Monopterus albus (swamp eel): 109963354
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Entry
109963354 CDS
T05607
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109963354 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
malb04131
]
109963354 (tgfbrap1)
Membrane trafficking [BR:
malb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109963354 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DUF7742
TPR-S
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
109963354
NCBI-ProteinID:
XP_020461468
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MSLCCRHERCLQRVDALAEMSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYVGTN
DCFIHHFLLDEVTSSKGKLTYSAQKLLHKYLGLKKPVTELHAASALERLIVLCDGIVFLV
DMVTLETVPSAAGGGAKIRGVTTFCINENPVNGDPFCVEMGVLSSKRRTVQIFMVYEDRV
QLVKEVTTPEQPCAVSVDGYFLCLALTTQYMILNYKTGASQDLFPYNSEERRPIVKRIGR
EEFLLAAPGGLGMFANAEGASQRAPVNWSESVIGATVCFPYVVALDESFITIHSMLDQQL
KQTVSFRDGHILQDFEGKVILASTKAVYVLVPLPLEGQIQDLLASHRVEEALILLEGAQR
NIPKDKFQILHKRILQQAGFIQFGQLQFLEAKEHFRRGQLDVRELISLYPLLLPASSSFT
RCHPPLHGFADLNHLAQGDQEKVLKCKKFLISYLGEVRSTEVANGCREDVDTALLKLYAE
QDHESLLDLLAADNACLLSDSIPWLEKYHKYFALGLLYHYNGQNSAALQLWIRVVDGDLQ
DSTRADLYEYIVDFLCTCSDLDLVWKYAGWALQKDPIIGVHIFTKRLIGKDQSELKPDDV
VIYLEKHSQALLLYLEYLVLERRIQKEKFHTHLAVLYLERVLSLLSKSPTDEKQLHGARE
RLQALLRESNLYRVQFLLGKIEKCEQLLLERATLHGKLEEHDKALHILVHKLRDFPSAEA
FCIWASSYRDSAYRQQLFHLLLGVYLDGIPSGKPQTAAGGGSGDLEMAAVDLLNRHGEVF
DAVRVLRMLPEGWSLQLLRPFLGRAVRASMHTCRTSQIAVGLARSENLQLLHDRLKERRK
PIFVSEKKGCHLCHNTFSEPDVVCLPGGVPVHTHCVAQRVRDPLTKRQLTNSSKHT
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttgctgcagacatgagcgctgtctgcagcgtgtagatgccttggctgagatg
agtgtgaaggcttttgagcttgtccccgctgtggagcgggatctcctcatgggtgacaaa
gctcgcatcaacattgagtgcattgaatgctgtggaaagcacttgtatgtgggcaccaat
gactgcttcatccaccattttctgctggacgaggtcacttcctctaaaggaaaactgact
tactcagctcagaagcttctgcacaaatacctgggcctcaagaaaccagttactgagctg
catgctgcctctgctttggagcgtttgatagtgctttgcgatggaatagtgttccttgtt
gacatggtgacactggagactgtgccctcggcggcaggaggtggagccaagataagaggt
gtgacaacgttctgcattaatgagaacccagtgaacggtgatccattctgtgtggaaatg
ggtgtactctcatccaagcgacggacagtgcagatttttatggtgtatgaggacagagtg
cagctggtcaaagaggtgactacgcctgagcagccttgtgctgttagtgttgacggttac
ttcttgtgcctggcacttactacacagtacatgatcctgaactacaaaacaggagcctcc
caagacctgttcccttacaacagtgaagagaggagaccgattgtgaagaggattggcagg
gaggaattcctcttagcagcgcctggtggtctgggaatgtttgcaaatgcagaaggggca
tctcagcgggctccagtcaactggtcagagagtgtgattggtgccactgtgtgttttccg
tatgtggtggctttggatgagagcttcatcaccatccacagcatgttggaccaacagcta
aaacagaccgtctcattcagggatggacacattctgcaagactttgaagggaaggtcatt
ttggcttccactaaggcagtgtatgtcctggtccccctgcccctggagggacagatccaa
gacttactggccagtcacagagtggaggaagcactcatcctcttggagggagcacagaga
aatattcccaaagacaagttccagattttgcacaaaagaatcctccagcaggcaggtttc
atacagtttggccaactacagtttctagaagcaaaagaacacttcaggaggggtcagctg
gatgtacgggagctgatatctctctaccccttactgctgccagcttcatcttcattcaca
cgctgccaccctcctctgcacgggtttgcagatctcaaccatctggcacagggagaccag
gagaaagtgctgaaatgcaagaaattccttatcagttatttgggagaggtacgaagcaca
gaggtggccaatggctgtagggaggacgtggacacagcactgttaaagctgtatgctgaa
caggatcacgagagccttctagacctgcttgctgcagacaatgcctgcctcctatcagac
agcatcccatggctagaaaaatatcacaaatattttgcacttgggttgctttatcattat
aatggtcagaattcagcagcacttcagttgtggattcgtgtggttgatggggatctgcaa
gattccacaagagctgatctttatgagtacattgtagactttctctgcacctgctccgat
ctggaccttgtttggaagtacgcaggctgggccttgcagaaggatcccattataggtgtt
cacatctttaccaagaggttgattggtaaagatcagtcagaactgaaacctgatgatgtt
gtcatttacctggaaaagcacagccaggcgctgcttctctacttggaatacctggtgctg
gagagaaggatacagaaagagaagttccacacacacctggctgtgctgtacctggagagg
gtcttgtcattgctgtcaaagtcaccaactgatgaaaagcagctccacggagctagagag
aggctccaagccctgctcagggagtccaacctataccgtgtccagtttcttttaggtaag
atagagaaatgtgaacaactgctgctagagcgtgcaacactacatggaaaactggaggag
catgataaagccctgcatatattggtgcacaagctcagagactttccgtccgctgaggcc
ttctgtatatgggcttcatcttatcgggattctgcttaccgacagcaactatttcacctg
ctcttgggggtgtatctagatggaatcccttctggaaaaccccagacagcagcaggaggt
ggcagcggagacctggagatggcagcagtggacctcctaaatcggcacggagaggtgttc
gatgcagtccgtgtcctgcgcatgctccctgaaggctggtcgctgcagctgctgcggccc
tttttaggtcgagctgtcagggccagtatgcatacctgccgtacttcccagattgctgtg
gggctagctcgctctgaaaaccttcaactgctacatgataggttgaaagagaggaggaag
cccatttttgtgtctgagaagaaaggatgccacctgtgccacaacactttcagcgagcct
gacgtggtgtgtctaccaggtggagtgcctgtccatactcactgtgtcgcccagagagta
agagaccctctgacaaagagacagttaactaatagcagtaaacatacgtga
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