Monopterus albus (swamp eel): 109961525
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Entry
109961525 CDS
T05607
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
malb04131
]
109961525 (vps13a)
Membrane trafficking [BR:
malb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109961525 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
109961525
NCBI-ProteinID:
XP_020458048
LinkDB
All DBs
Position
Unknown
AA seq
2924 aa
AA seq
DB search
MWSWQHIERHRKMVKGYRELYKTKITSKKPSEELLKQLEELEKTLDIFNITLARQQAEVE
ASKAGLRIYRPGLKMEEEESQGWLGWMWSWGGGATQTKEAKPGGFDELLTPAEKAKLYTA
IGYSETAVNPNLPKDFEDMKVNFQMERLSVSIKDKKDKNEIIRLTVGELKSTLTQRPGAQ
AIKLTARLSLFEVTGLASNRPAPTLLSSRKAATGTGTPLLCVLFETNPLDESANQRLHVE
SQPLEIIYDAITVNSMSAFFMPPDDLPLDELTNATLMKLEQFRDRTATGLMYVIETQKVL
DLKVNLMASYVIIPQTGFYNGTQNILLLDLGHFKMSSQSRKHLPHLSASSSNIEDIMSRA
YDSFDIQLSSLQFLYSKPDGDWKKARKQKQSPLHILQPVDLKVEFSRAMVVKDSRMAKYK
MSGELPLLSLRISDDKLRSVVELVESIPLPESKPAARSSTAPKSKQLFTPQLTPRRPLNL
TDQRSSLIFESCETISVMSLGSEEDLFYDAPTSPIGDQPFFPDNPMPLRYGDLHKIKSLV
KEDPQKNMTDFIMKFEISEFSVQLCRLSGGKEVTVLHLDIEGLGTELKLRTFDMTSNTFL
REICLKCPEYMDSEDQQVQLITTLDNTEVDLLTLEYIKADKNGPEFKSQHNNTEQLIKVT
FSSLDIHLHTEALLNAMNFVNSLLPPSTKKEGGQEELPTIPEEDETEAEREGEKKEEAIV
TTKKRSKRSKFADVVNLHIRADLRCLKIFIRGEKARISEISIEGLVSEVLMRKKEMEVLA
NLKNIVILDCDKDALYKKAVSIADKEVFAFRMVNYTDATQGDAYLDMSEVDTYVKLTVGC
IQVIFLNKFVSSILAFINNFQEAKEALAEVTVQAAGKAAFGVKELAERSTRIALDVHFNA
PVIFLPQSSSSSNVIVADLGLLSVKNRFAKQPFKSDAKIPPVVDIMTVKLTDLKMYRTTY
VNEGFHGEIQLLKPVSLDLEIQRNLSSNWYHNIPDIEIAAHLKPMSLILSQDDMTVVLRT
LSENLSEKADAAPLPKPLPTIDSSSDSVSNKESQGSGTTGPPSSNTVVTAAVVEMQKNSK
LKSTLKLNFLFDSLTLVLYSPNGDEMQLLDSHDEQLKLAEFTLGTISTSFHMFSDSSMKA
SVRLTACLLDDKRPRIKMVTPRMMAMRPGAEKNMMVELNYRQGRDGTSLDTVVQDVYLCA
SMEFLLTVADIFLKATQQGFAQVPQPKSSSGDKKNINSSITSKESTAAPAMVSKTEMNVV
VRNPEIVFVADLTCADAPALVMTTQCELVMKSSGEGSQMTAVIKDLKVVACPFLREKRKN
NVTTVLHPCQVFFQSTQSSNSPQTMEVSINALTLKVSPIIINTVITIQSALTPTAEAPEE
LESPVPVDLWEKRGWKDLKLWFLEEEGDEDVRSLAPLIPQGESLKVTIGSICLTLEAGVG
HRTVPMLLAKSSFHGDVINWSTLINLHSELNLEVHYYNEVMGVWEPLLEPLEEETRDGFR
PWRLDLKMKKKPVKYSTMSDEVDYNVPDYKTVIVISSEDQLNITLSKCGLAMLSNLGTAF
AEAARQTAEGFQTDEAPFVVKNCLGLPVSVRHSETFCPVGEQSTNHAVKLEDGETLGMDY
STTDSDQFSAMISLSEKDYYIQPTPVGHTSACRIPLIKVGRGMYSVMHEDSGVTRFLVCQ
IYSVEGSKYIKIRSPFQIINHFSVPIKVFEGSTCLGTALPTEEFCVPLDSYRSELSLQPV
TEGDTDNEGEQFECSEGFSYEDISKQQPETRLQQTCRRSGNQGGVMMINIVPIKDAVTFK
HTGDVGENFDVPFVLHLWPSVLLRNLLPYTITYKLKDSGTSAPEATLDPGHSAQLQTAVI
DQSSLSLCLLNYLAQDWSSEYSVHSNQEEITFIVFHSLQEDDEDNHEGTERKRAELDIAV
HVKYDLGQTVIAFHSPYWMVNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRHFLRNNK
