Monopterus albus (swamp eel): 109967603
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Entry
109967603 CDS
T05607
Symbol
upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03013
Nucleocytoplasmic transport
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109967603 (upf2)
03015 mRNA surveillance pathway
109967603 (upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109967603 (upf2)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109967603 (upf2)
mRNA cycle factors
P-body specific factors
109967603 (upf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
109967603
NCBI-ProteinID:
XP_020468969
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MTDVSSATVSSMPAESKRSVNMDEKDVCSFNNKEKEKDRDSERRPVSARDKAKDEAKMSG
KKDNVKEEKRKRLEEEKKKKEEKDRRKKEEEKQKAEEEQKKKEEEEKRQQEEQERKLQEE
EAKRQREEEAALLKETEEAHQLHQEAWERHQCRKELRSKNQNAQEGRPEEAFFSRLDSSL
KKNTAFVKKLRTLTEQQRDSLSNDFASLNLSKYIGEAVSSVVEAKLKISDVGCAVHLCSL
FHQRYAEFAPLLLQTWKKHFEARKEDKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIY
EQLKNIIGTDRETHTHVSVVISFCKHCGDDIAGLVPRKVKLAAERFGLAFPPSEIISTEK
QQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQK
LLANTQSLADLLDENMPELPQDKTVQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFY
ENLVDLKAFVPAILFKDNEKSSQGKDKDDAKDGREGKDAASTTEELELELEALDITDEPL
ELEGPDEAENEELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRELIDKAAMD
FCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSMLKGDFRF
HIRKKDQINIETKNKTVRFIGELAKFKMFSKTDTLHCLKMLLSDFTHHHIEMACTLLETC
GRFLFRSPDSHLRTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPMEKTVKKRRPP
LQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKSYLICCMVNIWNVKYNSIHCVANL
LAGLVAYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIF
RTLFSFISFGVNQDGSPSPLDPPEHLFRIRLVCTLLDTCGQYFDRGSSKKKLDCFLIYFQ
RYIWWKKSVDVWTKDHPFPIDIDYMISDTLELLRPKMRLSCSLEEATKQVTDLEREVLVK
LGLAAEKDGRSSAMSEGEVLDEEDDDGDDEEEGGAETEEQSGNESEMNEQEEDEGSENEE
EEREEEEEENTDYLTDSNKENETDEENNEVTIRGGGLKHVACAEDEEFIQALDKMVLENL
QQRSGEAVKVHQLDVAIPLQLKSHLKKGGAGQPCMGEGDTDISDTMQFVMLTRKGNKQQY
KILNVPLSSHLAANHFNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPAPAN
TNRERRPRYQHPKGAPNADLIFKTGGREKRTSIERRDRQERTDKQERNQNSVAE
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtaagttctgctactgttagcagtatgcctgctgaaagcaagcgctcagta
aacatggatgagaaagacgtttgttccttcaataacaaggaaaaagagaaggatagagat
agtgagagaagaccagtatctgctcgagacaaggctaaagatgaagccaaaatgagtggt
aaaaaagacaatgtcaaggaggagaagagaaagcgcctagaggaggaaaagaaaaagaaa
gaggaaaaggacagaaggaagaaagaggaggaaaaacagaaagcggaggaggagcagaag
aagaaagaggaggaggagaagagacagcaggaggagcaggagcggaagctacaagaggag
gaggccaaaagacaacgtgaggaggaagcagctctgctgaaagaaacggaggaggcgcat
cagctgcaccaggaggcctgggagcgccatcagtgcaggaaagaacttcgcagcaagaac
cagaatgcccaagagggtcggcctgaagaggccttcttcagccgactggattccagcctt
aaaaagaacactgcctttgtcaagaagctacgtacacttactgaacagcagcgagactcg
ctttctaatgactttgcttcattgaacctcagcaagtacattggcgaggctgtgagctct
gttgtggaggccaaactgaagatctctgacgtaggctgtgctgtccatctctgctccctc
ttccaccagcgctatgctgagttcgctcctttgctgttacaaacatggaagaaacacttt
gaagcaaggaaggaagacaaagcgcccaatgtgagcaagctgcgcacagacctgcgcttt
attgctgagctcaccatcgttggcctcttcacagataaagagggtctttcgctgatttat
