Monopterus albus (swamp eel): 109965356
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Entry
109965356 CDS
T05607
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04510
Focal adhesion
malb04512
ECM-receptor interaction
malb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109965356
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109965356
09142 Cell motility
04820 Cytoskeleton in muscle cells
109965356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
malb04147
]
109965356
00536 Glycosaminoglycan binding proteins [BR:
malb00536
]
109965356
Exosome [BR:
malb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109965356
Glycosaminoglycan binding proteins [BR:
malb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109965356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109965356
NCBI-ProteinID:
XP_020464945
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MHGQHNKGLKNLRLLLLCLSVAVLASGAHAGVKKHSGPCGGRDCSGGCQCFPEKGARGQP
GPLGPQGPQGPPGRPGDPGIQGPKGHKGDRGRDGNMGPKGNVGMTGVPGFSGKVLILYVM
GFDLMIALQGHPGQPGPRGKTGADGCNGTQGEPGLPGNHGYTGAPGFSGTPGRKGEKGDS
MVLNIYMEGYRGDPGTPGINGISGPPGQPGVQGNIGIPGPKGPPGSPGPRGPKGSMSRII
KGVKGEQGDIGAQGPPGNHTYQVVEPKLGAQGEKGLKGERGDLADNKGETGVTGFTGPRG
PPGAYGRPGPRGDPGDRGPNGRGGLKGVRGEPGELINESWTSRAGLPGLHGEPGPQGERG
PIGDQGIPGPPGLSASETQQQVFDFFGPFGIEGDLGEKGQQGERGFPAFGEALPGARGRQ
GAAGGPGPKRTWGDFFKGVAGERGRPGNAGYKGPKGDQGECQCTGRSRLGPPGPAGDQGD
AGMSGEFGQEGDLGDPGPRGNDGLPGFPGISGVPGPKGQKGDTRIITEKGSRGDPGDPGQ
SGEPGASGAPGPNGLPGFRGTRGLPGEGPWGVRGDKGFPGLTGQPGAPGLAGEPGAIFGG
IKGQRGLPGDDGFAGYNGVQGAPGSPGGCRPAGDGGQVDVTGPCNPVPGPPGPPGPPGGS
GLPGSPGKAGLPGLHGEPGPQGERGPIGDQGIPGPPGLSASETQQQVFDFFGPFGIEGDL
GEKGQQGERGFPAFGEALPGARGRPGAAGPPGPKRTWGDFFKGVAGERGRPGNAGYKGPK
GDQGECQCTGRSRLGPPGPAGDQGDAGMSGEFGQEGDLGDPGPRGNDGLPGFPGISGVPG
PKGQKGDTRIITEKGSRGDPGDPGQSGEPGASGAPGPNGLPGFRGTRGLPGEGPWGVRGD
KGFPGLTGQPGAPGLAGEPGAIFGGIKGQRGLPGDDGFAGYNGVQGAPGSPGGCRPAGDG
GQVDVTGPCNPVPGPPGPPGPPGGSGLPGSPGPKGQKGQEGPLGLQGQKGETGDRGTGGH
PGPPGFTGPRGDLGVPGTKGSVGDPGVPGVSGHHGAQGEKGVHGEILDALPGPSGDPGLP
GRQGNKGLDGDKGEQGYQGMVGMPGMIGFKGESGTVGLQGEEGKPGPAGKYGFPGDPGRA
GPPGPHGATGQPGFTGERGTEGDPGPPGPVGLKGVPGAYGDDGAFGQFGPTGDPGQRGAG
GRPGLPGVKGQKGQPGMSGFQGNRGDPGVKGFSGPKGKPGEPGQVGPKGMKGYSGEKGDR
GVRGPPGEKPHIHPQMIKEMKGIKGDPGPQGNQGSQGMKGYKGSPGATGSQGKHGNPGDP
SNKKGEQGDPGPQGLPGIKGMPGVTGNRGIVGFQGMPGDKGTKGGPGAYGASGDPGKKGA
KGDRGPIIDLPGSPGLRGEGGCQGELGNKGQVGVTGDRGIPGEDGIEGKKGESGNSGTPG
YSGSEGQKGTPGNQGQKGLPGFPGQDGKKGFPGFPGTKGFPGLKGLYGLDGLKGQKGSPG
TPGVDITGPTGEPGAKGEKGDSGDTDNRPGVKGTPGLKGFQGALGDHGLPGLPGFRGPIG
PNATADRPGSRGDPGSIGSRGYQGFPGPRGLPGVDAPPGEKGIPGSLGSPGVTGWKGLKG
NQGQFGYRGPNGVSGKKGVKGEQGVMGVPGTIGVKGERGPAGPKGNTGPPGVRGFPGNQG
PPPVPIRYPGERGPSGPMGIQGPKGIIGEPGPRGPHGDAGFIGPAGQKGMPGISGTPGIP
GLRGDVGQMGHPGLQGMEGQRGNTGIPGLPGMPGRSVSVGYLLVKHSQTDQTPMCPVGMS
KLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRVSTMPFLYCNPGDICYYASRNDKSYWLST
TAPLPMMPVEEAEIKPYISRCSVCEAPSVAIAVHSQDITIPQCPAGWRSLWIGYSFLMHT
AAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAKGTCHYFANKNSFWLTSIDQAFHTEPSA
ETLKAGQLLSRISRCQVCMKNL
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgcacggacaacacaacaaagggctgaagaacctgaggctgctgcttctgtgcctctcc
