KEGG   Monopterus albus (swamp eel): 109963867
Entry
109963867         CDS       T05607                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03013  Nucleocytoplasmic transport
malb04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109963867 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    109963867 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:malb03019]
    109963867 (seh1l)
   04131 Membrane trafficking [BR:malb04131]
    109963867 (seh1l)
Messenger RNA biogenesis [BR:malb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109963867 (seh1l)
Membrane trafficking [BR:malb04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109963867 (seh1l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 109963867
NCBI-ProteinID: XP_020462423
LinkDB
Position
Unknown
AA seq 414 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDSNVAYGGKVQIYEYNENTRKYAKAETLMTVSDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLIPMRKESSSTGPSKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMGNWKCTGILKGDGSPLTGSSSQPTAMSTVVGSSVQSSQNALNGMSAGRYYF
PPLDPPRAGTRYGHLLPPSSLIEHCDAEPIQPQPLVLARRPSRALLPLPEAEPQ
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgttcgtagcgcgtagtattgcagctgatcataaagatctaatccacgatgtgtcgtat
gattttcacgggcggagaatggcgacttgctccagtgaccaaagtgttaaagtttgggac
aaaagtgaaaatggagagtggcactgtacagccagctggaagacacacagtggatcagtg
tggagagtgacctgggctcatccagaatttgggcaggttctagcttcctgctcctttgac
aggacagctgctgtctgggaagagattgtaggggagtccaatgacaaacaaagaggactg
agccactggatcaaaagaaccacactagtggacagtagaacatcagtgactgatgtgaag
tttgccccaaaacacatgggactgatgttgaccacttgctctgcggacggagtggtgagg
atttatgaggctcctgatgtgatgaacttgagtcagtggtccctgcagcatgagatctcc
tgcaagctcagctgcagctgcatctcctggaatccctccagctcgcgtgcccatccacct
atgtttgcagtaggaagtgatgacagcaacgtagcgtacggtgggaaagttcagatttat
gagtacaatgaaaacacaaggaaatatgctaaagcagagacactgatgactgtcagtgat
gcagtccatgacattgcatttgctccaaacctgggaagatctttccatgttctcgccatt
gccactaaagacgtccgaatctttaagctcattccaatgaggaaggagagctcttctacg
ggacccagcaagtttgaggtgcagattgtggctcagtttgacaaccataactcccaggtg
tggcgtgtgagctggaacatcaccagcaccctgctagcctcctccggggatgatggctgt
gtgcgcctctggaaagccaactacatgggcaactggaaatgcacaggcatcctgaaggga
gacggcagcccactcactggttcatctagtcagcccactgccatgagcactgtggtgggc
tcttctgttcagagctcccagaacgcactgaacgggatgtctgcaggaaggtattacttt
ccacctctggatcctcccagagcagggactaggtatggtcacctgctgcctccctcctcc
ctcatagagcactgtgatgctgagcccattcagcctcagccactggttcttgcccgcaga
ccctctagagcactgctgcccttaccagaggctgaaccacagtaa

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