Monopterus albus (swamp eel): 109962519
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Entry
109962519 CDS
T05607
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109962519 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109962519 (edc4)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109962519 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
109962519 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
RMC1_N
SYCP2_ARLD
Motif
Other DBs
NCBI-GeneID:
109962519
NCBI-ProteinID:
XP_020459956
UniProt:
A0A3Q3IYX8
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MASGSNIDIEGATQHLRDILKLDRPGNSTDAQYSDSQRKLPFNGELNGLLGTAGLLGSTD
QATMSESTRPISTDISSTQESQIICLSGDDGSTCIPITSNNVEIVASQDSSINSKARGSN
KVKIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIRGTNNHAMIRVLSLSSAERSLLKGFTG
AITDLAFAHLDSNLLGCVDEAGNLMVWQLTCTANKILDQIVVHIRRPDNTPLNSHRRLIW
CPFILDDSDENQDDTSQTLALLHEDRAEVWDLEVLRANNSNWPVKATELKEGLITVKGHN
QQVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDQPRCLHELRPHGGRPLSCLLFCDN
HKRQDPDVPFWRFLITGADQNQELKLWCTISWTCLQTIRFSPDPFNSSALPSLKASLDLS
AEYLILTDVQRKVLYVMELLQDLEKGKASFTAVSEFLLTHPVLSFGVQDVAHSRLQHTEV
LPTEEESESLTTEGNQGAAESKSGIQIKLFCVHTKSLQDVQIWFQPTVGSNSADLLPCSD
SQDCFAGFSDHLTDHSSDKESGSGSQTDLRKIPSLPPPADFLSNSATGSGPMLKLMTPDA
FMTPSTSVPASPGSSASSLTIVTAISSNTDSTNRAVDDGSQSPNRAENSSSSLVFSTSTS
SPRAASVVLLSGLENLQTLVSPSSPLALDSPQVLDSPLLLPLASPTRARSPDVISSASTA
MSQDMPEIASQTLQLQLGLGSSLEPIPLSALQTDSMASAASALHLLTSPRTANNNSLLPL
ELGGADGPVAGTVESEPRLSHTPSLLENALSQENPGVGGGSSDGNVSHTPWPAAPDITRE
TRNSLRDNGLGDCSREESQDRHLNSPYHQRSYHLTQNDSQDTGPEQSDPDDEVASLASSS
GNCGSCSSHRLPVKDWKTSPKLKRKTRKDDSESSLFRQMDSGQMNAEVQDELLIVLRSQQ
RDLTELRGQIEAMQTSIMAQVEHVLTNHQEQEQLRLERVLAESQNQQQQQQLQEQLSQQL
SHTLSTALTNRMDKVLREELKKTVPQTISKSLEPITGQLSSTVAAKLTAVEVTLKDNVTK
VVKSKNITDAIGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGTQE
YIQQLETHMKNKKQREHETQDPVIGQLQQMIDSFQSSTDQLATNITAAIRSEVQHQIQMM
VGNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAASTPVPTARLDYQTQQAN
ILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLSS
NLSTHSELKISYLEDAVMNLDHGDPLTRDHMSSMLAQFRQKLLGFLQQDPHSPVSKRARR
LMMMLQGLVNHKSII
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggctccaatatagatattgagggtgcgacccagcatctccgggacatcctt
aagttagaccgtcccgggaacagcaccgatgcgcaatatagtgacagccagagaaagcta
ccttttaatggtgagctgaacggcttattaggaactgctggccttctagggagcactgat
caggccaccatgtcagaatctaccagacccatctccacagacatcagcagcactcaggag
agtcagataatctgcctttctggtgatgatgggtccacttgtatccccatcacctctaac
aatgttgagatcgtggcaagtcaagactccagcatcaacagcaaggctcgaggcagtaac
aaggtgaagattcaacctgttgccaagtatgactgggaacacaagtattattatggcaga
ctgatagctgtgtccaactccttcctggcctatgccatcagaggaaccaacaaccatgct
atgattcgtgtcctgagtctaagttctgctgaacgctcattgctaaagggattcactggg
gccatcacagatctggcgtttgctcacctcgactccaacctgttgggttgtgtagatgaa
gctggcaatctgatggtctggcagcttacctgcactgcaaacaagatactagatcagata
gtggttcatatcagacgaccagacaacactccactgaactcccatcgtcgtctcatctgg
tgcccattcatcttggatgacagtgacgagaaccaggatgacaccagccagactttggcc
cttttacatgaagacagggctgaggtgtgggacctggaggtcctgagagccaacaacagc
aattggcctgtcaaagccacagaactgaaagaaggcctcatcacagtcaagggacataac
cagcaggtcagtgaaggggccctgtctccagatggaactgtgttggcaacagccagccat
gatggatacatcaagttttggcagatttacatagaagggggacaggaccaacccagatgc
cttcatgaattgcggcctcatggaggacgtcctctctcctgccttcttttctgtgacaac
