Monopterus albus (swamp eel): 109962770
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Entry
109962770 CDS
T05607
Symbol
dhx8
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109962770 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109962770 (dhx8)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109962770 (dhx8)
Spliceosome [BR:
malb03041
]
Complex C
Other components
Step II factors
109962770 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
GIPC1_GH2
nSTAND3
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109962770
NCBI-ProteinID:
XP_020460423
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MMADGGVDELSQLEYLSLVSKVCTELDNHLGISDKDLAEFVISLAEKQPTFDGFRALLLQ
NGAEFTDSLISNLLRLIQTMRPPSKTSTSKTSETLVKPKTEKERLKEMFPALCRPNDPPP
KKLLDEDDVKVAADAMKELEMFMPSVSGTDSKASKSRSEKSRHHSRSRSRSRERDRHRDR
DREKDRKRRHRSQSRSRSRSRSRDRDRHRDRDRGKRRDKSSRWTERSPSPRKDQDRDSDR
WKDKHVDRPPPEEPSVGDIYNGKITSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVAN
VADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGPDGGEEVSMRNPD
RPSNLNLGHAPELEQDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILP
KVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERR
ELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFGGNK
VSYGKKTQLSILEQRESLPIYRLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY
TTRGKIGCTQPRRXEEYGCCLGQEVGYTIRFEDCTSPDTVIKYMTDGMLLRECLIDSELG
QYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTI
PGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERM
KSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDP
GFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNV
PEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLG
RRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQ
PEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRRKLDVVSCG
KATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLT
TKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAF
RRR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagacggtggagttgacgagttatcgcaacttgaatatttgtctttggtgtcc
aaggtttgcacggaacttgacaaccatcttggaataagtgacaaagatttagctgaattt
gttatcagtcttgctgaaaaacaaccgacttttgatggattcagagctcttttgctccaa
aatggagccgaattcactgactctctcattagtaacttgctcaggctcattcagactatg
cgacctccatccaagacatctacaagtaaaacctctgagactttggtcaagccgaagaca
gaaaaggagaggttgaaggagatgtttcctgcactgtgtagaccaaatgatcctccacca
aagaagctactagatgaagatgatgtgaaagtagcagctgatgctatgaaagagttggag
atgtttatgcccagtgtcagtgggacagactccaaagccagcaagagcaggtcagaaaag
agcaggcaccacagccgaagtcgcagcagaagcagagaaagggaccgacacagggacaga
gatcgagagaaggacaggaagaggcggcatcgctcccagtcacgttccagatccaggtct
cgttccagagaccgggatcgtcacagagacagagatcgtgggaaaagaagagacaaatct
tcccgctggacagagcgctcacctagccctagaaaagatcaagacagagactctgaccgc
tggaaggataaacacgtggaccgccctccaccagaggagccttctgttggcgatatctac
aatggcaaaatcaccagcatcatgcagtttggatgctttgttcagctggagggactgagg
aagcggtgggagggtttggtccacatttctgagctgcgtcgagaaggccgtgtggccaat
gtggctgatgttgtcagcaaaggccaaagggtcaaagtcaaggtgctgtcattcactggc
tccaaaaccagcctcagtatgaaggatgtggaccaggatacaggtgaagacttgaacccc
aacaggaggaggaacgtaggcccagatggaggtgaggaggtctccatgaggaaccccgac
cggccaagtaacctgaacctgggccatgcccctgagctggagcaggatgacacgctggag
cgcaagcggctcactaagatttctgacccagaaaaatgggagatcaagcagatgatcgct
gccaacgtcttgtcaaaagaagagttccctgactttgatgatgagacaggcatccttcct
aaagttgatgatgaagaggatgaagacctggaaattgagctggtagaagaggaacccccg
ttcctgaggggacacaccaaacagagcatggacatgagccctgtaaagattgtcaagaat
ccagacggctcgctgtctcaggcagccatgatgcagagcgctttggctaaggaacgacga
gagctgaagcaggcagcacgagaggcagagatggactccatccccatggggttgaataaa
cactgggtggacccgctgccagatgctgacggcaggcagattgcagccaacatgagaggc
attggcatgatgcccaatgacatcccagagtggaagaagcacgcgtttgggggtaacaaa
gtatcttatggaaagaagacccagctctccattcttgagcagagggagagcctgcccatc
tacaggctgaaggagcagctcgttcaggctgttcatgacaaccagattttgattgtgatt
ggagagacggggtctggtaagaccacgcagatcactcagtacctggcagaggcaggttac
accaccagggggaagattggctgcacgcagccccgtcgtnctgaggagtacggctgctgt
ctaggacaagaggtgggttacaccatccgttttgaggactgcaccagccctgacacagtc
attaagtacatgacagacggtatgctgctgagggagtgtttgattgactctgagctgggc
cagtatgccattatcatgttggatgaagcgcatgagaggacgatccacactgatgtcctc
tttggtctgctcaagaagactgtacagaagcgcactgacatgaagctgatcgtaacctca
gccactctggatgctgtgaagttttctcagtatttctatgaagcgcccatcttcactatc
cctgggagaacgtatccagtggaggttctttacaccaaggagccggagacggactacctt
gatgccagtctcatcactgtcatgcagatccacctgactgaacctccaggtgacatcctg
gtgtttctgactggacaggaagagatcgacaccgcctgtgagatcctctacgagagaatg
aagtcactggggcccgatgttcctgaactaattattctgcctgtttactctgccctaccc
agtgagatgcagactaggatctttgaccctgcacctccaggcagcagaaaggtggtcatt
gctaccaacattgcagaaacatctctgaccattgatggaatctactatgtagtagaccct
ggctttgtcaagcagaaagtctacaactctaagactggtattgaccagctggtggtgact
cccatctcacaggctcaggccaagcagagggcgggtcgagctggaagaacagggccaggg
aagtgttacaggctctacactgagagggcctacagagatgagatgctgacgaccaacgtg
cccgagatccagagaactaacctggccagcactgtgctgtctctgaaggcaatgggcatc
aatgacctcctgtcttttgacttcatggatgctcctccgatggagactctgatcacagcc
atggagcagctctacactctgggagctctggacgatgaaggcttactcacacggctcggt
agaaggatggctgagtttcctctggagccgatgctgtgtaagatgttgatcatgtccgtg
catctgggctgcagtgaggagatgctcaccatcgtgtcgatgctgtctgtgcagaatgtc
ttctataggcctaaggacaagcaggctctggctgaccagaagaaggccaagttccaccag
cccgagggtgatcacttgaccctgctggctgtctacaactcttggaagaacaacaagttt
tccaacccctggtgttatgagaacttcattcaggctcgctccctgcgcagagcccaggac
atccgcaaacagatgctgggtatcatggacagacgtaaactggacgtggtatcttgcggc
aaagccacggtgcgagtccagaaggccatctgcagcggcttcttcaggaatgcagccaaa
aaggatcctcaggagggctacagaactctcatagatcagcaggtcgtgtacattcacccc
tccagtgctctgttcaatcgccagcctgaatgggttgtgtatcatgagctggtactgacc
actaaggagtacatgcgagaggtgaccaccatcgacccccgttggctggtggagtttgct
ccagctttcttcaaagtgtccgaccccacacgcctcagcaagcagaagaaacagcagcgc
ctcgagcctctgtacaaccgttatgaggaacccaacgcctggagaatctctcgtgccttc
agacgccgctga
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integrated database retrieval system
