Monopterus albus (swamp eel): 109966436
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Entry
109966436 CDS
T05607
Symbol
blm
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03440
Homologous recombination
malb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109966436 (blm)
03460 Fanconi anemia pathway
109966436 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malb03032
]
109966436 (blm)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109966436 (blm)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109966436 (blm)
DNA replication proteins [BR:
malb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109966436 (blm)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109966436 (blm)
Bloom's syndrome complex (BTR)
109966436 (blm)
FA (Fanconi anemia) pathway
109966436 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
BDHCT_assoc
DUF1178
Motif
Other DBs
NCBI-GeneID:
109966436
NCBI-ProteinID:
XP_020466925
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MSSVPQNNLEEQLARHSSAAQSKLSLAKPKTGGFSFKKKSPSGTAKVEVPAKVISPNVFA
NRNVNIPKNSLVTKSPLTFSNKIERPQKSTKINRFFPVSSKGKVDSLSPAGTCSPGILGT
TAPTKYDDQVTSGNGGNSTSLDASPGFPMDDWDDFDDFETPAKAKNDSFTSEKSGKSSKP
VSSPSEEKTEITRKVNHDAPALDKSFTNKIRLSESEQFCMETDELEHSVKKAVVSPGPSV
IQDPPEVELEDSPIKMTRRRAPAQNVKPVMSDSEEDDVRPEPFVERADDKIKWTDPKVLE
FDNSEADDDLGCIPPSPIEDEISRTTTPLRTRYNSADTEFSDSAVHSKGLITALHEPSEH
HSKDKTNEQLFIIMESICSLVDSIPEYELIGLSCGNELLLKRAQRKRILATGGEALLKMQ
QPDSTVISEPSLKEKSSSTGDMSSVMSSSSSVTVDSKKPLLIRRSSVISVESDHSDSVID
VNPLFSEDTGTVYVENESICDTKPSFNFSKKLSTDLNDSDLFFSPKKPETVQNRLKTPAA
ITASEDIELGDFYNDDFDIDDFNDSDIPDYFDEPPTSSALGQNSSTVTTTVKEGGPSKSS
WEKKPATPVSAPKPSKFCSPEPTYRNPAHDRFRGFNFPHSQEMMKIFHKRFGLHQFRFNQ
LEAINASVLGEDAFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVDQIQKLTTLDI
PATSLSGEKSDSEAGRIYLQLSRKDPIIKLLYVTPEKVSASTRLISALQNLYERGLLARF
VIDEAHCVSQWGHDFRPDYKRLHELRQKFPNVPMMALTATATPRVQKDILNQLNMTRPQV
FTMSFNRINLKYAVLPKKPKKVDEDCISWIKKHYPRDSGIVYCLSRNDCDAMAESLQRAG
ILALSYHAGLSDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEG
YYQESGRAGRDGDISHCILFYSYADAHRIKRIISMDREGDRHTKQTHYNNLHSMVHFCEN
MMECRRIQLLAYFGELKFNKSFCKDHPDVSCDNCAKPNQYKIRNVTEDVKKIVRFVQENC
EKVGARFGKTAQQNRLTLNMLVDIFLGSKSAKIQVGMFGIGGAYSRHNADRLFKKLVLDN
VLVEDLYITVNGQAVIYISAGPKAMNVLSGHMQVEFYETESASSIRKHKAAVAKNISKRE
EMVQECLKELTDLCKQLGKTFGIHYYNIFSTATLKKIAEKLSSDPEALLQIDGVTEDKLD
KYGAEVIQVLQKYSEWQLPADEQTNSGGDGWIDTTRGRTSVDFNDEDDTESSTYFRNQAP
QGQKRKKAPFFQYSKKRKGYGNTSASSKGRGYSSNKSWSSGTYRGGSKVAGPRGRSSAGN
GSTARTPGILAPPTPQTNQRPFLKPAFSHLS
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgttccacagaataacctggaagagcaactggcgaggcacagcagtgctgct
cagagcaagttgtctctggctaaacccaaaacggggggcttttctttcaagaagaagtcc
ccatcaggtacagccaaggtggaagtaccagccaaggtaatcagcccaaatgtcttcgca
aacaggaatgtaaatatccctaagaacagtttggtgactaaatctccgttgacattttca
aataagattgagagacctcaaaagtcaacaaaaatcaaccgcttcttccctgtaagttca
aaaggcaaggtggactcccttagcccagcaggtacctgctcacctggtattctggggact
acagctccaactaaatatgatgaccaggttactagtggaaatggaggcaattctacgagt
ctagatgcatctccaggattcccaatggacgactgggatgattttgatgactttgaaact
cctgccaaagctaaaaatgactcattcacttcagaaaaatcagggaagagtagcaagcca
gtgtcatctcctagtgaagaaaaaacagaaatcacaaggaaagtaaaccatgatgcccct
gctttagacaaaagttttacaaacaagattcgtctctctgaaagtgaacagttttgtatg
gaaacagatgaactggagcacagtgtcaaaaaagctgtagtttcaccaggacctagtgtg
attcaggacccaccagaggttgaattggaggattcccctattaaaatgaccagaagacgt
gctcctgctcaaaatgtgaagcctgtcatgagtgatagtgaagaagatgatgtcaggcct
gagccgtttgtagaaagggcagatgataagataaaatggactgacccaaaggtattggag
