Monopterus albus (swamp eel): 109964361
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Entry
109964361 CDS
T05607
Name
(RefSeq) collagen alpha-1(XIII) chain-like isoform X1
KO
K16617
collagen type XIII alpha
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
malb00536
]
109964361
Glycosaminoglycan binding proteins [BR:
malb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109964361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109964361
NCBI-ProteinID:
XP_020463268
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MFNMEEDQKWGVAGKATEDRRTRCEQRQQPSKQHLWRTLRDLSGITICIAVFVLCLGVCL
VIFIRTSELQSRILSLEQQQRDAQLSAWMLSLEQVEPVILGRLDQILEEKLAVRLPKTRE
VREAPHNCLCPPGPPGPPGRAGFLGDKGSMGIPGRRGLKGQAGDKGAPGEPGLSIIGPRG
PPGQPGTRGFPGFPGPIGLDGKPGQNGQKGEMGQRGPTGLPGDPGPKGEKGVCGDYTHRG
LFVQDLPLKTLAALRSSQALMLKQGEPGAQGPPGPPGPPGSPGTPGLNGASGPPGKPGEP
GKPGKDPRLLPGLKGEPGVPGQKGDQGDVGFPGPEGPKGVKGDPGIKGEKGAPSIKGEPG
SPGLPGLMGPKGDRGDPGDKGDAGPEGPAGPRGAPGPNGEPGKTDIHNNENDIRNIPLMG
PPGLPGPPGAPGAKGEVGLPGPPGLDGEKGLRGKPGEPGPAGPVGPEGPRGEGGVMGFPG
PKGDKGDMGPSGSPGLDGPTGEKGATGVPGPIGLPGAMGPKGEPGELGRSDRIYGPPGPP
GPPGPVGPAGSQGPSGPKGEPGIGLRGERGATGQKGDKGDRGHLGLPGAHGLDGRPGPVG
LIGPAGLPGPAGPKGERGEKGDAGLPGPTGPQGIPGLVGPQGLKGNRGERGKKGNRGAKG
DKGDQGAPGLDAPCPLGDDGLPVPGCWNK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatggaagaggatcagaagtggggagtcgctggtaaagcgaccgaggacagg
aggacacgctgcgagcagcggcagcaaccttcaaagcagcatctgtggagaaccttgcga
gatttgtccggcataacgatttgcattgcagtatttgttctgtgccttggagtttgcctt
gtaatttttatacggacgtcagagttgcagtccaggatattaagtctggagcagcagcag
cgggacgcgcagctctcagcctggatgttgtctctggagcaggtggagcccgttatcctg
ggccgactggaccagatcctggaggagaagcttgcagtgcgactgccaaagacgagggag
gtgagggaagctcctcacaactgtctgtgccccccaggacctccaggtcctcctggacga
gcaggctttctgggtgacaaaggaagtatggggattcctggcagaaggggcttaaaagga
caagcaggggacaagggagcaccaggggagccaggtctgtccatcattggaccaagagga
cctcctggacaacctggaacaagaggatttccaggcttcccaggtccaattgggttggat
ggcaagcctggacagaatggacagaagggggaaatggggcagcgtggtcctacaggactg
ccaggggaccctggacccaaaggggagaagggtgtatgtggagactacacacaccggggc
ctctttgtgcaggaccttccattgaaaaccctggctgccttgcgatccagtcaggctctt
atgttgaagcagggcgagcctggagctcagggacccccaggacctccagggccccctgga
tccccagggacgccaggcctgaacggagccagtggcccaccaggtaagcctggtgagccg
ggcaagccaggaaaagacccaaggcttttaccaggactgaagggtgagccaggtgtgcca
ggacaaaagggtgatcaaggtgatgtcggctttccaggccccgaaggcccaaagggagtt
aagggagatcccggtattaagggtgagaagggagcaccaagcattaaaggagaaccaggt
tcacctggattgccaggcctaatgggacccaagggtgacagaggtgacccaggagacaag
ggggatgcaggccctgaaggcccagctggaccaagaggtgctccaggcccaaatggagaa
ccaggaaagactgatatccacaacaatgaaaatgacattcgcaacatacccctgatgggt
ccccctggtttacctggacctccaggggcccctggtgccaagggtgaagttggtctacca
ggtcctccaggactggatggtgagaagggactcagagggaagcctggagagcctggtccc
gcaggtccggtcggtcctgaaggtcctagaggggagggtggtgtcatgggcttcccagga
cccaagggagacaagggagacatgggtccatctggatcacctggtttagatggccctact
ggtgaaaagggggctacaggggtccctggccctattggattacctggtgcaatgggtcct
aaaggtgagcctggagaattgggaaggtcagacaggatctacggtcctccagggccccca
ggacctccaggaccagttggcccagcaggatctcagggaccatcagggcctaaaggagag
ccaggcataggtctcagaggagaaaggggagcaactggtcagaagggtgacaagggagac
agaggccacctgggactccctggggctcatgggttagacggcagaccgggtccagtgggt
ctaataggaccagcaggattgccggggccagcaggaccaaaaggagagcgaggtgaaaag
ggagacgcaggattaccaggaccaactgggcctcagggcatccctggcttggtaggacca
caaggactcaaagggaaccggggagagaggggcaagaaaggcaacaggggggccaaaggg
gataagggagaccaaggagcacctggattagatgccccctgtccgttgggggacgatggc
ttacctgtaccaggatgttggaataaatga
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