Monopterus albus (swamp eel): 109960215
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Entry
109960215 CDS
T05607
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109960215 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109960215 (prpf8)
Spliceosome [BR:
malb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109960215 (prpf8)
Complex C
U5 SnRNP specific factors
109960215 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
109960215
NCBI-ProteinID:
XP_020455800
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPAAMPPGVPPPAPVPDFMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDSSVVEWFYEHQPLKDNAKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIAMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMFS
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccttcccctacaggggggtccctgcagccatgccacctggtgtaccccct
cctgcaccagtcccggacttcatgtcggaggagaagctgcaagagaaagcaagaaaatgg
cagcagttgcaggcaaagcgctactcagaaaagcgaaagtttggctttgtggatgctcag
aaggaagacatgccccctgaacatgttcgcaagatcattagggaccatggagacatgacc
aatagaaagtttcgccatgacaagagggtctaccttggtgccctcaaatacatgccacat
gcagtgctgaagctgctggagaacatgcctatgccttgggaacagattcgagatgtacct
gtcctctaccacatcactggagctatttcttttgtgaatgaaatcccttgggtaatagaa
ccagtctacattgcgcagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgac
cgtcgtcacttcaagcgtatgcgctttccaccatttgatgatgaggagccgccactagac
tacgctgacaacatccttgatgtggaaccactagaggccattcagatggagctggaccct
gaggaggactcttctgttgtggagtggttctatgagcaccagcccctcaaagataatgcc
aagtttgtgaatggcaccacctaccgtcgctggcagttcacgctgcccatgatgtccaca
ctgtaccgtctggccaatcaacttctgacagacctggtggatttcaattacttttatctg
tttgacctcaaggctttctttacctccaaagctttaaatatggccatccctggggggccg
aagtttgagccactggtcagggacatcaaccttcaagatgaagactggaatgagttcaat
gacatcaacaaaatcatcattcgacaacccatcagaacagagtacaaaattgccttcccc
tacctgtacaacaacttgccacaccatgtccacctcacctggtaccacacacccaacgtt
gtgtttatcaagacagaggatccagatcttccagcattctactttgacccactgatcaac
cccatctcacacagacattctgtcaagagccaggagcctctgcctgatgacgatgaggag
tttgagcttcctgagtttgtggagccctttctcaaagagaccccactctacacagacaac
acagctaatggtattgctctgctgtgggcaccaagacccttcaacctacgatctggccgc
acaaggcgtgccattgatatccccctgatcaaaaactggtatcgagagcactgccctgca
ggacagccagtgaaagtgcgtgtgtcataccagaaactgttgaagtactatgtcctcaat
gctctcaaacacagaccacccaaggcacagaagaagaggtatctgttccgttccttcaag
gccacaaagttctttcagtccaccaagctggactgggtggaggtgggcttgcaggtgtgc
agacagggctacaacatgctcaacctgctcattcaccgtaagaacctcaactacctgcat
cttgactacaacttcaacctgaagcctgtcaagacactgaccacaaaggagcgaaagaag
tcccgattcggcaatgccttccatctgtgtagagaggtgctgcgtctcagtaagctggtg
gttgacagccatgtgcagtacagactgggaaatgtcgatgccttccagctgtccgacggg
ctgcagtacatttttgctcatgtgggtcagctgacaggcatgtaccgctacaagtataag
ttgatgaggcaaatccgaatgtgcaaagacctgaagcatctgatctactaccggttcaac