gagcagctgaagaacattattgggaccgaccgggagacacacactcatgtgtcggtggta
atcagcttctgtaagcactgtggggacgacattgctggtctggttccccgcaaggtgaaa
ctggcagctgagagatttggtttggccttccctccaagcgagataatcagcacagagaaa
cagcagcccttccagaaccttctacgagagtacttcacatcactcaccaaacacctgaag
aaggaccaccgggagctgcagaacattgagaggcagaacaggcgtatcctacattccaaa
ggggagctgagtgaggacaggcacaagcaatatgaagagtttgccacttcctaccagaag
ctgctggccaacactcagtccctggctgatctgcttgatgaaaacatgccagagctacct
caggacaagactgtgcaggaggaacatggccctggcattgacattttcacccccggtaag
cctggagagtatgacctggagggggggatctgggaagatgaagatgctcgtaacttctat
gagaaccttgtggatctgaaggcctttgtccccgccatcctcttcaaggacaacgagaag
agtagccagggcaaagacaaggatgatgccaaagatggcagagaggggaaggatgcagcc
agcaccacagaggagctggagctggagctggaggctctggacatcacagatgaacctctt
gaactggagggaccagacgaggcagaaaacgaagaactggccaaaaaactgctggatgag
caagaacaagaggatgaggaggccagcacagggtcccacttgaagctaattgtggatgcc
ttcatccagcagctccccaactgtgtcaacagggaactcatcgataaggctgccatggac
ttctgtatgaacatgaacaccaaatctaacaggaggaagcttgtgcgagccctcttcacc
gtccccaggcagaggttggatcttctgcccttctactcccgcttggtggcaactctgcat
ccctgcatgtcagatgtggctgaggacctctgctccatgctgaagggagacttcaggttc
catattcggaagaaggaccagatcaacattgagacaaaaaataaaacagtcagatttatt
ggggaactggccaagttcaagatgttctccaaaacagacacacttcattgtcttaagatg
ctgctgtctgatttcacccatcaccacattgagatggcctgcacactgctagagacctgc
ggccgcttcctcttcagatcccctgactctcaccttcgtaccagcgtcctgctggagcaa
atgatgcgtaaaaagcaggcacagcatctggatgcccgctatgtgaccatggtggaaaac
gcctactactactgtaaccctccacccatggagaagacggtgaagaagaggaggccaccg
ctgcaggagtacatccgcaagctgctctacaaggacctgtccaaggtcaccacagagaag
gttctgaggcagatgcgcaagctgccctggcaggaccctgaggtcaagagctatctgatc
tgctgcatggtcaacatctggaacgtcaagtacaacagcatccactgtgtggccaacctg
ctggctggcctagtggcctaccaggaagacgtgggcatccatgttgtggatggagtgctg
gaggacattcggctgggcatggaggtcaaccagccaaagtttaaccagcggcggatcagc
agcgcaaagttcctgggtgagctctacaactaccgcatggtggagtcagccgtcattttc
cgcaccctcttctccttcatctcctttggggtcaaccaggatggcagccccagccccttg
gatcctccagagcacctgttccgcatccgcctggtctgcaccttgctcgatacctgtggc
cagtactttgacagaggctccagcaagaagaagctggactgtttcctcatatacttccag
cgttacatctggtggaaaaagagcgtggatgtttggaccaaggaccaccccttccccatc
gacattgactacatgatcagcgacaccctggagctgctcagacccaagatgaggctcagc
tgctccctggaggaggccaccaagcaggtcaccgacctggagagggaagtgctcgtcaaa
ctaggactggccgcggagaaggacggccgctccagtgccatgagtgaaggggaggttctc
gatgaggaagacgatgatggcgatgatgaggaagagggaggagctgagactgaggagcag
tcgggcaatgaaagcgaaatgaacgagcaggaagaggatgaagggtctgagaatgaagag
gaggagagggaggaagaggaagaggagaacacagactacctgacagactccaataaagaa
aatgagactgatgaggagaacaatgaggtaaccatccgtggcggtggtctgaagcatgta
gcctgcgccgaggacgaggagttcattcaggctctggataagatggtgctggagaacctg
cagcagcgtagcggcgaggcggtgaaggtgcaccagctggatgtagccattcccctgcag
ctgaagagtcacctgaagaagggaggcgccggacagccgtgcatgggagagggggacact
gacatctccgacaccatgcagtttgtcatgctgacacgcaagggcaacaagcagcagtat
aagatcctgaacgtgcccctgtcttcccacctggcggcgaaccacttcaaccagcagcag
gctgaacaggaggagcgcatgaggatgaagaaactcaccctggacatcaatgagagacag
gagcaggaggactaccaggagatgatgcagtctctcgcccagcgtccagctccggccaac
accaaccgagagcgtcggcctcgctaccagcacccgaagggtgctcccaatgccgacctc
atcttcaaaactggaggaagagagaaaagaacaagcattgagaggcgagacagacaagag
aggacagacaagcaggagagaaaccagaacagtgtggcagagtag
DBGET
integrated database retrieval system