VRLMISDSELSDDFSMDTVGSYGDVKCKGRYKDYLVGVKIDASSFSLTRVVTFVPFYMLV
NRTKHSVLVCGEGQENWTETKPEQSAIPFWPENDAKKLKIKVGGSRSPPKTIDFTRPENC
LLLHLDNSVGGIIVDVNLSEHSGTIRFSEYHDGAAPFLIINTTKDHTLQFHQSTWAETTC
VADELRSLPFSVGEDSSQKETEQEELGAGRAVYYTWAEPTGSRELCWKCGTYSGKLRSEE
DLRKDMNNEGKLFVISFYEGLQRVVLFTEEQRIYKLLCESEKAQLAEQEINLSLRNVGVS
LVNNSSSQEVSFIGITSSDVVWELKPKKKNRWKTLSTKEAEMLENKFKEYIDPGPIDNCI
ADLENNYQVSFTPSGTDMWMLQPCEAPLRRHFLPGVKVEYSVSPRQRAYRVQIHRIQIQN
QLPGAIFPYVFYPAKLPKSITMDSEPKPLTDISIVTRAAGHSDISRIKYFKVLIQEMDLK
LDLGFLYAILDLFTPENASIMSSEQEVELFEKDIEYIKAELNHVSSADTSAISLYEYFHI
SPIKLHLSFSLSTGGEDGLKQKRDTELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELT
FQFCTTQQLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGA
IQGPEEFVEGMALGVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNK
QPSGLREGLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTG
GIIDMASSTFQGIKRAADSSEDVESLRPPRFIHEDGVIRPYKEREGIGSQMLQKIENGRF
AKYRYFAHAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEDRRLRI
EAKERVKSVFHAKEFGKIINFKTPEIAKWVLAKLEDARESLPKY
NT seq
8775 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcatggcaacatattgaacggcacagaaagatggtgaagggctacagggagctc
tacaagacaaagatcaccagcaagaagcccagtgaggagctgctcaaacagttagaggag
ctggagaaaaccttggatatttttaacatcaccctggctagacagcaggctgaagtggag
gcaagcaaggcaggcctgcgtatttaccgtccagggttaaagatggaggaagaggagtct
cagggttggctcggctggatgtggagctggggaggaggggctacacaaacaaaggaggcc
aagcctggaggttttgatgagctgttaacccctgctgagaaagccaaactctacactgcc
attggttacagtgagactgctgtaaatcccaacctgccaaaggattttgaggacatgaag
gtcaacttccaaatggagaggctgtctgtatccatcaaagacaaaaaggacaaaaatgag
atcatcaggctgactgtgggagagctcaagtccaccctcacacagagacctggagcacaa
gccatcaaactcacagcccggcttagtttgttcgaggtcactggcctggccagtaatagg
ccagcaccaacccttctttcatcaagaaaggcagccacagggacagggaccccactgctt
tgtgttctctttgagaccaatccattggacgagagtgctaaccagcggcttcatgtggaa
tcacaacccctggaaatcatctatgatgctataactgtgaacagcatgtcagcgttcttc
atgcctcctgacgacctgccactggatgagctcaccaatgccaccctgatgaaactggag
cagtttagagaccgcacagccactggtctaatgtatgtgatcgaaacgcagaaagttctc
gacctgaaggtgaacctgatggcctcctatgtcatcattccacagaccggcttttacaat
ggcactcagaacatcctactgttggatcttgggcatttcaagatgtccagtcaaagcagg
aagcatctgcctcacctgtcagcgtcctccagcaacatcgaagacatcatgtccagagca
tacgacagctttgacattcaacttagtagtctgcagttcctttatagcaaaccagatggc
gactggaaaaaggcccggaagcagaaacagtcaccactccacattctacagccagtggat
ctgaaagtggaattcagcagggcgatggtcgtgaaagactcccgcatggcaaagtataag
atgtctggagagctccctctgctgtctcttcgtatttctgatgataagcttcggagtgtt
gttgagctggtagaaagtatcccacttcctgagagcaaacctgctgcccgcagcagtact
gctccaaagtcaaagcagttgttcaccccccagctcacccccagacgacctctgaactta
