Monopterus albus (swamp eel): 109960557
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Entry
109960557 CDS
T05607
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
malb04147
]
109960557
00535 Proteoglycans [BR:
malb00535
]
109960557
00536 Glycosaminoglycan binding proteins [BR:
malb00536
]
109960557
Exosome [BR:
malb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109960557
Proteoglycans [BR:
malb00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109960557
Glycosaminoglycan binding proteins [BR:
malb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109960557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
109960557
NCBI-ProteinID:
XP_020456396
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MRRRDRWSILSSIFILLVVTRTKPQRREDSGISLLQLIGDPPPDEIIRVSGPRDEAAFLF
TSAAASGQPVLAHVPSPFYRHFSLLFHLKPSTPAASVLFSITDGPQKLIYIGVKLSAVQS
GRQKVQFFYTEPDAEASYEAASFDVPSLVNTWSRFSLSVFEDRVTLYQGCDSEPQVVKFE
RSPDLMEFDAGAGIFVGQAGGADTDKFKGEIAELRLVGNPQAAERLCDDEDDSDAASGDF
GSGEDDRRQTGHTVKTTPASFRPAPEPPLTSSQKDSLKESDDRYLQLSVDYSQSGSPGPK
AGVSGAKGDKGDKGEKGSKGDRGPAGPKGDSRSGFGSGVSSQGERGQKGEKGAKGIGYPG
NKGERGAQGPPGPPGPPGPAAEVVRLGDGSAVQHVAGPPGPPGLPGADGAAGPPGADGEP
GDPGEDGKAGHAGPQGPPGNPGHKGQKGERGEGQPGPRGRPGPPGPPGPGTGDRPTFVDM
EGSGFPDLDKVWGPRGPPGPPGPPGPPGIPGTSVALGDNGSVAFGPPGPPGQDGVPGLPG
PPGHPGAPGQPGPRGEKGDCGELGLPGAAGQKQDTQDSSFLTGLFSYFTPSSVGAQGDPG
QTGTAGQTGLAGLPGPMGPVGPPGPPGPPGPPYHTGLSDNDGYDVIAGPPGPQGPRGTAG
LPGQPGLPGNFGEKGAEGPRGPPGLPGLDGIPGPPGEKGERGAKGETGMPGRDGGPPGPP
GPPGPPGQIVYQTTGDYNDIYWSEGWQEGASLPGRAGFPGPMGPKGDKGDSGPPGYAPKG
QKGEPGIILGPDGTPLYLGALAGQPGEKGPPGPVGPPGSYGPPGHKGEIGLPGRPGRPGL
NGAKGAKGDASIGSGYGYPGPPGPPGPPGPPGPTVPVDRLGGNEDYSRYHPAMKGEKGDL
GPPGRPGIGSDFDLYTLKNELKGEMGSPGLKGEKGEPGGGYYDPRYGGSGVGASGVPGPP
GPKGDSIIGPPGPQGPPGPPGRSYDGPPGPPGPPGPPGPSLPGAHRGTQTISIPGPPGPP
GPPGLPGYSSGVTVLRSYDTMTATARIQPEGSLVYIIDQTDLYLRVRDGVRQVKLGSYIA
LPSEDGNEVAAVEPPPVIPYYPDHSSQSQPASPVHPSSGHQSEPDPYYPQYPSNPDPRYH
PDSQYHPDPRYPAPTNPRFPSYGDRLNQPDGRYFVHTAQERPAYPDTRYTVTPQRRPPPP
VPQTPVHHHTSGPGLHLIAMNSPQTGSMKGIRGADFLCFSQAQAVGMKGTFRAFLSARLQ
DLYSIVHKTDRDHLPIVNLKDEVLFDSWDAIFSGGRMKDSVTIYSFDGKDVLSDSTWPEK
MVWHGSNSAGQHHIDNFCETWRVGDPVVTGMASSLQSGSLLQQSSSSCSSSYVVLCIENS
YTGQSRR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgacgcgacaggtggtcgatattgagctccatcttcatcctgttggtggtcaca
cggacaaaaccacagcgaagagaggatagtggcatctctttgctccagctgattggggac
ccccctccagatgaaatcatcagggtttcagggccgagggatgaggctgctttcctcttc
acctctgctgcagcgtcgggccagcccgttctggcccatgtccctagccctttctaccgc
cacttctccctcctcttccacctcaagccctccacccccgctgcctctgtcctcttctct
attactgatgggccccagaagctcatctacattggtgtcaagctcagtgctgtgcagtcc
ggtcgtcagaaggtgcagttcttttacaccgaacctgacgctgaggcctcatatgaggca
gccagctttgatgtgcccagtctggtgaacacctggagtcgcttctcgttgtctgttttt
gaggatcgggtgactttgtaccaaggctgtgactctgagccacaggtggtgaagtttgag
cgctccccagatttgatggagttcgatgccggagcagggatctttgtgggtcaggctgga
ggagctgacactgataagttcaagggtgagatcgcagagctgcgactggtgggaaaccct
caggcagctgagcgtttgtgtgatgatgaggacgactctgatgctgcctctggtgacttt
ggcagcggtgaagatgacaggagacagacaggacacactgtgaagaccacccctgcatcc
ttccgtccagcgcctgaaccaccactgacatcctcacaaaaggacagcctcaaagaatca
gatgacaggtatctgcagctgtcagtggactacagccagtctggatcaccaggcccaaaa
gcaggtgtcagcggtgctaaaggtgacaaaggtgacaaaggagagaaaggttcaaagggg
gacagaggccccgcaggaccaaagggagattcaaggtctggctttggctctggtgtgtcc