actggtcctgtgggcaaaggtccaggttgtggcttctgggcccctggctggagagtgtgg
ctgttcttcatgaggggcattactccgctgttggagaggtggctggggaatctgctggcc
aggcagtttgaaggacgtcactccaagggcgtagccaagaccgtgaccaaacagcgcgtg
gagtcgcactttgacctggagctgcgtgctgcggtgatgcatgacattttggacatgatg
cctgagggtatcaaacaaaacaaggccaggaccatcctacagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgccaggcctgcccactcccattgagaac
atgatcctgcgttatgtgaaggccaaggctgactggtggaccaacacagcccactacaat
cgtgagagaatccgtcgtggagccactgtggataagactgtgtgcaagaagaacctgggc
agactgacccgtttgtacctgaaagctgagcaggagagacagcacaactacctgaaggac
ggcccctacatcacagctgaagaggcagtagccatttacaccaccaccgtgcactggctg
gagagtcggcggttctcgcccattcccttccctccactgtcatacaaacatgacaccaag
ctgctgatcctggctttggagaggctcaaagaggcttacagtgtcaagtcacgtctgaac
cagagtcagagggaggagctgggactgatagagcaggcttatgacaatcctcacgaggcc
ctttccaggatcaaacgtcacctgctcacccagagagccttcaaagaggtgggtattgag
ttcatggacttgtatagccacttggtgcctgtgtatgacgtggagcccctggagaagatc
actgatgcctatctggaccaatacctatggtacgaggcagacaagagacgcctgttccca
ccctggattaaacctgctgacactgaaccaccaccactgctggtctacaagtggtgccaa
ggcatcaacaatttgcaggacgtgtgggagactgcagagggcgagtgcaatgtgatgctg
gaatcccgctatgagaagatgtatgagaagattgatctgacattgctcaacaggctgctg
cgtctcattgtcgaccacaacattgctgattacatgacagccaagaacaatgtggtcatc
aactacaaagacatgaaccacaccaactcctatggcatcatcagggggctccagtttgcc
tcattcattgtacagtactatggcctggtgatggacctgctggtgcttggcttacatcgt
gccagtgagatggctggcccgcctcagatgccaaacgacttcctcagtttccaagacaca
gccacggagagtgcccatccgatccggctgtactgccgctatatcgaccgtatccacatc
ttcttcaggttctctgctgatgaggccagggacctgattcagaggtatctcacggagcac
ccagaccccaacaatgagaacattgtgggttacaacaataagaagtgctggcctcgtgat
gcccgcatgaggctgatgaagcacgatgtcaaccttggacgtgctgtgttctgggacatc
aagaaccgcctccccaggtcagtgaccacggtccagtgggagaacagctttgtgtcagtc
tacagcaaagacaaccctaacctgctcttcaacatgtgtggcttcgagtgccgcatcctt
cccaagtgccgtaccagctatgaggagtttactcacaaggatggtgtgtggaacctacag
aacgaggtaacaaaggagaggacagcacaatgtttcctacgtgtggatgatgaatcgatg
cagcgcttccacaacagagtgcgtcagatcctgatggcctctggatctaccacattcaca
aagattgtgaacaaatggaacactgctctaattggcttgatgacgtacttccgtgaagca
gtggtcaatacccaggagctcctggacctgctggtgaagtgtgagaacaagatccagaca
cgtatcaagatcggccttaactccaaaatgcctagccgcttccccccagtggtcttctac
actcccaaagagttgggcgggcttggtatgttgtcaatgggccacgtactaatcccacag
tcagacctgcggtggtccaagcagacagatgtgggcatcacccatttcagatctggaatg
agtcatgaggaggaccagctgattcctaacctgtatcgttacattcagccatgggagagt
gagttcattgactcccagagggtttgggctgagtacgctctcaagagacaagaagccatc
gctcagaacaggcgtctcaccctggaggatttggaggactcgtgggacagaggaatcccc
cgtatcaacacacttttccagaaggacagacacacactggcttatgacaaaggctggcga
gtcaggacagacttcaagcagtaccaggtgctgaagcagaacccgttctggtggacccac
cagagacacgatggcaaattgtggaacctgaacaactaccgcacagacatgatccaggcc