actgaccagcgctcatctctcattttcgagtcatgtgagaccatcagcgtgatgtctttg
gggtcagaggaagatttgttttacgatgcgcccacctctcccattggtgatcaaccattc
ttcccagacaatcccatgccgcttcgctatggggacttgcacaaaataaaaagtctggtc
aaagaagaccctcagaagaacatgactgacttcatcatgaaatttgaaatcagtgagttt
tctgttcagttgtgtcgcctgtctgggggtaaggaggtcacagtgctccacttggatata
gagggtctgggcactgaactcaaactgcgcacctttgacatgacatcaaacacattcctt
cgagagatctgcctcaagtgtcctgagtacatggattctgaagaccagcaggttcagttg
atcactactctagacaacacagaggttgacctgctcacgctggagtatatcaaagctgat
aagaatggccccgagttcaagtcccaacacaacaatacagagcagctcatcaaggtgacc
ttctcatccctagatattcatcttcacacggaggctctcctcaatgccatgaacttcgtc
aacagcctccttcccccatctactaagaaggagggaggacaggaggagctccccacaatc
cccgaggaggacgagacagaagcagagagggaaggagagaagaaggaggaagctattgta
accacaaagaaacgttcaaaacgttcaaagttcgcagatgtggtgaatctccacatcaga
gctgatctccgctgcctgaagatttttattcgaggagagaaagccaggatctctgagatt
agtattgaaggtctggtttctgaggttctgatgaggaagaaggagatggaggttctggcc
aacctgaagaacattgtgatcctagactgtgacaaagatgccttgtacaagaaggctgtg
tctatagcagataaggaagtgtttgccttccgcatggtaaactatactgatgcaacacaa
ggagacgcctatctggacatgtctgaagtagatacctatgtcaagctgactgtgggatgc
atacaagtcatcttcctcaacaagtttgtctcttctatactggcattcatcaataacttc
caggaggccaaagaggccctggctgaggtgacagtccaggctgcaggaaaggcagcgttc
ggtgtgaaggagctggcagagcgaagcactcggatcgctttggacgtccactttaacgcg
cctgtcatcttcctcccccagtcttcctcttcttcaaatgtcatcgtagctgacctcggt
ttgctgtctgtcaagaaccgttttgccaagcaaccgtttaaaagtgatgccaagatccca
cctgttgtggatataatgactgtgaaactgactgacctcaaaatgtacaggaccacttac
gtgaatgaagggtttcatggagagatccagctcctgaagccggtcagcctggacttggaa
atccagagaaatctttcatccaactggtaccacaacatacctgacatagagatcgctgct
catctaaagccaatgagtctgatcctcagccaggatgacatgacagtggtcctaaggact
ctaagtgaaaacctgtcagagaaggcagatgctgctccacttcctaaacctctgcctacc
attgactcctcctctgactctgtatccaacaaagagtcccagggctctggaaccactgga
ccacccagcagtaacacagtggtgacagctgctgttgtggagatgcagaaaaacagcaag
ctaaagagcacactcaagttgaacttcttgtttgactccctgacgctggttctgtacagc
cctaatggggatgagatgcagctgttagactcacatgatgagcagctgaagctggcagag
tttactctgggcaccatctccacctccttccacatgttttctgacagctccatgaaggcc
tcagttcgactcactgcctgccttctagatgacaagagacccagaataaagatggtcacc
ccaaggatgatggcgatgcgtcctggtgcagaaaagaacatgatggtggagttgaactat
cgtcagggccgtgatggcacctccttggacacagtggtgcaggatgtgtacctgtgtgcc
agcatggagtttctacttacggtggctgatattttcctcaaagccacccagcagggtttt
gctcaagtgccacaacctaagagcagtagtggagataaaaagaacattaactcctccatc
acatctaaagagtccactgcagctccagctatggtgtcaaagacagaaatgaatgttgtg
gtgcgtaacccggagattgtgtttgtggcggacttgacatgtgctgacgctccagctctg
gtgatgaccacgcagtgtgaactagtgatgaaaagtagtggagagggatcacagatgact
