Monopterus albus (swamp eel): 109968667
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Entry
109968667 CDS
T05607
Symbol
whrn
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
malb03037
]
109968667 (whrn)
Cilium and associated proteins [BR:
malb03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109968667 (whrn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
109968667
NCBI-ProteinID:
XP_020470758
UniProt:
A0A3Q3R6W0
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MSSTDLERMSLSSSANSVASSARTLSANVRKLHNALNLLLCDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDLVASNGNAEPP
PGDFSRASPVPSGHFSPNNPPDFHVALRGSPDSFSTSSDGTAPLVPLLGRNFIHEPPGEL
RQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDK
VTHAEAVKVLKGSKKLCLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPDHRSATL
RRTDSQRRSNMQLLQEGDEKKVNLVLDDGHSLGLMIRGGEEYALGIYITGVDQGSAAECG
GIKVGDQILEVNGRSFLSIPHDEAVRVLKSSQHLMMTVKDVGRLPHSRTVVGETKWIASS
QIAESSANSSLASFSVDQGASAAGKPGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTE
AERQTMAYYVEEYRDGHIGVEQLVMALFELLNTHAKFSLLSEVRGLVTPQDLERFDGMVL
RREIQALKARQGMAGATALQPDSLSMVSYPDTLTSSSASFMSNTTLSSARERLLWLIDMM
ENDSVVESNEVDPPESLNTLLTDISLDDIQSTTADSPPSFKPPPPPGVQQHPSRRDQLNK
CPSSESSHSGLYFTAPTPHNHSKESKHAPASPSLHHKREHPRDLSQDYTPVRKRGPPIPS
KKEQIAAAQLSTVTQHNIGPFPRVQSPSRGTKPAAPSLPPSLPDPPLPFKPVSMSKATPV
SSSGSKHQFVTVEVHRPNAEPDVNEVRPLPQGRGGTLSQLSDSGQTPSEDSGVDIAESGH
ISRDSSTRLPRDTHEGGVDNPSKPPGLLEPTSTLVRVAKSASTLGIAIEGGANTRQPLPR
IVTVQRGGSAHNCGQLKVGQVILEVNGVSLRGREHRDAARLIAEAFKTKERDYVDFLVTE
FNVAL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacctggagcgcatgtctctcagctcctccgccaactcggtggcctcc
agtgcgcggactctgtcggccaatgtgaggaaactgcacaacgcactcaatctcctgctc
tgcgacttcgagagagagcaattcatccactgtctcaatgtgtaccactccaagcgcaat
gtgtacgacttggtgcagactctcaatgtcatcctcaacgcgcccagcaagcggcaactt
ctacccatgctgcggctggtcatcccccgttctgaccagcttctctttgagcaatacacc
tcggagggcctctacttaaagtcggatttagttgcaagcaatggtaacgctgaaccccct
ccgggcgacttctccagggccagcccggttccctcggggcatttctcgccaaacaacccg
cccgactttcacgtggcattgcgaggctctccggacagcttcagcaccagcagcgacggg
acagctcctctggtaccgctgctgggtaggaactttatccacgagccgccgggcgagctg
cggcaggtcaccatgaagcggcacaagagcaacgagggcctgggcttcagcatccgcggt
gggtcggagcacggggtcggcatctacgtgtccctggtggaaccagggagcctggcggag
aaagagggtctccggatcggcgaccagatcatgaaagtcaacgacaaagtcttcgacaaa
gtcactcatgctgaagcggtgaaggtgctgaagggcagtaaaaagctttgtctgtcagtg
cgttcagttgggcgaattcccggcggctatgtcacgaaccatgtttatacctgggttgac
cctcagggtcgtagcgtgtcccctcctcctgacctgcctgaccatcggagcgctaccctg
agaagaactgacagccagcgacgcagcaacatgcagctactgcaggagggagatgagaag
aaggtcaacctggttttggatgacggccattccctgggtttgatgatccgaggtggagaa
gaatatgctttggggatttacatcactggagtggaccagggatcagcagcagagtgtgga
ggaatcaaggtcggggaccagatcttggaggtgaacggtcgcagcttcctgagcatcccg
catgacgaagctgtcagggtcctgaagtcgtcacagcacctgatgatgacggtgaaagat
gtggggcgcctgcctcactccaggacagtggtgggcgagaccaagtggatcgccagctcg
cagatcgcagagagctccgccaacagcagcctggcaagtttctcagtggaccaaggagcc
tctgcagcaggaaaacctgggttttacaagggtgtggcgggctcacaggtgacgctgtcc
agcctggtgaaccagtcccgggccatgctggaggagcaggcacgtcaccttctgacagag
gctgaacggcagacaatggcctactatgtggaagagtatcgggacggacacatcggtgtt
gagcagttggtcatggcattgttcgagctgctcaacacgcatgcaaagttctccttgttg
tcagaggtgcgaggcctggtcaccccccaggatctggagcgttttgacgggatggtgctg
cgacgtgaaattcaggctctaaaggcacggcaggggatggctggggccacggcactccaa
ccagactctctgtccatggtgtcgtaccctgacacactgacgtcatcttcagccagcttc
atgtccaacaccaccctcagctctgcacgggaaaggctgctctggctgatagatatgatg
gagaatgacagtgtggtggagagcaatgaagtggatcctccggagagtctgaacacgctg
ctgacggacatctctctggatgacatacagtccaccactgccgattctcccccctccttt
aagcctcctcccccaccaggggtgcagcagcacccaagtaggcgggaccagctcaacaaa
tgcccttcatctgaatcctcccactcaggcttgtacttcacagctccaaccccccacaac
cacagcaaagagtcaaaacacgcccccgcctcaccctcactacaccacaaacgagaacat
cccagggacctatctcaagactacacgcccgtcagaaagagaggtcctccaataccttca
aagaaagaacaaatagcagctgctcagttgtccacagtcacccagcacaacattggccct
ttccccagggtccagtccccgagcagaggcaccaaacctgctgccccatcacttccacct
tcactccctgatcctcctctgccctttaagccagtgtccatgtccaaagccaccccagtc
agctcttctggctctaaacaccaatttgtgacagtggaggttcacaggcccaacgcagag
cccgacgtcaatgaggtgcgaccgctgccccagggtcgaggtggcaccctgtctcagctg
tcagacagtggccagacccccagtgaggacagtggggtggacatagctgagtcaggacac
atcagcagagacagcagcacacgcctcccccgagacacccacgaaggtggggtggacaac
ccctccaaaccgccagggctgttggagcccacatctacactagtgagggtggcaaagagt
gccagtaccctgggtattgccattgaaggcggcgccaacacgcgccagccgctgccacga
attgtcacagttcagaggggtggttccgctcataactgcggtcaactgaaggttggtcag
gtgatcctggaggtaaacggggtttctctgagggggcgagagcacagggacgctgcacgc
ctcattgccgaggctttcaagaccaaagagagggattacgtggacttcctggtgaccgag
ttcaatgttgcactatag
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