Monopterus albus (swamp eel): 109960919
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Entry
109960919 CDS
T05607
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
malb03000
]
109960919 (sox5)
Transcription factors [BR:
malb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109960919 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Exonuc_VII_L
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
109960919
NCBI-ProteinID:
XP_020457038
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MLLSRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRVEDEESEGLG
GVIHLPLASYCGKVSPRSPPSRNLDSPPNTDQDGTKGNSLSPYPQHIATSPGKEEGGGMG
RACNDVGSVTGTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKDK
LLAMGSGHIGEIKGTPDSLAEKERQLMGMIGQLSSLRERLKEEQKKLAASQMEKQRQQME
LAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQQG
FLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGAKQ
HGGSLPPQTNLGTHSPPSNTHIQTDKCRSSPPPSKTKDSESAQPLNLSAKPKASESKSPN
SPPTSPQVPVAAAAAKLGPTGSMKHSATPSSIGGPPSRVSSIADLLSSLSSTAYLNDHEA
VTKAFAEAQQMKEQLKREQQVLDAKVAAVSNLGLNNGRSDKDKAALESLSQQLKQQSEDK
FGHAMLDFTMSGDSDGSPSVSDSRIFRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQA
FPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDG
KKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLSSAGMVYPGALSMTGMPSPQMPSEHSS
MSSSPEPNSNHHQNPHMPGLKRDEPHIKEEELRLDDSNGDVYDDFDYEDEEADYTSDNDN
HITQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgtcaagagagacggacccttactccagcatgctcactgagcctgagctacct
caggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagatgga
gaggtaaccatggcaaccagcagacagagagtggaggacgaggagagtgaggggctaggt
ggtgtcatccacctccccctggcttcctactgtggcaaggtgtcccctcgctcgcccccc
agccgcaacttggacagcccccccaacacagaccaggatggtactaaggggaactctctg
agtccttacccccagcacattgctacctcaccaggcaaagaggaaggtggaggcatgggg
cgggcttgcaatgatgttggctcagtcacaggcaccctggggacccccgagaggcgcaag
ggcagcctggcagatgtggtggacacactgaagcaacgtaagatggaggagctgatcaag
aacgagccagaagaggcccccagcattgagaggctgttgtcaaaggactggaaggataaa
cttttggccatgggctcagggcacatcggtgaaatcaaaggtactccagacagcctggcg
gagaaggaacgccagctcatgggcatgattggccagctaagtagcctgagggagcggcta
aaggaggagcagaagaagctggccgcctcgcagatggagaagcagaggcagcagatggag
ctagccaagcagcagcaggatcagattgcccggcaacagcagcagcttctgcagcagcaa
cacaaaatcaacctcctgcagcaacaaatccagcaggtccagggccaactccctccactg
atgattcccgtcttccccccagaccagaggactctggcagcggctgcagcccagcaaggc
ttcctcatgccccctggcttcaactacaagcctggctgcagtgacccctaccctcttcag
ctcatcccaacaacaatggctgctgctgcagctgctacaccaggcctgggacctctgcag
ctccagcagttgtacgcagctcagctggcagcaatgcaagtttccccaggggccaagcag
catggaggcagcctgccgccccaaaccaacctgggcacacactccccacctagcaacaca
cacatacagactgacaagtgccgcagctccccaccaccaagcaagaccaaggacagtgag
agtgcacagccactgaacctgtcggccaagcctaaggcatccgagagcaagtcacccaac
tcccccccaacttccccacaggtccctgttgctgctgctgctgccaagctgggccccacc
ggctctatgaagcacagcgccaccccctccagcattggaggaccaccatccagagtcagc
tcaatagcagacttgttgtcgtcgctgtcttcgacagcctacctgaatgaccacgaggca
gtgaccaaggccttcgccgaggcccagcagatgaaggagcagctgaaaagagagcagcag
gtccttgatgccaaggtggctgctgtcagcaaccttggtctcaacaatggacgctcggat
aaggacaaggctgccttggagagtctgagtcaacagctgaagcagcagtcggaggacaag
ttcggccatgccatgctggatttcaccatgagcggagactctgacggctcccccagtgtg
tcagactccagaatatttcgggagtcccggggtcgtggcagcaatgagcctcacatcaaa
cgcccaatgaatgccttcatggtttgggcaaaggatgagaggagaaagattctccaggcc
ttccccgacatgcacaactccaacatcagcaagatcctcggctcacgctggaaagcaatg
accaacctggagaagcagccctactatgaggagcaggctcgcctcagcaagcagcatctg
gaaaaatacccagactacaagtacaagccacggcccaaacgtacctgtctagtcgatggc
aagaagctgcgtatcggcgagtacaaggccatcatgaggtcccgcagacaggaaatgagg
caatatttcagtgtggggcagcagggccagctgcccttgtcctcagcaggcatggtgtac
ccaggtgccctgtccatgactggaatgccctcaccccagatgccctcagagcattcaagc
atgtcgagcagccccgagcccaactccaaccaccaccagaacccacatatgcctggcttg
aagagggatgagccacatatcaaggaggaggagctacggctggatgacagcaacggcgac
gtgtatgatgactttgactatgaggacgaagaggctgattacaccagcgataacgataac
catatcacacaatag
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integrated database retrieval system
