KEGG   Monopterus albus (swamp eel): 109967553
Entry
109967553         CDS       T05607                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109967553 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:malb03019]
    109967553 (thoc6)
   03041 Spliceosome [BR:malb03041]
    109967553 (thoc6)
Messenger RNA biogenesis [BR:malb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109967553 (thoc6)
Spliceosome [BR:malb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109967553 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40 WD40_Prp19 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_SCAP NBCH_WD40 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_HPS5 WDR54 Beta-prop_IP5PC_F Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_like Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 109967553
NCBI-ProteinID: XP_020468865
UniProt: A0A3Q3K3U9
LinkDB
Position
Unknown
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIALFSLSAALSPEATGLNQKPVLTFTAHE
GPVFSLLSTDCHLLSAGNGEVSAWSWAELTKKNAKPLWTKRPNYKSSLEIPEINSMAVNP
SDNSLVIGGGDNNVHILDLEHGAFKLVLQGHSDYIHCVSVREREAEILSGGEDGAVRIWD
SRTGQSVHCIEVYKYKTCARPQYGKWISCVTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LTGCQRQATFYQDMILAVGEGSFVSHCLLGGEVKAQIPCMPQSLNTLQLNTNSTEHRVLT
AGGSSSHIDVFTNLSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtcccgtagagctcctccacatgtcagttttctctcagagtttttccccctgtggt
cggttcctggcagctggaaacaactatggagaaattgcactttttagcctatctgcagct
ctgagtccagaggcaacaggactaaatcagaaacctgttctaaccttcactgctcacgaa
ggtccggttttctctctcctctccactgactgtcacctcctgagtgcaggaaatggagag
gtcagcgcctggagctgggccgagctcaccaagaagaatgcgaaacctttgtggacaaaa
agacccaactacaaatccagtctggagatcccagagatcaactcgatggcagtcaacccc
agcgataacagccttgtgatcggtggaggagacaacaatgtccacatcctggatctggaa
catggggctttcaagttggtcctccagggtcattcggactacatccactgtgtgagtgtg
agagagagggaggcagagatcctgtcgggaggggaggacggagctgtgaggatttgggac
agcaggacaggtcagtctgttcactgcatcgaggtctacaagtataagacctgtgcacgg
cctcagtatggtaaatggattagctgtgtgaccacagattctgactggatgctgtgtggt
ggaggtccttctctatctctgtggcatctccgctctctgtcgccgacttcgatcttccct
ctgacaggctgccagagacaggccaccttctaccaggacatgattctggctgtaggtgaa
ggatcatttgtgtctcactgtctgctggggggagaggtcaaagctcagatcccctgtatg
ccccagagtctcaacaccttgcagctcaacaccaacagcactgagcaccgggtgctgaca
gcaggaggtagcagtagccacattgacgtgttcaccaacctgtcgtatagagccttttcc
ctcagcttctga

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