Monopterus albus (swamp eel): 109967533
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Entry
109967533 CDS
T05607
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03013
Nucleocytoplasmic transport
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109967533 (casc3)
03015 mRNA surveillance pathway
109967533 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109967533 (casc3)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109967533 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
109967533
NCBI-ProteinID:
XP_020468831
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MADRRRRRRLRDSEDDDESGSGSGSDSGRSGSPVNKTWERHPDPAEATVVRTEAKKDTES
ECESEDGVGEAVLSDYDSADQEENGSHSEGVEEEEEAEQYSDEEAPAVASEPKPSAADGP
PQGEEQGGDEEEDVAAAEGQGEVCSKEENKAEQKGNLAGERQSGDGQESTDDPETKAGGK
PGQQLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFRED
EQAPKSREELIAIYGYDIRNGGGHGDRPYRQRRPRQNGSPSRDKWWKEGGERPVRSWQSG
GGLNRGGAPPPSSIHPSSISPSSHPVSSAQRSSNPSRPPLSRSRPSHQNNGPPQSHYRNN
ESNVPQMYPRERQGPKAQSDHAGDRSVGSRGGRRGRGGPSVVIEDTTVSQGGAGEQDSSL
SVVTTAASSQPGGYQSASPRRQQQEQRGSTDRSVSGLAASPSTSDPSLQSSATVTNREPS
PPTERPVERKSYSLARRTRSRAVDLGSKQPSVEESATGGNATSTGGMGGNGWTGGTDGPS
QAGEGGGGGGLAELDQDMARISLGGQTWSPSPTSYIHSEMRGLPNTMHIPGGPPQFSSME
EMGVGSSRAKRYSSQRQRAVPEPTAPMHLGVMEGHYYEPMSYQGPIYAHGDAPTTIPPQG
MLVQPEMHIPHPGLHPHQSGGPIANPALYGGPPVSLSPGQPQQLLPPPFYPPPGVVTFPY
PAIYPNPQGQSQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEMPLTSE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggctccgggacagcgaagacgacgacgaatcaggt
tctggttcgggttcggacagcgggaggtcgggatccccggtgaataagacctgggagaga
caccctgacccggcggaggccacagtggtccggactgaagcaaagaaggacacggagtcc
gagtgtgagagtgaagatggggtaggagaagctgtcctgtctgattacgacagtgcagat
caagaggaaaacggctctcattcagagggagtggaagaagaagaggaggcagagcagtac
agtgatgaagaagctccagcagtagccagcgagcccaaaccctcagctgccgatggtccg
ccgcagggagaggagcaggggggtgatgaagaggaggatgtggcagcagcagaggggcag
ggagaagtgtgcagtaaagaggagaacaaggctgagcaaaaaggaaatctagccggagag
agacagagtggtgatggacaggagtccacagatgatcctgagacgaaggctggaggaaag
cctggccagcagcttgatgatgatgaggacaggaagaacccggcctacatccccaggaag
ggtctgttcttcgaacacgatgtcagagggcatgctcaggaggaggagagacctaaaggt
cgaaacaggaagttgtggaaagacgagggtcgctgggagcatgacaagttcagggaggat
gagcaggcgccaaagagccgtgaagagctcattgccatctacggatatgacatccgaaac
ggtggtggccatggagaccggccgtacaggcagcgcaggcccagacagaatggttctccc
agcagagacaaatggtggaaggagggaggagagcggccagtcagatcctggcaaagtgga
ggaggtctgaatagaggaggagctcctccaccttcatccatccacccatcctctatatcc
ccctcctctcaccctgtctcctctgcccagcgcagcagcaacccctccaggccgcctctt
tcccgcagcagaccatcccaccagaataatggcccacctcaatcccattacaggaataat
gaatcaaatgtaccccagatgtatcctagagaacgacagggccctaaagctcagtcggat
cacgcaggagacaggagtgtgggtagcaggggagggcgtaggggaagagggggcccctct
gtggtcattgaggacactacagtcagccaaggaggtgctggggaacaggactcaagctta
agtgttgtaacgacagcggcatcatctcagccgggtggttaccagtctgcatcaccgagg
cgacagcagcaggaacagcgggggagtactgacagatcagtgtctggattagctgcttct
ccctccacctctgacccctctcttcagtcatcagcaactgtgaccaatcgggaaccctct
cctcccacagagcggccggtggagcgtaaatcttattcactggctcgtaggactcgttct
cgggccgtagacttgggtagcaaacagccgtctgtggaggagtctgccactggagggaat
gccacctccactggtggcatgggagggaacggctggacaggaggaacagatgggccgagc
caggcaggagaaggaggaggaggtggagggctggctgagctggaccaggacatggcacga
atcagtctaggaggacagacctggagcccaagcccgacatcatacatccactctgagatg
agaggtctacccaacaccatgcacatccctggcggaccccctcagttctctagcatggag
gaaatgggtgttggctccagtcgggccaaacgctactcctcccagcgtcagagagctgtc
cctgagccaacagcgcccatgcacctgggagtgatggagggacactactatgaacccatg
tcgtaccagggaccaatctatgcccacggggatgcccccaccacaatcccaccacaaggc
atgctggtccagcctgagatgcacatcccccaccctggtctccatccccaccaatcaggt
ggtccaatcgctaaccccgccctctatggaggcccacctgtatctctgtcaccggggcaa
ccacagcaactgctgccacctcctttctaccctccgccaggcgtcgtgaccttcccctac
cctgccatatacccaaacccacagggtcagtcccaggtgacctacggaggcgtgacgtac
tacgacacgatgcagcagcaggctcagcccaagccttcaccgccccgccgcacgtctcag
cctgtcaccgtcaagcccccccctccagaaatgcccctcacctcagagtga
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