gctgttatcaaggaccttaaggtagtggcgtgtccctttttgagagagaagaggaaaaac
aatgtgaccacagtgctacatccgtgtcaggtgttcttccagagtactcagtcctctaac
tcccctcagactatggaggtctctatcaatgctctcacactgaaggtgtctccaatcatc
atcaacacagtgatcaccattcagtcagcactcactcctacagcggaggctcccgaggag
ctggagagtcctgttcccgtggacctatgggagaaacggggctggaaggatctcaaactc
tggttcctagaggaggagggggacgaagacgtaaggtcactggccccattgataccacaa
ggagagtcattgaaggtgaccattggatcaatctgtctgactctggaggctggtgtggga
catcgcactgtccctatgcttcttgccaagtcctccttccatggagatgtcataaactgg
tccactctcattaacttacacagcgagctcaacctggaggtgcactattacaatgaagtg
atgggagtgtgggagccactgctcgagcccttagaggaggagacaagagacggtttcaga
ccatggagactggacctgaagatgaagaagaagccagtgaagtactccactatgtcagat
gaagtggattataatgttccagactataagacagtcattgtcatcagcagtgaagaccag
ctcaacatcaccctctccaaatgtggactggccatgttgagtaacctgggcacggcattt
gcagaagctgccagacagacagctgagggcttccagacagatgaagcgccatttgtggta
aaaaactgcttgggcctgcctgtttctgtccgccacagtgagacgttttgtcccgttgga
gagcagagcaccaaccacgctgtgaagcttgaggatggggaaacccttgggatggactac
tccaccacggattctgaccagttctcagccatgatctcattgagtgagaaggactactac
atacagcctactcctgtgggtcacacctcagcctgcaggatcccactgatcaaagtcggc
aggggaatgtacagtgtgatgcacgaagactcaggagtcactcgtttcctggtttgtcag
atttactctgtagagggcagcaagtacatcaagatccgctctcctttccagataatcaat
catttctcagtgccaatcaaagtttttgaaggttcgacatgtctgggtacagctctccct
actgaagagttctgtgtgcctctggactcatataggtctgagctgagccttcagccagta
actgagggagacactgacaacgaaggtgaacagtttgagtgctcagagggtttcagttat
gaagacatcagcaagcagcagcccgagacgcgcctccagcagacctgccgtcgcagcgga
aaccagggtggtgtcatgatgatcaacattgtgccaataaaggatgcagtgacattcaaa
cacactggagatgttggggaaaactttgatgtgccctttgtgcttcacctgtggccttct
gtcctattacgcaacctgctgccttacactatcacctataaactaaaggacagtggaacc
tctgctcctgaggccactctggacccaggccactccgcccaacttcaaaccgcagtcatc
gaccagtcaagtctcagtctctgccttctgaactacttggctcaggactggtcttctgaa
tacagtgttcatagtaaccaggaagagatcaccttcatcgtgttccattctctacaagag
gatgatgaagacaaccatgaagggacagagaggaagagggcggagttggacattgctgtg
catgttaaatatgacctgggacagacagtgattgctttccactcaccgtattggatggtg
aataagacaggcaggctgctgcagtacaaggctgatgatatccatcgtaaacaccccctg
gactatgacatgcccctgctgttctccttcaagcctcggcacttcctgagaaacaataag
gtccgccttatgatctcagacagtgaactctcagatgatttctccatggatacagttggg
agctatggagatgtgaaatgtaaaggcagatacaaagattacctggttggtgtgaagatc
gatgcaagcagtttcagtctgacccgcgtcgtgacctttgtgcctttttacatgctggtc
aacagaaccaaacacagcgtcctcgtatgcggggagggccaggagaattggactgagacc
aaaccagagcagtcagctattcctttctggcctgagaacgatgcaaagaagctaaagatc
aaagtgggaggttctcggtctcctcctaagactattgacttcacacggccagaaaactgc
ctattgctgcatctggacaactctgtgggtgggatcatagtagatgtgaacctatcagag
