Monopterus albus (swamp eel): 109966483
Help
Entry
109966483 CDS
T05607
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
malb03036
]
109966483 (chd5)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109966483 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
109966483
NCBI-ProteinID:
XP_020467396
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNTVPLTALTRFFSDDDSLEQQKKKKPKKMK
EGKIPKVKKRKKEGGIQARVDSDLEETSEVEEEPERPEIVSESESSMYSPTKKKKKKPKE
KKEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAVETVTVTQP
TSVCSSQLGSQLGPIKKAKTKEGKGQGVRKKSKTVKEVKKKPKLKKTKSKSGQSGKKKKA
SSSEEDFLEESDFDDISIHSASVLSDTSGATTKKKARRGRKKRKKEDGDGYETDHQDYCE
VCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEDEEEAA
GEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGK
VQKILHWTWGEPPLPAELPAGPDGKPNDPLTNPPLKGHPEREFFVKWAGLSYWHCSWVSE
LQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPQYAVMEERFYRYGIK
PEWMVIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDIPEYDSHKASYWDHREQI
LGEDQRPLVVRKGKKLKEDHPRREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGL
NWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREF
EMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYEL
ITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFH
LLNFLTPDRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIV
RVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPV
LPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYE
RIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHNDI
QAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQE
LDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQN
MNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLG
KGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKS
EKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSER
EFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNG
KLSSPDLIPIGMELKKLTESVSSDPNTPVPASPVATQPGTPVPPEKTECLSGMAEDKETT
EQENKKLSEQETLGAEPASAPEKVADNEESKASSEEKTGDERDRTESPPTKTEPSANPKE
SALKQTELSSSQTSPKMEPYKEMEKSSEKGDNGSPLTKTEDKENKPAVTDDVKSEDTLEG
RLNGDKDTLDEMDESRKEDRNGFKTKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIW
HRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLL
EQALVIEEQLRRAAYLNMTQDPSHPAMALNARFTEVECLAESHQHLSKESLAGNKPANAV
LHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGNEPPQQQPF
SQGGFGCSQMYGSSFGGGFRGPGGQPMVNYSQMPLGPYVSVSTNGPPPPTSHLDKKSLDS
LRDVATPDLKSGKPSDVICIED
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagacgaggatgatgaaggtgagcgcaacactgttcccctcacagccctcacccgc
ttcttctctgatgatgactccctcgaacaacaaaagaagaaaaagcccaaaaagatgaaa
gaagggaaaatacccaaagttaagaagaggaaaaaggaggggggaatccaggcaagagtt
gacagcgacctggaggagacctcagaggtggaggaggagccggaacgtcctgaaatagtt
tcagagagcgagagcagcatgtatagccccaccaagaagaagaagaagaagcccaaggag
aaaaaggagaaaaagcccaggaagaagaagagagatgaggaagacgatgatgacgacgac
gatgatgggaacatgaaagagcccaaatcatccagccagctgatgcaggagtggggtctc
