Monopterus albus (swamp eel): 109961327
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Entry
109961327 CDS
T05607
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109961327 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109961327 (dhx15)
03009 Ribosome biogenesis [BR:
malb03009
]
109961327 (dhx15)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109961327 (dhx15)
Spliceosome [BR:
malb03041
]
Complex A
U2 snRNP components
U2 related factors
109961327 (dhx15)
Complex B
109961327 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109961327 (dhx15)
Ribosome biogenesis [BR:
malb03009
]
Eukaryotic type
90S particles
Helicases
109961327 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Cas3-like_C_2
nSTAND3
Flavi_DEAD
AAA_29
AAA_25
nSTAND_NTPase5
T2SSE
Motif
Other DBs
NCBI-GeneID:
109961327
NCBI-ProteinID:
XP_020457690
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSKRHRLDLGDDYPSSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRERDRDRDIKPSIGT
AAAAGLPPLKQMVVQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDILTRNQSFV
LVGETGSGKTTQIPQWCVDMVRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEV
GYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLK
EVVRQRPDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIR
TVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQ
QRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL
VTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA
SCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQN
HESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALCTGF
FMQVAHLERTGHYLTAKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW
LVKIAPQYYEMGNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgtctagatttgggtgatgactacccctccagtaagaagaggtct
gacgggagagaccgggaccgtgacagagaccgtgaggaccgctccagggacagggaccga
gatagggatcgggacagggagagagaccgggaccgtgacataaagccctctattggcacg
gcagccgcggcaggcctaccaccactcaagcaaatggtggtgcagcagcagatcaatcca
ttcaccaacctaccacacacaccacgttactatgagatcctgaagaagaggttacagctt
cccgtgtgggagtacaaggaacgcttcaccgatatcctcacgcgtaatcagagctttgtc
cttgtcggagaaactggctctgggaagacaacacagatcccacagtggtgtgtggacatg
gtgagaagcttgcctggacctaagcgggcagtggcctgtactcagcctaggagagtggca
gccatgagcgtggctcaaagagtggcagatgaaatggatgtcatgctcggacaggaagtt
ggttactccatccgatttgaggactgtagctctgccaagactatactcaagtacatgaca
gacggtatgctgctaagagaggctatgaatgacccactgctggagcgatacggtgtgatc
attctcgacgaggcccatgaacgaactttggctacagacatcctgatgggagtactcaag
gaggtggtgcgtcaaagaccagatctgaaggtgattgtcatgagtgccacgctggatgca
ggaaagttccaggtgtactttgacaactgtcctctgctgactattcctgggcgcacacac
cctgtagagatcttctacacccctgagccagagcgagactatcttgaggcagcgatccgc
actgttatccagattcatatgtgtgaagaagatgaaggtgactgccttctcttcctcact
ggtcaagaggaaattgatgaggcctgcaaacgtatcaagcgtgaggtagatgaccttgga
cctgaagttggagatatcaaaatcattccactgtattccacgttgcccccacaacagcag
caaaggatctttgaacctcctcctccaaggaagcccaatggtgcaataggaagaaaggtt
gtggtgtcaacaaacattgctgagacttctctgacaattgatggtgtggtgtttgtcatt
gatcccggattcgccaaacaaaaggtgtacaatcctcgtatcagagtcgaatccttgctt
gtcacagctatcagtaaagcttctgcccagcaaagggcgggacgagctggcagaacgcgt
ccaggaaaatgtttccgcctctacacagagaaggcatacaaaacagagatgcaggataac
acataccccgagattcttcgatccaacttgggatctgttgtgctacagctgaaaaaactc
ggtatcgatgacctggtgcactttgacttcatggatccaccagctcctgaaacactgatg
agggcacttgaactgctgaattaccttgcagctctcaatgatgacggtgacctgacggag
cttggctccatgatggcagaattccccctggacccccagctggctaagatggtcattgcc
agctgcgagtttaactgctctaatgagatcctttccattactgccatgctgtcagtccca
cagtgttttgtccggcccacggaggctaagaaggcagcagacgagtccaagatgaggttt
gcccacattgacggagaccacttgacgctgctcaatgtctaccatgccttcaaacaaaac
cacgaatctaaccagtggtgttatgacaattttgtcaactaccgttctctgatgtctgcg
gacaacgtgcggcagcagttgtccaggatcatggaccgcttcaacctgccccgccggagc
acagagttcactagcagagattactacatcaacatccgccgggcgctctgcactggcttc
ttcatgcaggtggctcatttggaacgcacaggtcattatctcacagctaaagacaaccaa
gtggtccagctgcacccatctacagttttggaccacaagccagagtgggtgctctacaac
gaatttgttctcaccaccaagaactacatccgcacttgtacagatatcaagccagagtgg
ctggtgaagatcgcgccccagtactatgaaatgggcaacttcccacaatgtgaagctaaa
agacagctggagcgaatcattgccaaactagagagcaaggagtattcccagtactga
DBGET
integrated database retrieval system
