Monopterus albus (swamp eel): 109964453
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Entry
109964453 CDS
T05607
Symbol
ercc3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03022
Basal transcription factors
malb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109964453 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
109964453 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malb03021
]
109964453 (ercc3)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109964453 (ercc3)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109964453 (ercc3)
Transcription machinery [BR:
malb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109964453 (ercc3)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109964453 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
109964453
NCBI-ProteinID:
XP_020463409
UniProt:
A0A3Q3JNJ1
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MGKKDRDREKKSKKRFYEEEDDDEEVLGTESQQAIPASAGKQVDESSTKLDEYGAKDYRV
QMQLKNDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPNHIHEYKLTAYSL
YAAVSVGLQTSDIVEYLQKLSKTSVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESAFPD
VIQRLLQDSVIRECRLRSADGTDTELITEVIQSKSAISKSVQEKGGTSTSQQPGDGQVST
QQIPEDIYTYYEQMDKDEDEEEETQTVSFEIRQEMIEELQKRCIQLEYPLLAEYDFRNDT
VNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LILGNSSVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSW
EAERVMEWMRSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPTKF
RACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMDQEDLMFSTRDEQQQLLQKVLAASD
LDAEEEVVAGEVGPRQFSRRTGTMSSMSGADDTVYMEYQSRSSKASAASKSIHPLFKRFR
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaggatagagatcgggagaagaagtccaaaaagcgtttctatgaggaggaa
gatgatgatgaagaagttttgggcactgagtctcagcaggccatacctgcatctgcagga
aaacaagtggatgagtccagtacaaaactggatgagtatggagccaaagactaccgtgtt
cagatgcagctaaagaatgatcactcttcacgtcccctctgggtggctccagatggacac
atttttctggaagccttctcacctgtgtataagtacgcccaggacttcttggtggccatt
gcagaaccagtgtgcaggcctaaccacatccatgagtataagttgacagcttattccctg
tatgcagctgtcagtgtggggctgcagacctctgatattgtagagtacctgcagaaactc
agcaagacatctgtacctgatggaatcattcagttcattaagctctgcacagtgagctat
ggtaaagtcaagctggtgcttaagcacaataggtattttgttgagagtgccttccctgat
gtgatccagcgccttctgcaagacagcgtgatccgtgaatgtcgtcttcgttctgcagat
ggaacagatactgagcttattactgaagtcatccaaagcaagtcagcgatctccaagtct
gttcaggaaaagggaggtacttccacctcacagcagcccggcgatggacaagtttcaacc
cagcagatccctgaggacatctatacctactatgagcagatggataaagatgaggatgaa
gaggaggagactcagactgtctcttttgagattcgccaggagatgattgaagaactgcaa
aagcgttgtattcagctggagtaccccctcctcgcagaatatgactttcgtaatgataca
gtcaacccagacatcaatatagacctgaaacccactgctgtgctgcggccctaccaggaa
aagagtctgcgcaagatgtttgggaatggacgcgctcgctccggggtcattgtgctgccc
tgcggagccggcaaatctctggtgggtgtgacggcagcatgcacggtgcgtaaacgctgc
ctaatcttgggtaactcctctgtgtcagtggagcagtggaaggcccagttcaagatgtgg
tccaccatcgatgactctcagatctgccgtttcacatccgatgccaaggacaagcccatc
ggatgctcagtagccatcagcacttactccatgctgggtcataccaccaagcgctcgtgg
gaggctgagagggtcatggaatggatgcgcagtcaggagtggggactcatgattctggat
gaggtgcacactattcctgccaagatgtttcgtcgtgttctgaccattgtgcaggcacac
tgcaaactcgggctcactgcaacactggtcagggaagatgacaagattgttgacctcaac
ttcttaattgggcctaagttatatgaggccaactggatggaactgcagaacaatggttac
attgccaaagtccagtgtgcagaggtgtggtgccctatgtctccagagttttacagagag
tatgtggccatcaagacaaagaaacgcatcctgctttataccatgaaccccactaagttc
cgtgcttgccagtttctcattcgattccatgagcggcgcaatgacaagatcattgtcttt
gctgacaatgtgtttgcgttgaaggaatacgccattcgcctcaacaagccttacatctat
ggtccaacctctcagggggagcgcatgcagattttacagaacttcaaacacaaccccaag
atcaacacaattttcatctccaaggttggagacacctcatttgacttgccagaagccaat
gttcttatccagatctcctctcatggtggatcccgcagacaagaggcccagaggcttggc
agagtcttacgagccaagaaaggaatggtagcagaggagtacaatgcatatttctattca
ctggtgtcccaggatacccaggaaatggcttactccactaagaggcagaggttcctggta
gaccagggatacagctttaaggtgataacaaagttggctggcatggaccaagaggactta
atgttctccaccagagatgagcaacagcagttgcttcagaaggtcttagctgcttctgat
ctggatgctgaggaggaagtggttgcaggggaggtgggcccgcgacagttctcaaggcga
acaggcacaatgagctccatgtcaggtgccgatgacactgtctacatggaatatcaaagc
cgaagcagcaaggcctctgcagcaagcaagagcattcatccactgttcaagcgcttcaga
aagtag
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integrated database retrieval system