gaagatgttcagtatggcttcaccgaggacgactataaaaccatcaccaactacaaggct
ttcagccagttcctcaggcccctcattgcgaagaagaacccgaagattcccatgtcaaag
atgatgacagtgttaggggccaagtggcgtgagttcagtgccaacaacccgttcaaaggc
gcatctgccaccgctgtggccgccgctgtggctgtggaaacagttaccgtgacacagcca
acgtctgtctgcagcagccagctgggctctcagctggggccaatcaaaaaagccaaaacc
aaagagggaaagggacaaggcgttagaaagaagagcaagactgtgaaggaggtgaaaaag
aagccgaagctgaagaagaccaaatcaaagtccggacaaagtgggaagaagaagaaagca
tcctcgagtgaggaggacttcctggaggagtcagactttgatgacatcagcatccacagt
gcctctgtgctttctgatacctcaggggccaccaccaagaagaaagctcgacgtgggcgg
aagaaaaggaaaaaagaggatggtgatggctatgagacagaccaccaggactactgtgag
gtttgccaacagggtggcgagatcatcctgtgtgacacctgtccccgggcctaccacctg
gtctgtctggaccctgagctggagaaagcccccgagggcaaatggagctgtccacactgt
gagaaggagggaatccagtgggaggccaaagatgaggaggaggatgaggaggaggctgca
ggtgaggaagaggatgaccacatggagttttgcagagtgtgtaaagatggaggagagctg
ctatgttgtgacacatgtccatcttcctaccacatccactgcctcaacccgcccctcccc
gagatacccaacggggagtggttgtgtcctcgttgcatgtgccctccactgaaaggtaaa
gtacaaaagattctgcactggacatggggagagcccccgttgccagctgaactgcccgca
ggccctgacggcaaaccaaatgatccgctaaccaaccctccactcaagggccacccagag
agggagttctttgtgaagtgggctggcctttcatactggcactgctcctgggtcagcgaa
ctgcagttggagctatatcacacggtcatgtatcggaactaccagcgtaagaacgacatg
gacgagcctccgccgtacgactacggctctggagaggaggagctcaacaatgagaagagg
aagagcaaagacccccagtatgctgtgatggaggagcgcttctaccgctatggcattaaa
ccagagtggatggttatccaccggatactcaaccacagttttgataaggatggcgatgtg
cattacctaatcaagtggagagacctgccctatgaccagtgcacctgggaggtggatgat
tttgacatcccagaatatgacagtcataaagcttcttactgggaccacagggagcaaatt
ttaggggaagaccaacgccccctggtggtgcggaaaggaaagaaactcaaagaggaccat
ccaaggagggaggtccctcctgatgctcccatcatagatccaaccatcaagtttgagcac
cagccatggtacattaatgccactggaggaacactgcacccataccagctggagggcctg
aactggttgaggttctcctgggctcagggcacagatacaattctggctgatgagatgggc
cttggaaagacggtgcagacaatagtgtttctctactcgctttataaggagggtcactct
aaagggcctttcttggtgagtgcacctctctccactatcatcaactgggaaagggaattt
gagatgtgggctccagatttctacgtggtgacgtacactggggacaaagacagcagggcg
atcatcagagagaatgagttcacctttgaagacagtgcagtgaaatcaggacgcaaagtg
tttcgcatgaagaaagacactcctatcaagttccatgtgctgctgacctcttatgagctg
atcactatagatcaagccattctgggatccatcacctgggcctgtctggtggtggatgag
gcccatagactgaagaacaaccaatcaaagtttttcagaattctcaacgggtataagatc
tattacaagctgctactgactgggactcctcttcagaacaacctggaggagttgttccat
ctgcttaacttcctcaccccagatcgcttcaataacctggaaggcttcttggaagagttt
gctgatatttctaaagaggaccagatcaagaagctccacgacctgcttggccctcacatg
ctcaggagactgaaagctgatgtcttcaagaacatgcctgcaaagacggagctgattgtc
agagtggagctcagccccatgcagaagaaatattacaagtttattttgacgcggaatttt
gaggcgctgaactccaaaggtggagggaaccaagtgtcgctgctaaacattatgatggat
ctgaagaagtgctgcaaccacccctacctgttccccgtggctgccgtggaagcgcctgta
ttacccaacggttcttatgacggtaacctcctggttaagtcctcaggaaaactgactctg
cttcagaaaatgctgaagaaactcaaagatgaagggcacagagttctcattttctctcag
atgacaaagatgctggatctccttgaggattttctggagtttgagggttataaatatgaa
cgtattgacggaggaattactggaggcctaaggcaggaggccattgatcgtttcaatgca
