Monopterus albus (swamp eel): 109962934
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Entry
109962934 CDS
T05607
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109962934 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malb03400
]
109962934 (msh2)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109962934 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
109962934
NCBI-ProteinID:
XP_020460763
UniProt:
A0A3Q3IXF8
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVKELLLVKHYRVEVYRNHGKSSKEHDWKLEYKA
SPGNLTQFEEILFGGGTGAEGCAGVVAVRFATGADGQRVVGVGYVDAAQRKMGVCEFPDN
ETFSNLESLLVQISPKECLLAQGEANTESNKLREVVQRGGMLISDRRRAEFSSKDMVQDL
NRLLRAKKGESVASNTLPEFDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLGLGQYMR
LDNNAVRALNLFQGSPDDTSGAHSLAALLNKCRTPQGQRLVNQWLKQPLMDKTRIEERLD
LVESFVLDSELRQTCQEDLLRRFPDLHRLAKKFHRHTATLQDCYRVYQAVSQIPALITAL
ERYSGSYQVLLEAVFLSPLRDLQTDFTKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDMLEKSMQAVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIINIASGYVDPLQTLGDVIAQ
LDAVASFAMASVSAPVPYVRPRLLADGSRHIELLQARHPCMETDADTAFIPNDITFVQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSMIDSILVRVGAGDSQVKG
VSTFMSEMLETSAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGCFCLFA
THFHELTALAAQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGEKSEQEEEPEAKRRRTDKQVGEMLIQDFLEKVKSLPAAIMSE
EEVKAELRRMKHELVAKNNTYVAEILARCVHVKNA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcccaagcaaaacctgtctatggacagtgcagccgagcatggctttctt
aacttcattttctccatgccggagaaaccggacaccactttcagaatattcgaccgtaac
gactactacactgttcacgggaaagacgccatatttgcggcgaaggaggttttcaaaacg
aatggggtcatcaaatatttgggctcagggagtcgcaagctggagagcgtggtcctgagc
aagctgaactttgaagcctttgtgaaagagttgctgctagtgaagcactacagagtagaa
gtgtacaggaaccacggcaagagcagcaaggagcatgactggaagctcgagtacaaggcc
tctccaggaaacctgacacagtttgaggagattctttttggtggtggaactggagccgag
ggctgtgcaggagttgtagccgtccggttcgctacaggggctgatggacagcgtgtggtc
ggggtcggatacgtggatgcagcccagaggaagatgggagtgtgcgagtttcctgacaat
gagacgttctccaatctggaatctctgcttgtccagatcagccccaaagagtgtctctta
gcccaaggtgaagccaacactgagagcaataaactacgagaggttgtgcagcgtggaggc
atgttgatctctgataggaggagagctgagttcagtagcaaggacatggtccaggatctc
aacaggctgctaagagccaagaaaggagagagcgtggccagcaacacactgcctgagttt
gacaaacaggtggccatgtcatgcttggctgcagtggtgcgtttccttgagctgctctct
gatgagtccaacttcaactccttcagtctgaccactctgggcctgggacagtacatgagg
ctggacaacaacgctgtgagggctcttaacctcttccagggttcacccgatgacaccagt
ggagcccattcattggccgctctgttgaacaagtgccgtacaccacagggtcagcggttg
gtcaaccagtggctcaaacagccgctcatggacaaaaccagaatagaggagagactagac
ctggtggagagcttcgtgttggactcagagctcaggcagacctgtcaggaggacctgctg
cggcggtttcctgatctccaccgtctggcaaagaagtttcaccgtcacactgccacattg
caggactgctacagagtctaccaggctgtgagccagatccctgccctcatcacagccctg
gagagatactcggggagctaccaggttctgttggaggcagtgttcctctctcctctgaga
gacctgcagacggactttacaaagtaccaggagatgattgagacgactctggacatgaac
cagattgaccaccacgagttcctggtgaaggcttcatttgatcctgtgctgagtgagctg
agagaaaagatggacatgctagagaagagcatgcaggcagtgctgaacagtgcagccaga
gagctaggtctggatgctggtaagactgtgaagttggaatcgaatgccatgctgggtttt
tacctgagagtcacctgcaaggaggagaagagtctgaggaacaacaagaagttcacaacc
ctggatgtgcagaagaacggggtgcgcttcactaacagtaagctgagctctctgaatgag
gagtacactaagagcagagaggagtatgaagaagcccagaatgccatcgttaaagagatc
atcaacatcgcctcaggttatgtggaccccctgcagactctaggtgacgtgatcgcacag
ttagacgcagtggcgagttttgccatggcgtctgtctctgctcctgtgccgtacgttcgg
cctcgcctcttagctgacggcagcaggcatatagagctactacaggccagacatccttgc
atggagacagatgcagacaccgccttcatacccaacgacatcacctttgtccagggggag
aagagcttctatattataacaggaccaaatatgggtggcaagtccacatttatccggcag
gtgggtgtgatcgctctgatggctcagatcggctgctttgtgccatgtgaaaaggcggag
cttagcatgattgacagcattctggtcagggtgggagcaggagacagccaggtgaaagga
gtgtccacctttatgtccgagatgctggagacctctgccattctgcgctcggccacagag
aactcgctcatcataatcgatgagctcggcagaggcacgtccacgtatgacggcttcggt
ttggcctgggccatcagcgaacacatcgcctcaaagatcggttgcttctgcttgttcgcc
actcatttccatgagctgacggcgctggcggcacagcagcccactgtccacaacctgcac
gtcacagccctgacctcccacaacacactcactatgctgtatagagtcaaaccaggtgtg
tgtgatcagagttttggtatccacgttgccgagttagcttgcttccctccatctgtggtt
gccatggcaaaggagaaggcggaggaactcgaggagttccaggaacctgcgggggagaag
tcagagcaggaggaagagcctgaagccaaaagacgacgaacagacaaacaagtcggggaa
atgctgatccaggacttcctggagaaggtgaagtcacttcctgctgctatcatgagcgaa
gaggaggtgaaagcagagctcaggagaatgaagcacgagttggtcgccaaaaacaacacg
tacgtcgcagagatccttgcacgctgtgttcatgtaaaaaatgcttaa
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