Monopterus albus (swamp eel): 109964645
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Entry
109964645 CDS
T05607
Name
(RefSeq) embryonic polyadenylate-binding protein-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03015
mRNA surveillance pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109964645
09123 Folding, sorting and degradation
03018 RNA degradation
109964645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109964645
03041 Spliceosome [BR:
malb03041
]
109964645
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109964645
mRNA cycle factors
Stress granule specific factors
109964645
Spliceosome [BR:
malb03041
]
Complex C
Other components
Complex C specific factors
109964645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_Nup35
RBD_DEAH11
RRM_5
RRM_occluded
RRM_3
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
109964645
NCBI-ProteinID:
XP_020463757
UniProt:
A0A3Q3KD78
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MMNSSGPAYTLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINF
QQPADAECALDTMNYDILKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTF
SVFGSILSCKVVCDERGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVQKTARHQLESV
FVNPKAHFLGEKCQLFLRSFVGNFKSRKEREVEFGTKAMKFTNVYIKNFGEDYSDEKLKE
VFSAFGRTLSVRVMKDERGHSRGFGFVNYANHEDAQKAVEEMNGKEINGKVIYVGRAQKR
LERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDGIDDERLRKEFAPYGTITSAKVMTDG
SQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQRLATL
RTMTSSIIDSYQQAGYYMSVPQPPTRSFYNHSAISNMRPVPSWTGQPLRTQGPYSTHFVG
NSVSRRGSATIATVRQASTQAPRIVNSAQKTNNIGTQTVGGRTDMPVVARSSQYRYSPAV
RNPQQVVSVPAPMTRLQVVSAHVKDPPVNVQGQEPLTASMLAAAPLMDQKQLLGERLYPL
IHALHPNLAGKITGMLLEIDNSELLHMLESPESLHAKVEEAIAVLQAHQAKERSKK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagcagtggaccagcgtatacccttgcctctttatatgtaggggacctgcat
cctgatgttactgaggctatgctctatcagaaattttcccctgctgggccgatcatgtca
attcgtgtgtgcagagacattatcacccgcagatctctgggatatgcctacataaacttc
cagcaaccagctgatgcggagtgtgctctggatacaatgaactacgacattctcaagggt
cggccaatccgaataatgtggtctcagcgagaccctgggctcaggaagtctggtgtgggt
aacatctttatcaagaacatggatgagtctattgacaacaaggcactatatgataccttc
tcagtctttggcagtattttatcctgcaaggttgtttgtgacgagagaggatccaaaggc
tatggctttgttcactttgagactcaggaagctgcaaaccgggccattgaaaccatgaat
gggatgctgctgaatgacaggaaagttcaaaagacagctagacatcagttggaatctgtc
tttgtcaacccaaaggcccatttcctgggagaaaaatgtcagttgttcctgcgtagtttt
gttggcaacttcaagtcccgcaaggaaagagaggttgagtttggcaccaaagcgatgaag
ttcaccaatgtctacatcaaaaactttggtgaagactactctgatgagaaactaaaggaa
gtcttctctgcatttgggaggactcttagtgtgcgggtgatgaaggacgagagggggcac
tcacgaggatttggctttgtgaactatgccaaccatgaggatgctcagaaggcagttgaa
gaaatgaatggaaaggagatcaatgggaaagtcatttatgtcggccgcgctcagaagcgt
ctggaacgccagggggagctcaaacgcaagtttgaccagatcaaacaggaccgcatccaa
cgctatcagggggtgaatctgtatgtgaagaatctggatgacggcatagatgacgagaga
ctccggaaggagtttgccccttatggcacgatcacaagtgccaaggtgatgaccgatggt
tcccaaagcaagggctttggctttgtttgtttctcttcacctgaggaagcaacaaaagca
gtaactgaaatgaacgggagaattgttgcaaccaagccgctgtatgtggctctggctcag
cggagagaggagcgtaaagccatccttaccaacaaatacatgcagagacttgctaccctg
aggaccatgaccagttccatcattgactcgtaccagcaggctggatactacatgagtgta
ccacagcctcccacacgctccttctacaaccacagtgccatcagcaacatgagaccggta
ccttcttggacaggacagccactgagaacacagggcccctactcaacccactttgttggt
aattctgtttcgcgacgtggatcggcaacaatcgctacagtcagacaggcttccacccag
gctccacgtattgtcaattctgcacagaagacaaataacattggaacccagactgttgga
ggacgtactgacatgcctgttgtagccagaagcagccagtacaggtactctcctgcagtg
aggaaccctcagcaggttgtttctgttcctgcacccatgacaagactacaggttgtttct
gctcatgtgaaggatccaccagtgaatgttcaaggccaagagccgctcactgcctcaatg
ctggctgcagctccactcatggatcagaaacagcttctcggtgagcgattgtacccacta
attcatgcccttcacccaaacctggctgggaaaatcactggaatgctgctggagatcgac
aactcagagctgctgcacatgttggagtcacccgagtccctgcacgctaaggtggaggaa
gcaattgctgtcctgcaggctcaccaggcaaaggaacgatctaagaaatga
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