tttgataattcagaggctgacgatgacctaggttgcattcccccttcaccgatcgaagat
gagatctctcgtactactactccattgcggacaagatataattcagctgatactgaattc
agtgacagtgcagtgcactcaaaaggactcatcacagcactacatgaaccttctgaacac
cactcaaaagacaaaacaaatgagcaacttttcatcataatggagtccatttgttctttg
gttgattccatccccgagtacgaacttataggtctatcatgtggaaatgagcttttatta
aagagggctcaaaggaagaggattcttgcaacaggtggtgaagctttgttgaagatgcag
cagcctgacagcactgtgatatctgaacctagcttaaaagaaaaatcatcttctaccggt
gatatgtctagtgtcatgtcatccagcagctctgtgactgtggactccaagaaacctctt
ctgatcaggagatcttcagtgatctctgtggaatctgatcactctgacagtgttattgat
gttaatcccttgttcagtgaagacaccgggacagtgtatgttgaaaatgagagtatctgt
gacacaaaaccatcttttaatttctctaagaagttgagcacagacctgaatgattcagat
ctcttcttttcacccaagaagccagagactgttcagaacagactgaaaactccagcagcc
atcacagcttctgaagacatagaactaggtgacttttacaatgacgactttgacatagat
gactttaatgactctgatatccctgattactttgatgaacccccaacttcatcagcattg
ggacaaaactccagcactgtgactacaacagtgaaagaagggggaccaagcaaatcttca
tgggagaagaaaccagcgacacccgtgtctgcaccaaaaccttcaaagttctgctcccct
gagcccacctatagaaacccagcccacgatcgtttccgaggattcaacttcccccactca
caggagatgatgaagatctttcacaagcgttttggtcttcatcagttcagatttaatcaa
ctcgaagcaattaatgcatcagttctgggggaagatgcctttgttttgatgcccacaggt
ggcggtaaaagtctatgttaccagctgcctgcctgcgtgtcaccaggagtcactgtggtc
atctccccactcaaatccctcattgtagaccagatccagaaactcactactctggatatt
ccagcaacaagtctgtctggtgagaaaagtgacagtgaagcagggaggatttatttgcag
ctctccaggaaagaccccatcattaaactgctctatgtcactcctgaaaaggtgagtgca
agtaccaggctgatttccgccctgcagaacctgtacgagcgagggcttttagcacggttt
gtcatagatgaggctcattgtgtcagtcagtggggtcatgatttccgtccagactacaag
aggttgcatgaactgcgtcagaaattccccaacgtgccaatgatggctctgacagcgacg
gccactccccgtgtccagaaagacatcctcaaccagctgaatatgactcggccgcaggtg
tttaccatgagtttcaaccgaataaacctgaagtatgctgtgctgcccaagaaacccaaa
aaggttgatgaggactgcatcagctggatcaaaaagcactacccacgtgactctggtatt
gtgtactgcctgtcccgtaatgactgcgatgccatggctgagagtctgcagagagccggg
attttagctctgtcatatcacgcaggcctgagtgacggtgacagagaatatgtgcagagc
aagtggatcaatcaagacggctgccaggtcatctgtgccacaatagcctttggcatgggc
attgataagcctgatgtgcgctatgtgattcatgccagtctgcccaaatcagtggagggt
tactaccaggagtcagggagagctggcagagatggagacatctctcactgcattctcttc
tactcctacgccgatgctcaccgcatcaagaggatcattagcatggacagagaaggtgat
agacacaccaagcagactcattacaacaacctacacagcatggtgcacttctgtgagaac
atgatggagtgcagaagaattcagctgctcgcctactttggggagctgaagttcaacaaa
agcttttgcaaggaccaccccgatgtcagctgtgacaactgtgccaaacccaaccaatac
aagataaggaacgttactgaagatgtgaagaagattgtgaggtttgtccaggagaactgc
gagaaagttggagcaaggtttggcaagactgctcagcaaaaccggctgacactaaacatg
ctggtggacatcttcctaggttccaaatctgccaagatacaggtgggaatgtttggcata
ggaggagcctactccaggcataatgctgaccgtctcttcaaaaagctggttctggacaac
gttctggttgaggacctctacatcacagtcaacggtcaagctgtgatatatatctctgct
gggccaaaagccatgaatgtgctgtctggacacatgcaggtggagttctatgagacagag
agtgcatctagcatccggaaacataaagctgctgtggccaaaaacatctccaagagagag
gagatggttcaggagtgtctgaaggagctgacagacctgtgcaagcagctggggaaaacg
tttggcattcactattacaacatattctccactgccaccttgaaaaagatagctgagaag
ctttcttctgaccctgaggccctcctgcaaattgatggggtaacagaggacaaactggac
aagtatggagctgaagtcatccaggtcctacaaaaatactctgaatggcagctgccagca
gatgaacagaccaacagtggtggagacgggtggatagacacaacacgaggacgtacaagc
gtagattttaatgacgaggacgacacggaatcctccacctacttccgtaatcaggcccca
caaggacagaagaggaagaaagctccattcttccagtattccaagaagagaaaaggatat
ggcaacacaagtgctagttctaaaggtcgaggctatagcagtaataagtcctggtcatcg
ggcacctacagaggtggatcaaaagtcgcaggtcctaggggcaggagctccgcaggaaat
ggatcgacagccaggacaccgggcatcttggctcccccgacccctcagaccaaccagcgg
cccttcttaaagccggccttttcacacttaagctag
DBGET
integrated database retrieval system
