KEGG   Monopterus albus (swamp eel): 109960681
Entry
109960681         CDS       T05607                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109960681 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:malb03019]
    109960681 (exosc2)
Messenger RNA biogenesis [BR:malb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109960681 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     109960681 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 109960681
NCBI-ProteinID: XP_020456607
UniProt: A0A3Q3RD21
LinkDB
Position
Unknown
AA seq 293 aa
MAADMRLPTIRKTVSLSVSAFDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLQHQVKDILKPEVMEEIVLLTQQKLLEQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggctgcggacatgcgattaccaactattcgaaaaacagtgtcgctgtcagtttctgct
ttcgaccgaaaagatctggtcgtccccggcgatgtaatcacgtcagatacaggttttatg
aggggccatggtacctatgttgatgaagacaagctgacggcttcagtcgctggagaggtg
cagagagtggacaagctgatctgcgtcagaccacttaagaccaggttcaatggtgaagtt
ggagatgtggtggttggcagaattacagaggtacaacagaagcgatggaaagtggagacc
aactcccggctggactctgtcctgttgttgtcttctgtcaacctacctggaggagagctg
aggagaagatcagcagaggatgagctcaccatgagagaataccttcaagagggcgatctc
attagtgcagaggtgcagtctgtcttctcagatggagctctatcgcttcacacccgcagt
ttaaagtatggaaaattgggtcaaggagtgttggtacagctttctccttctttgatcaag
aggcagaaaacacatttccacaacttgccgtgtggtgcatccatcatcctcgggaataac
ggctttgtgtggctgtatcctacaccgggacaacaggaggaggaggctgggggcttctac
accagtttggagcctgttagcctgtcagatcgagaggtgatttcacggttgagaaactgc
ctactagctttggctgcacacaaggtccttctgtatgacaccagtgttctctattgctat
gaatcttcactgcaacaccaggtaaaggacatcttgaagccagaagtgatggaggagatt
gtattgttgactcaacagaagctgctggaacaggaaggataa

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