ccaggcgctcagcagttctgcttcttgctttcaacacgagctggaggtctaggcatcaac
cttgctagtgcagacactgtcatcatctacgactcggactggaatcctcacaatgacatc
caagcctttagcagagctcaccgtataggccaaaacaaaaaggtgatgatctatcgtttt
gtgacacgaggctcagtggaggagcgaatcactcaggtggcgaagaggaagatgatgctg
acccacctggtggtgcgacctggcctgggctcaaaaactggctccatgtccaaacaagaa
ctggacgacatcctcaagtttggcacagaggagcttttcaaagatgaaatggaggcagca
cgaaccatgggtgacaataaagatggagaggagggcaacgtgattcactatgatgatgat
gccatctcaaagctgctggaccgcagccaggacgccactgaagacacagagattcagaac
atgaacgagtacctaagctccttcaaggtggctcagtatgtggtgaaagaagaagatgga
gaggaggaggtggagcgggagatcatcaagcaggaggagaacgtggatccggactactgg
gagaaactcctccgccaccactacgaacagcagcaggaggatttggctcgcaacctggga
aaaggcaaacgcatccggaaacaggtcaactacaacgatacgacccaggaggaccaagaa
tggcaggatgatctttcagacaatcagtcggagtattctgtggggtccgaggacgaggac
gaagatttcgaggagaggcctgaaggcgggcgcagacaatctcgtcggcagctgaagagt
gagaaagacaaacctctgccacccttactggcacgagttgggggcagtattgaggtcctg
gggttcaacgctcgccagaggaaagccttcctcaatgcaatcatgcgttggggcatgcct
cctcaggatgctttcaactcccattggctggttagggacctgagagggaagagtgagcgc
gagttcagggcctatgtgtctttgttcatgagacatctttgtgagcctggggcagatgga
gcagagaccttcgctgacggagtcccacgtgaggggctgtctcgtcagcatgttctcacc
aggattggagtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcatgtaaatggg
aagctgagctccccagatctgattcccattggaatggagctgaagaaactgaccgagagt
gtgtcctctgatcccaacacccctgtgccagccagccctgtcgcgacgcagcctggcacc
ccggtcccaccagagaagacagagtgtctctcgggtatggctgaggacaaggagaccaca
gaacaagagaacaagaaactgtcagagcaagaaaccttgggtgcagagccagcatctgca
cctgagaaggtggctgacaatgaagagagcaaggccagctcagaggagaaaacaggagat
gagagggatagaaccgagtcgccccccacaaagacggagccatctgccaatcctaaagag
tccgctttgaaacagacagagctgtcatccagtcaaacctcaccgaaaatggagccctat
aaagaaatggagaagtcgtcagaaaaaggagataacggttctcctctgacaaaaactgaa
gacaaggaaaataagccagctgttactgatgatgtaaagagtgaagatacattagagggt
cgattaaatggagacaaagacactttggatgagatggatgagagcagaaaggaggacaga
aacggcttcaagaccaagttcatgtttaatatcgctgatggaggttttacagagttgcac
accctgtggcaaactgaagagcgagcggcgctgtcttctggaaagatgcatgacatctgg
catcgtcgccatgactactggctgttggctggcatcgtaacacatggttatgctcgctgg
caggacattcagaatgacccacgttatgctattctgaatgagcccttcaagactgagatg
cataagggcaactacctagagatgaagaacaagttcctcgctcggcgttttaagttgttg
gagcaagctctggttattgaggagcagctgaggcgggcagcttacctgaatatgacccag
gaccccagtcacccggccatggctctcaacgctcgtttcactgaggtggaatgtctggca
gagtcccaccagcacctgtccaaagagtctctggctgggaacaagcctgccaatgctgtg
ctgcacaaagtgctgaaccagctggaggaacttctgagtgacatgaaagcagatgtgaca
cgactgcccaacatgctgtctaggatcccgccggtgtcggcccgcttgcagatgtctgag
cggagcatcctgagccgactcaccagccgaggcaacgaacctccgcagcagcagcctttt
agccagggcgggtttggttgttcccagatgtatggcagcagctttggtgggggattcaga
ggacccggcggacagcccatggtcaactatagtcagatgcctctgggaccctacgtcagc
gtgtctactaatggccccccaccccctacaagccatctggacaagaagtcacttgactcc
ttgagagacgtggctacgcctgacctcaagtcaggcaaacctagtgatgtcatctgtatt
gaggactag
DBGET
integrated database retrieval system