ctgggtggtgtggagggaatcctggagcacacactcttcaaaggaacctactttcccacc
tgggagggtctcttctgggagaaggccagcggctttgaggagtccatgaagtggaagaag
ctgacaaatgcccagaggtctggtctgaaccaaatccccaatcgtcgcttcacactttgg
tggtcacccaccatcaacagagccaatgtgtacgtgggtttccaagtgcaacttgacttg
actggaatctttatgcacggcaagatccccacgctgaagatctctctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcattgtcatggatctttgtcaggtgttt
gatcaggagctagatgctctggagattgagacagtgcagaaagagaccatccaccccagg
aagtcgtacaagatgaactcgtcctgtgcagacattctcctgtttgcatcctacaagtgg
aacgtttctcgtccgtcgctgcttgccgactcaaaggacgtgatggacagcaccaccaca
caaaagtactggattgacattcagctccgctggggtgactacgattcacatgacattgag
cgctacgccagggccaagttcctggactacaccacagacaacatgagtatctacccctcc
cccaccggggtgctcattgctattgacctggcttacaaccttcacagtgcctatggtaac
tggttccctgggagcaagcctctgatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtatgtgctcagggagcgcatccgcaaaggtctgcagctgtactcttcagag
cccacagagccctacctgtcctcacagaactatggtgaactcttctccaaccagatcatc
tggtttgtggatgacaccaatgtctacagagtcaccatccacaagacctttgagggtaac
ttgaccacaaagcccatcaacggagctattttcatcttcaaccccaggactggtcagctc
ttcctcaagatcattcacacatctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgccctgattcgctccctccctgtggaagagcag
ccaaaacagattattgtaacaaggaaaggcatgctggaccctctggaggtccacttgctc
gacttccccaacattgtgattaagggctctgagttgcagctgcccttccaggcctgtctg
aaggtggagaagtttggagacctgattctgaaggctacagagcctcagatggtgctgttc
aacctctacgatgactggctcaagaccatctcatcttacacagccttctcccggctcatc
ctcatcctcagagcgctccacgtcaacaatgacagagccaaggtgatcctgaaacctgac
aagacaactatcactgagccccatcacatctggcccaccctcacagacgaggagtggatc
aaagtggaagtgcaactcaaggatctcattctggcagattatggcaaaaagaacaatgtg
aacgtagcctcactgacccagtccgagatccgtgacatcatcctgggtatggagatctca
gctccatcacaacagcggcagcaaatcgctgagattgagaagcagaccaaagaacagtca
cagctcaccgccacgcagacccgcactgtcaataagcatggtgacgagattatcacctca
acgacctccaactatgagacccagaccttctcctccaagactgagtggagagtcagggcc
atatctgccgccaacctccatctccgaaccaaccacatctatgtgtcatctgatgacatc
aaagagacgggctacacctacatcctgcccaagaacgtcctcaagaaattcatctgcatc
tcagatctacgagcacagattgccggctacctgtatggcactagcccacctgacaacccg
caggtgaaggagatccgttgtattgccatggtgcctcagtggggaacccaccagactgtt
cacctgcccaaccagctgcctggtcatgaatacctcaaggaaatggagcccctgggctgg
atccacacccagcctaacgagtcacctcagctgtccccacaggatgtcactacccatgcc
aagatcatggctgacaacccttcatgggatggagaaaagaccatcatcatcacctgcagc
ttcactccaggctcatgcacgctcacagcctacaagctgacacccagtggctatgagtgg
ggtcgccagaacacagataagggcaacaaccctaaaggctacctgccatcccactatgag
agagtgcagatgctgctctctgatcgcttccttggcttcttcatggtgccaggacaagtc
tcctggaactacaacttcatgggtgtgcgccacgatcccaacatgaagtacgacttgcag
ctggccaaccccaaagagttctaccatgaagtccaccggccttcgcacttcctaaacttc
gcctcattgcaggagggtgagatctacaacgctgaccgcgaagacatgttttcttaa
DBGET
integrated database retrieval system