cacaagaggcaggacccagatgttcctttctggcggttcctaataactggagcggatcag
aaccaggagttgaagttgtggtgcaccatttcctggacctgtttacagaccatcaggttt
tctccagatccattcaactcctcagctctgccaagcttgaaggccagtctggacctctct
gctgagtatctcatcctcactgatgtacagaggaaggttctgtatgtgatggagctattg
caggacttggagaaaggcaaggcaagtttcacagctgtctcggagttcctgctcacccac
cctgtgctcagctttggggtccaggatgtcgcccatagccgactgcaacacactgaagtc
ctccctacagaggaggagagtgagagcctgaccacagagggtaatcaaggagctgcagaa
tcaaagtctgggatccagattaaactgttctgtgttcacaccaagagtctgcaggatgtt
cagatctggttccagcccactgtgggttccaactctgcggacctcctaccctgttctgat
tctcaagattgttttgcagggttttcagaccatctcactgaccacagctctgacaaggag
tcaggaagtggctcccagactgacctaaggaagatcccatctcttcctccacctgctgac
ttcctttcaaactctgccactggcagcgggccgatgctcaagctgatgactcctgacgcc
ttcatgacaccaagcacttcagtcccggcttctcctggcagcagcgccagcagtctgact
attgtaacagctattagcagtaacacggactcaactaacagagctgtagacgatggcagt
cagagtcctaacagagcagagaacagcagcagcagtctggtattttctacttccaccagc
agcccaagagctgcttctgttgtgctgctgtctggactagagaacctgcagactttggtg
tcccctagcagcccccttgcacttgacagccctcaggtcctggactctcccctcctgctg
ccactggcctctccaaccagagcccgctcccctgatgtcatctcctcagcctctacagcc
atgtcccaggacatgccagagattgcatcccagaccctgcagcttcagctaggacttggg
tccagtttggagcccatacccctatctgctctgcagacagacagcatggcctctgctgcc
tctgctctacacctccttacctccccacgcacagccaacaacaacagcttgttgcctctt
gagcttggaggtgcagatgggccagtggctggaacagtagagtcggagcctagactcagc
cacaccccatctctgctcgagaatgccttatcgcaagagaaccccggggtgggaggaggg
tcctcagatggtaatgttagtcacacaccctggccagctgcacctgacatcaccagagaa
accaggaacagtctcagggataacggtcttggagactgttcaagagaggagtcacaggac
agacacttgaactcaccttaccatcaacgctcctatcacctcacacagaatgacagtcag
gacacgggtccagagcagagtgaccctgacgatgaggtggccagtctggcatcttcctca
gggaactgtggctcttgctcttctcacagactcccagttaaggattggaagacctcacca
aaactaaagaggaagaccaggaaagatgacagtgaatcatctctgttcaggcaaatggac
tctggtcagatgaatgcagaagtgcaggatgagttgttgatagtactgcgtagtcagcag
agggacttaactgaactgcgtggtcagattgaagccatgcagacctccattatggcccag
gtagagcacgtcctgacaaatcaccaggagcaggaacagctcagattggagcgagttctg
gcagagagccagaatcagcagcagcagcagcagcttcaagaacagctcagccagcaactc
agccacaccctcagcacagccctcaccaacagaatggacaaagtgctacgagaggaactg
aagaaaacagtcccacaaacaatctctaagagcctggagcctatcacaggtcagctgagc
agcacagttgctgctaagctaactgcggtggaggtcaccctgaaggacaatgttaccaag
gtggtcaaatcaaaaaacataacagatgctattggtcgagcagcagctgaggcaatgcag
gggcccatccaggcagcttataaagatgccttccagagtattgtgttgcctgtgtttgag
agaggctgccagtcaatgtttcagcaaatcaatgacagcttcaaacaaggaacacaagaa
tacatccagcagcttgagactcatatgaagaacaaaaagcagagagagcacgagacacaa
gaccccgtgattggccagctccagcagatgattgacagtttccaaagctccaccgatcag
ctggccactaacatcacagctgccatccggtcagaggtccagcaccagatccagatgatg
gtgggaaatttgcaggagtctattcttagccatgtgcagcggattgtcaaaggggaggtg
agcctggcaatgaaggagcagcaggcagtggtcacctccagcattatgcaggcgatgagg
tcagcggccagcacacccgtccccacagcacgtctagattaccagacacagcaggccaac
atcctgcagcttctccagcagggccagctcaaccaggctttccagcaggctctgtcagca
acagatctgaacctggtcttgtatgtatgcgagaccatcgactctcagcaggtgtttggt
cagcacccctgccctctcagccaacccgtgctgctgtctctcatccagcagctctcctca
aacctctcaactcactcagaacttaaaatcagctacctggaggatgcagtgatgaatctg
gatcatggtgaccccctgacaagagaccacatgtcatctatgttggcgcagttcagacag
aagctccttggcttcctgcagcaggacccccacagtccagtcagcaagagggcgcggcgt
ctgatgatgatgctgcagggtcttgtcaaccataagtccatcatttaa
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integrated database retrieval system
