Monopterus albus (swamp eel): 109966282
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Entry
109966282 CDS
T05607
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109966282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109966282
03009 Ribosome biogenesis [BR:
malb03009
]
109966282
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109966282
Spliceosome [BR:
malb03041
]
Complex A
U1 snRNP components
U1 related factors
109966282
Complex B
109966282
Ribosome biogenesis [BR:
malb03009
]
Eukaryotic type
Pre-60S particles
Helicases
109966282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109966282
NCBI-ProteinID:
XP_020466669
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGNRGGPPSGKFGNPGERLRKKHWNLDELPKFQKN
FYQEHPDVTRKPLQEVEQYRRSKEVTVKGRDCPKPIVKFNEAAFPSYVMDVIIKQNWTDP
TPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKDY
VQINIGALQLSANHNILQIVDVCSDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDEL
TRRMRRDGWPAMGIHGDKSQQERDWVLNXXXXXXXXXXXATDVASRGLDVEDVKFVINYD
YPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAED
RGGRGRGGRGGYKDDRRDRYSGGGRSNFGGSSYRDRDRDSDRGYGSGPKSAFGGSKAQNG
GSYGGNSGNSSGSYSNNNYSNSNGQGNFGAPANQVGAFGNQSFQGPPQFGGMQRATQNGM
NHPPFPFNSQPPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggttttcagacagagatcgtggcagagatagagggtatggtggagggcccccg
cgttttggtggtggtggaggcaataggggcggacctccttcaggaaagtttggcaaccct
ggtgagaggctgcgaaagaagcactggaaccttgatgagcttccaaagtttcagaagaac
ttctaccaggaacacccagatgtcacccgcaaacctcttcaagaggttgagcagtaccga
agaagtaaagaagttacggtcaaaggcagagattgccccaaaccaattgtaaaattcaat
gaagctgcatttccaagctatgtcatggatgttataataaaacagaactggactgaccca
actccaattcagtctcaggggtggccagtggccctcagtggcaaagatatggttggcatt
gctcagactgggtctgggaaaacccttgcataccttctgcctgcaattgtgcacatccaa
catcagccattcttggagcatggagatggacctatttgcttggtgctagcgccaacccgt
gaactggctcaacaggtgcaacaggtggctgctgaatatggtagggcctcccgtctgaag
agcacctgcatctacggaggcgcacccaaaggaccccagatcagggaccttgagagaggt
gttgagatttgcattgctaccccgggtcgtctcattgacttcttggaatgtggaaagacc
aatctgcgtcgttgcacctacctggtgctggatgaagctgatcgcatgctggacatggga
tttgaacctcagatccgcaagatagttgaacaaattcggccagaccgtcagaccctgatg
tggagtgccacctggcctaaggaagttcgccaactggctgaggatttcctgaaggactat
gtccagatcaatattggagcactgcagctcagtgccaaccacaacatcctgcagatagtt
gatgtttgcagtgatatggagaaagaggacaaactgattcgtttactggaggaaataatg
agtgaaaaagagaacaagaccattatttttgtggagaccaaaaggcgttgtgatgagctt
accaggaggatgagacgagatgggtggccagcaatgggaattcatggagacaagagccag
caggagagggactgggtccttaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgct
acagatgtggcctcccgtggcttagatgtggaggatgtgaaatttgtcatcaattatgac
taccctaactcctccgaggattatatccaccgcattggacgcacagcccgaagtcaaaaa
acgggcacagcctacaccttcttcacccccaacaacatgaaacaagccagtgacctgatc
tctgtgctccgcgaggccaaccaggccattaaccctaagctgatccagatggcagaggac
agaggaggtcgtggaagggggggaagaggtggctacaaagatgaccgtcgggataggtat
tctggcggtgggaggagcaactttggtggtagtagctatagggacagggacagggacagt
gacagaggttatggcagtgggccaaagagtgcctttggtggcagtaaggcccaaaatggt
ggcagctatggaggcaacagtggtaactctagtggtagctatagcaacaacaattatagc
aacagcaatggacagggtaattttggtgctccagcaaaccaggtgggtgcctttggtaac
caaagctttcagggcccccctcagtttgggggtatgcagagggccactcagaatggcatg
aaccacccaccattccccttcaattctcagcctcctccaccacaggcccagcagccacca
cccccaccaccaatggtgccctaccccatgccaccacccttcccacagtaa
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