cactcgggcacaatccggttctctgagtaccacgatggtgcagcgcccttccttatcatc
aacaccaccaaagaccatactcttcagttccatcagagcacctgggcagaaaccacgtgt
gtggctgatgagctgcgcagcctccccttctcagtgggggaggacagctctcagaaggag
acagagcaggaggagctgggggctgggagagctgtttactacacctgggctgaacccacc
ggctcccgagagctttgctggaagtgtggcacttacagtgggaagctgaggagtgaggag
gacttgcgcaaggacatgaataatgagggaaaactgtttgtgatctccttttatgaaggt
ctccaacgcgttgtcctgttcactgaggagcaacgcatctacaagctgctgtgtgaaagc
gagaaggcgcagctggctgaacaggaaatcaacctgtctctaaggaatgtgggtgtgtct
ctggtcaacaacagcagcagccaggaggtgtcttttatcgggatcacaagctctgatgtg
gtgtgggaattgaagcctaagaagaagaatcggtggaagactctgagcactaaagaagca
gagatgttggagaacaaattcaaagagtacattgaccctgggcctatagacaattgcatc
gctgacctggaaaacaattaccaggtgtcctttactcccagtggtactgatatgtggatg
ctgcagccatgtgaagctcctctcaggaggcactttctgcctggagtgaaggttgaatac
agtgtctcaccgcggcagagagcctaccgtgtccaaatccaccgcatacagatccagaac
cagctgccaggtgccatcttcccctatgtgttttaccctgcaaaactgccaaagtctatt
actatggactcagaacccaaacctctaaccgatatcagcattgttaccagagcagcaggg
cactctgatatctctcgcatcaagtatttcaaggtcctgattcaagagatggatctgaag
cttgacctgggcttcttgtacgccatcttggacctgtttacccctgagaatgccagcatc
atgagctcagaacaggaggtggagctgtttgagaaggacatagagtacataaaggcagaa
ctaaaccatgtctcctctgctgacacttctgccatcagcctctatgagtacttccacatt
tcccccatcaagctgcacctgagcttctctctaagcacaggaggagaagatggcttgaag
cagaagagagatacagaactcattcctgtccagtccctcaacctgctgctgaagagtatc
ggagcaactctcactgatgtgcaggatgttgtcttcaagctggccttctttgaattgacc
ttccagttttgtaccactcagcagctacaatgggaagtcattagacattattcgaagcag
gctattaaacagatgtatgtgctggtgctgggcctggatgtgcttggaaaccccttcggg
ctgatcagaggactgtcagagggtgtggaggccttcttttatgagccctatcagggagcc
atccagggcccagaggagtttgttgaaggaatggctcttggggttaaggctctggttggg
ggtgctgtagggggtatagcaggcgcggcctccaggataacaggtgccatggcaaagggt
gtcgctgcgataactatggatgaggaatatcagcagaagagacgggaggctatgaacaaa
caacccagtggcctgagagaggggcttaccaggggtggaaagggactggtgtctggtttt
gtcagtgggatcacagggattgttacaaaacctattaaaggagcccagaaggagggtgca
gcaggcttctttaaaggtgttgggaaaggtctggttggtgcagtggccagacctacagga
gggattattgacatggccagcagcaccttccaggggatcaagagggcagcagattcttca
gaagatgttgaatctctgcgtcctcctcgcttcatccatgaggatggtgtgatacgacct
tataaggagagggagggcattggcagtcagatgctgcagaaaattgaaaatggacgtttt
gccaagtacagatacttcgctcatgctaaggtcaatgactcagacttccttatgatcacc
aagaggggcatattttttgtgaccaaaggcacgtttggccagttgacctgtgagtggcag
tacctgtttgaagagttcactaaggatccgatgattgtagaggaccgacgacttcgcatt
gaggccaaggagagagtaaagtcagtcttccatgccaaagagtttgggaagatcataaac
ttcaaaactcctgagattgccaagtgggttcttgccaaactggaggacgcaagagagagt
ttacccaaatactga
DBGET
integrated database retrieval system