gttgccgtcctcgcctcaggagcgcacgcaggtgtgaagaagcacagtggcccctgtgga
ggaagagactgcagcggaggctgtcaatgcttcccagagaagggtgccaggggtcaacct
ggaccacttggtcctcagggtccacaggggcctccagggagaccaggtgatccaggcatc
cagggaccaaaagggcacaaaggtgatcgtggccgtgatggtaacatgggtcctaaagga
aatgtgggaatgactggtgttcctgggttttctggaaaggtattgattctgtatgtgatg
ggttttgatttgatgattgctctgcagggccacccaggacaacctgggcccaggggcaaa
acaggtgctgacggctgtaacgggacacagggagaaccagggttaccgggaaaccacggc
tatacaggtgcacctggtttttctggaactccaggcaggaagggagagaagggagactct
atggtgctgaatatatacatggagggttacaggggagatccaggcactccagggatcaac
ggaatatccgggcctccaggacaaccaggagtgcagggtaatataggcatcccaggacca
aagggtcccccagggtcccccggccccagagggccaaagggctctatgtccagaataatt
aagggagtcaagggagagcagggagacattggagcacaagggccaccaggaaaccatact
taccaggttgttgagcccaaactgggagctcaaggagagaaaggtctgaaaggagaaaga
ggagatctggctgacaacaaaggagaaactggtgtaacaggattcactggaccacggggt
ccacctggtgcatatgggcgtcctggaccaagaggggatcctggtgacaggggaccaaat
ggcagaggtgggctcaagggggttagaggtgaaccaggagaactgattaatgaatcctgg
acctcaagggctggtcttcctggtctgcatggtgaaccgggtccacagggagagaggggt
ccaataggagatcaaggcatccctggaccccctggactttctgcctctgaaacacagcaa
caagtgttcgacttcttcggaccatttggtatagaaggggatctaggagagaagggccaa
caaggagaacgaggattccctgcttttggtgaagcactcccaggcgcgagaggccgtcaa
ggggccgcaggtggtccaggacccaaaagaacatggggtgacttcttcaagggtgttgca
ggcgagagaggaaggcccggcaacgcaggctataaaggaccaaaaggtgatcaaggagag
tgtcagtgcactgggcggtccagactggggccacctggccctgctggtgaccaaggtgat
gctgggatgtctggggagtttggtcaggagggtgatttaggggacccaggtccccgagga
aatgacgggttgcctggatttcctgggatcagtggtgtgccaggcccaaaaggccaaaaa
ggagacacaagaataatcacagagaaaggaagtcgtggcgatccaggggatcctgggcaa
agcggggagccaggagcgtcaggcgctccagggccaaacggtttgcctggttttaggggg
acccgaggtcttccaggagagggcccctggggagttcgtggagacaagggtttccctggc
ctaactggtcaacccggtgcacctgggctggcaggagaaccaggtgcaatctttgggggt
atcaaaggccaacgtggtttacctggtgatgacggtttcgcaggctataatggagttcaa
ggagcacctggaagcccaggtggctgtagaccagcaggagatggaggacaggtggatgta
acaggtccatgcaatccagttccaggaccccctgggccacctggacctcccggaggcagt
ggattaccaggttccccaggtaaagctggtcttcctggtctgcatggtgaaccgggtcca
cagggagagaggggtccaataggagatcaaggcatccctggaccccctggactttctgcc
tctgaaacacagcaacaagtgttcgacttcttcggaccatttggtatagaaggggatcta
ggagagaagggccaacaaggagaacgaggattccctgcttttggtgaagcactcccaggc
gcgagaggccgtccaggggccgcaggtcctccaggacccaaaagaacatggggtgacttc
ttcaagggtgttgcaggcgagagaggaaggcccggcaacgcaggctataaaggaccaaaa
ggtgatcaaggagagtgtcagtgcactgggcggtccagactggggccacctggccctgct
ggtgaccaaggtgatgctgggatgtctggggagtttggtcaggagggtgatttaggggac
ccaggtccccgaggaaatgacgggttgcctggatttcctgggatcagtggtgtgccaggc
ccaaaaggccaaaaaggagacacaagaataatcacagagaaaggaagtcgtggcgatcca
ggggatcctgggcaaagcggggagccaggagcgtcaggcgctccagggccaaacggtttg
cctggttttagggggacccgaggtcttccaggagagggcccctggggagttcgtggagac
aagggtttccctggcctaactggtcaacccggtgcacctgggctggcaggagaaccaggt
gcaatctttgggggtatcaaaggccaacgtggtttacctggtgatgacggtttcgcaggc
tataatggagttcaaggagcacctggaagcccaggtggctgtagaccagcaggagatgga
ggacaggtggatgtaacaggtccatgcaatccagttccaggaccccctgggccacctgga
cctcccggaggcagtggattaccaggttccccaggtcctaaaggccaaaaaggacaagag
ggtccacttggattacagggacagaaaggagaaacaggagatcgaggcacaggaggccat
