KEGG   Monopterus albus (swamp eel): 109967553
Entry
109967553         CDS       T05607                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03013  Nucleocytoplasmic transport
malb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109967553 (thoc6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    109967553 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:malb03019]
    109967553 (thoc6)
   03041 Spliceosome [BR:malb03041]
    109967553 (thoc6)
Messenger RNA biogenesis [BR:malb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109967553 (thoc6)
Spliceosome [BR:malb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109967553 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_NOL10_N Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_SCAP WD40_Gbeta NBCH_WD40 CFAP251_N Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd TRM82_WD Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_HPS5 DSE1_N WDR54 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_WDR41 Tricorn_2nd Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_like Beta-prop_Vps41
Other DBs
NCBI-GeneID: 109967553
NCBI-ProteinID: XP_020468865
UniProt: A0A3Q3K3U9
LinkDB
Position
Unknown
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIALFSLSAALSPEATGLNQKPVLTFTAHE
GPVFSLLSTDCHLLSAGNGEVSAWSWAELTKKNAKPLWTKRPNYKSSLEIPEINSMAVNP
SDNSLVIGGGDNNVHILDLEHGAFKLVLQGHSDYIHCVSVREREAEILSGGEDGAVRIWD
SRTGQSVHCIEVYKYKTCARPQYGKWISCVTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LTGCQRQATFYQDMILAVGEGSFVSHCLLGGEVKAQIPCMPQSLNTLQLNTNSTEHRVLT
AGGSSSHIDVFTNLSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtcccgtagagctcctccacatgtcagttttctctcagagtttttccccctgtggt
cggttcctggcagctggaaacaactatggagaaattgcactttttagcctatctgcagct
ctgagtccagaggcaacaggactaaatcagaaacctgttctaaccttcactgctcacgaa
ggtccggttttctctctcctctccactgactgtcacctcctgagtgcaggaaatggagag
gtcagcgcctggagctgggccgagctcaccaagaagaatgcgaaacctttgtggacaaaa
agacccaactacaaatccagtctggagatcccagagatcaactcgatggcagtcaacccc
agcgataacagccttgtgatcggtggaggagacaacaatgtccacatcctggatctggaa
catggggctttcaagttggtcctccagggtcattcggactacatccactgtgtgagtgtg
agagagagggaggcagagatcctgtcgggaggggaggacggagctgtgaggatttgggac
agcaggacaggtcagtctgttcactgcatcgaggtctacaagtataagacctgtgcacgg
cctcagtatggtaaatggattagctgtgtgaccacagattctgactggatgctgtgtggt
ggaggtccttctctatctctgtggcatctccgctctctgtcgccgacttcgatcttccct
ctgacaggctgccagagacaggccaccttctaccaggacatgattctggctgtaggtgaa
ggatcatttgtgtctcactgtctgctggggggagaggtcaaagctcagatcccctgtatg
ccccagagtctcaacaccttgcagctcaacaccaacagcactgagcaccgggtgctgaca
gcaggaggtagcagtagccacattgacgtgttcaccaacctgtcgtatagagccttttcc
ctcagcttctga

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