catcttgctctaatgccacagtatcagcaagcagacctagtgtcgctgggaaaggtggtg
ctggcattggcgtgcaactccatggctggcattcaaagagaaaaccttcagaaggccatg
gagctggtgtctatcaactactcttctgacctgaagaacctcattctgtatctgctgacc
gaacagtctcgcctacgcagtgtcaatgacataatgccaatgattggagcccggttctac
acacaactggatgcagcgcagatgaggaatgatgtcattgaagaggaccttgccaaggag
gtgcaaaacggccgtctgttcaggctgttggccaagctgggaaccatcaacgagcggcca
gaatttcagaaggacccaacatggtcagagacaggtgaccgctacctgttgaagcttttt
cgagatcacctgtttcaccaagtaacagaagctgggacaccttggattgacctcagccac
attgtctcctgcctcaacaaactggacgcaggcgttcctgagaagattagcctggtgtct
cgggatgagaaaagtgtcctggttgtgacctactcggacctgaagcgctgttttgacagt
accttccaagagctgcaggctgctgcctccggctctctgtag
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