cctggaccaccaggttttactggcccccgtggtgacttgggagttcctggcaccaaaggt
tcagtaggagaccctggtgtgcctggcgtttctggacatcacggggcacaaggtgagaag
ggtgttcatggagaaatcttggatgcactacctggaccctctggtgacccagggctgcct
gggcgtcaaggaaataaggggctggatggagataaaggagagcaaggctatcaagggatg
gttggcatgcctggaatgattggcttcaagggtgagagtggcactgtaggtctgcagggg
gaggaagggaagcctggaccagctggcaagtatggcttccctggtgaccctgggagagca
ggtccacctgggccacatggtgccactggacagccaggtttcactggagaaaggggaact
gagggagacccaggtcctccaggtccagtcggcttaaaaggggtcccaggtgcatacggt
gatgatggtgcctttggacagtttggtccaacgggtgacccaggacagcggggtgcaggt
ggacgcccaggacttccaggagtgaagggacaaaaagggcaacctggcatgtcaggtttt
caggggaacaggggcgatcctggggtaaagggcttcagtgggccaaaaggaaaacctgga
gagccaggccaagttggcccaaaaggaatgaaaggttatagtggagagaaaggtgatcgt
ggtgtgagggggccacctggggagaagcctcacatccatccccagatgattaaggagatg
aaaggtatcaaaggagaccctggacctcaaggaaatcaaggatctcaagggatgaaaggt
tataagggttctcccggtgcgacaggcagccagggaaaacatggtaatcctggagatccc
agcaataagaaaggtgaacaaggagatccaggtccacaggggctgcctgggataaaagga
atgccaggcgtaactggaaatagaggaattgttggttttcagggaatgcctggagacaag
ggaactaaaggaggtcctggtgcctatggcgcatcgggagacccaggaaaaaagggtgcc
aaaggtgatagaggcccaattatagaccttccaggatctcctggattgagaggagagggt
ggttgtcaaggagagctaggcaataaaggacaagttggggtgactggcgacaggggtata
cctggtgaagatggtattgaaggtaaaaagggagagtcaggaaattcaggaacaccagga
tactcaggctcagaagggcagaagggaactcctggtaaccaaggtcaaaaaggccttcct
ggatttcctggacaagacggaaaaaaaggttttcctggcttcccaggaaccaaaggcttc
cctggcctgaagggtctttatggattagatggactgaaaggacagaagggaagcccagga
acaccaggtgtggacatcactggacccactggggaaccaggagccaaaggagagaaggga
gatagcggtgacactgacaaccggccaggtgttaaaggcacaccgggtttgaaaggcttc
cagggagctctaggtgaccatggtctacctggactaccaggattccgcggccccatagga
ccaaatgcgactgcagacaggccaggatccagaggggaccctggctctataggatctaga
ggataccaaggtttccctggacccagaggattgcctggtgtggatgctccccctggagaa
aagggcataccaggatcattagggtctcctggagtcactggttggaaaggattaaaggga
aatcaagggcaatttggataccgggggcctaatggtgtttctgggaagaaaggagtgaaa
ggagagcaaggagtgatgggagttcctggtactattggtgtgaagggagaaagaggacca
gctggcccaaagggaaacactggacccccgggtgttcgtgggttcccaggtaaccagggt
cctcctccagttcccatcagatatccaggagagaggggcccttcagggccaatgggtatc
caaggaccaaaggggatcataggtgaaccagggccacgtggcccccatggagatgcaggt
ttcataggacctgctgggcagaagggcatgcctgggattagtggtacaccaggaatacct
ggactccgtggagatgttggacaaatgggccaccctggtctgcaaggcatggaaggtcaa
cgtggcaacactggtatccctgggttaccaggtatgcctggccgcagtgtcagtgtgggt
tacttgctggtgaaacacagccaaacagaccagacgcccatgtgccctgtgggcatgtct
aaactgtgggatggctacagtctgttatacttcgagggacaggaaaaggcccacaaccag
gatcttggcttggctggctcctgcctcccacgggtcagcaccatgcctttcctgtactgc
aatcctggagacatttgttactatgccagcagaaatgataagtcctactggttgtcaaca
actgctcctcttcctatgatgcctgtagaagaggcggagatcaaaccatacatcagccgc
tgttcagtatgcgaagctccatcagttgccatagcagtgcacagccaggatatcaccatt
ccacagtgtcctgcgggatggcgcagcctgtggatcggctattccttcctcatgcataca
gcagcaggaaatgaaggtggaggtcagtctttgtcatcgcctggctcctgcctggaggac
ttccgcacaacaccattcattgagtgtaatggggccaaaggcacatgccactactttgct
aacaagaacagcttctggctaacctccatagatcaggcgttccacactgagccatcagca
gagactctcaaagcaggtcagctcctgtcacgcatcagccgctgccaggtctgcatgaag
aacttgtga
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