Monopterus albus (swamp eel): 109960579
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Entry
109960579 CDS
T05607
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109960579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109960579
03041 Spliceosome [BR:
malb03041
]
109960579
03036 Chromosome and associated proteins [BR:
malb03036
]
109960579
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109960579
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109960579
mRNA cycle factors
Common to processing body (P body) and stress granule
109960579
Spliceosome [BR:
malb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109960579
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109960579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109960579
NCBI-ProteinID:
XP_020456435
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MSHVAVESAHGLEQQLAVLDLSAADGQGGGTNRRYIPPHLRNKDASKNAGNAFAAGRQGG
YTMAPPANYGWDCGRSNFVNGYHDNRMTGNSFNRGPPRMERGRGGVGGGGYRGNRGGAFN
PINPAQPMGFAGYETKDAGSWNTTKEVYSTFSNNRGKSAFFNDRGNANRGRFDHGGFGGG
GGGGNSRWVEESRDDGDWSKPTPRNERLENELFSGSNTGINFEKYDDIPVEATGQNCPHH
IESFQDVDMGEIIMGNIALSRYTRPTPVQKYAIPIIKSKRDLMACAQTGSGKTAAFXPIL
SQIYTDGPGEALNAAKASGQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSRV
RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDM
GFEPQIRRIVEQDTMPHKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENI
TQKVVWVEESDKRSFLLDLLSATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDR
SQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV
GNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSNRGRSKRFSGGF
GARDYRQTTAGGNTGGFGGRGGRNQAGHGGTRGFGGGGFGNFYTSDGYGGNYSHSQVDWW
GN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaagtgcccacggtctagaacagcagctcgctgtcctagac
ttgagtgcagcagacggacaaggtgggggcacaaacaggcgatacattcctccacattta
cggaacaaagatgcttccaaaaacgcaggaaatgcctttgctgctggccgacaaggtggc
tacaccatggcacctccagccaactatggctgggactgcgggcgcagcaattttgttaat
ggctaccatgacaaccggatgactggcaactccttcaaccggggaccgcctcgcatggag
cggggccgaggcggcgttggcgggggcggttaccgtggcaacaggggaggcgctttcaat
cccatcaacccagcacagccaatggggtttgctggttatgaaactaaagatgcaggcagc
tggaacaccaccaaggaggtatatagcacttttagcaacaacagagggaaatctgcattc
ttcaacgacagaggcaacgctaacagagggaggttcgaccatggtggatttggtggtggt
ggaggaggaggaaacagccgctgggtggaggagtccagagacgatggagactggtccaaa
ccgacaccacgaaatgaacgtcttgaaaatgagttgttctccggcagtaacactgggatt
aactttgagaaatacgatgacattcctgttgaggccacaggacagaactgccctcaccac
atcgagagtttccaagatgtagacatgggtgagattatcatgggtaacattgctctgagt
cgctacaccagaccaacccctgtccagaaatatgccatccctattatcaagtcaaagagg
gacctcatggcctgtgcgcagacgggttctgggaagactgcagcattcnncccaattctc
agccagatttacactgatggaccaggagaagctcttaatgcagctaaagcctctggacag
gagaatgggaagtatggacgtcgtaaacagtaccccatctctctggtactggctccaacg
agagaactggcgctgcaaatatatgatgaagccaggaagttttcctacaggtccagagtg
cgtccctgtgttgtgtatggaggagcagacattggccagcagataagagatctggagaga
ggctgccacctgttggtggccacaccaggaagactggtggacatgatggagaggggcaag
attggactggactactgcaagtacctggtcctggatgaggcagatcgtatgcttgacatg
ggctttgaaccacagataagacgcattgttgaacaggacaccatgccacacaagggcatt
cgacaaaccatgatgttcagtgctacctttcctaaagagatccagatcctggccagggat
ttcttggaggagtacatcttcctggcagtgggcagagtgggatctacctcagagaacatc
actcagaaagtggtgtgggtggaggagagcgataagaggtctttcctcctggacttgctc
agtgctacaggtaaggactcattgactctggtttttgtggagaccaagaaaggcgccgat
gccttggaggacttcctgtatcgggagggctatgcctgcacaagtatccatggcgaccgc
tcccagagagaccgagaggaggccctgaaccagttcagatcaggaaaatgccccattctg
gtggcaacagcggtagcagctcggggcctggacatctccaatgtaaaacatgttattaac
tttgacctgcccagtgacatagaggagtatgtccaccgtattggacgtacagggcgtgtg
ggaaacttgggactggccacatcatttttcaatgataagaatgggaacatcactaaagac
ctgctggacatcctggtagaggccaaacaggaagttccctcatggctcgagagcctggct
tacgagcatcagcacaagagcagcaacagaggacgctctaagaggttctctggtggtttt
ggagcacgtgattatcggcagacgaccgctggaggcaacactggagggtttggaggacgt
ggtggtcgcaaccaggcaggacacgggggaacccgtggatttggaggaggtggatttggc
aacttctacaccagtgatggctatggaggcaactactcgcactctcaagttgactggtgg
ggcaactag
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