tcccagggtgaacgagggcaaaagggtgaaaagggagcaaagggcattggatatccaggc
aataagggagagcgtggggctcaggggcctcccgggcctcctggtcctccaggacctgcg
gctgaagtagtccgactgggggatggctctgctgtgcaacacgtggcaggaccccctgga
cctccagggctaccgggggcagatggggctgcaggacctccaggggccgatggggagcct
ggtgatccaggagaagatggaaaagctggtcatgctgggccacaaggccctcctggtaat
cctggacataaaggccaaaagggggaaagaggagagggtcaacctggacccagaggccgc
ccaggtccaccaggacctcctggacctggcactggtgaccgtccaacctttgttgacatg
gaaggctcaggattccctgacctggacaaagtttggggtccccgtggtcctcccggcccc
ccgggccctcctggcccccctgggatccctgggacttcagtggccctgggagacaacggt
tcagttgcctttggacctcctggaccacctggacaagatggagtccctggtttaccaggc
cctcctggtcatcctggtgcacctggtcagcctggacccagaggagagaagggtgactgt
ggtgagctcggtcttccaggagcagccgggcaaaagcaagacacacaagactccagcttt
ctcaccggcctcttctcttactttacgccttcctctgtgggtgctcagggtgacccagga
cagacgggtaccgcagggcagaccgggctagcagggcttccagggccaatgggaccagtt
ggacctccaggacctcctggaccaccagggccaccttaccacactggccttagtgacaat
gatggatatgatgtgatcgccggcccacctggaccacagggtccacgtggtactgcaggt
ctacctggccagccaggtttgccgggcaactttggagaaaaaggagcagaggggccacga
ggaccacctgggctcccaggcctggacgggatccctggaccgccgggtgaaaagggtgaa
agaggagcgaaaggagagacgggtatgccaggacgagatggcggaccacctggacctcca
gggcctcccgggcccccaggacagattgtctaccagacaacaggagattataatgacata
tattggagcgaagggtggcaggaaggagctagtcttccaggccgagcaggattcccaggg
cccatgggaccaaaaggagataaaggagattcaggtcctccaggatatgcaccaaaggga
cagaaaggagagcctggtatcatcctggggcctgatgggactcctttgtacctgggtgcc
ctggcaggacagccgggtgagaagggacctcctggcccagtgggacctccaggttcatac
ggtcctccaggccataagggagagattgggcttccagggagaccgggtcgtccggggctg
aatggcgccaaaggagcgaagggagatgcaagcattggatctggatatggttaccctggt
cctccaggtccaccgggccctcctggacctcctggacccactgttcctgttgacagactc
ggagggaatgaggattactccaggtatcaccccgctatgaaaggagagaaaggtgatctt
ggaccaccggggcgtccaggtatcgggtcagactttgacctttacactttaaagaatgag
ctgaaaggtgaaatgggcagtccaggcttgaaaggagagaaaggagaaccgggtggagga
tattacgatccccgctatggagggagtggagtcggagcctcaggagtgcctggacctcct
ggccctaaaggtgactccatcattggcccaccaggccctcaggggccaccaggtccacca
ggaagaagctatgatggcccacctggaccaccagggccacctggacctccaggaccatct
ttacctggtgctcacagaggcacacagactatcagtattcctggaccaccgggaccacct
ggacctccagggctacctggatactcctcaggggtgacagtgttgagatcttatgacacc
atgacagccactgctagaatacaacctgagggctctctggtgtacatcatagaccaaaca
gatctctacttacgggtcagagatggagtccggcaagtcaagcttgggagttacattgct
ttgcccagtgaggatggtaatgaggttgcagctgtggagcccccaccagtcattccttac
tacccagaccacagctctcaaagccaacctgccagtccagtccacccgagctcagggcat
cagtcagagccagatccgtattaccctcagtatccatcaaaccctgatccccgataccac
cctgactcacagtatcacccagacccgcggtacccagcacccaccaatccaaggtttcca
agttacggagaccggctaaaccaaccagatggtaggtattttgtccatacagcccaggaa
cgccctgcatacccagacacgcgttatacagtcacccctcagcgaagaccacctccacct
gtgccccagactccagtccaccatcacacttcaggtccagggctccacctgattgctatg
aacagccctcagaccggctccatgaagggcatccgtggtgcagacttcctgtgcttcagc
caggctcaagcagtcgggatgaagggaactttccgggccttcctttctgccagactccaa
gatctctacagcatcgtccacaagactgacagggaccatttgccaattgtcaaccttaag
gatgaggtgctatttgacagctgggatgccattttcagtggtggtagaatgaaggacagt
gtgacgatctactccttcgatggcaaggatgtgctaagtgacagcacatggccagagaag
atggtgtggcacggctccaacagcgccggtcagcatcacatcgacaacttctgtgagacg
tggcgtgtgggagacccggtggtgacaggcatggcatcatcgctgcagagcggcagtctg
ctccagcagagctccagcagctgctccagctcctacgttgtgctatgtatcgagaacagc
tatacgggccagtccaggagatag
DBGET
integrated database retrieval system
