Monopterus albus (swamp eel): 109969291
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Entry
109969291 CDS
T05607
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
malb03036
]
109969291 (hfm1)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109969291 (hfm1)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
109969291 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
109969291
NCBI-ProteinID:
XP_020471694
LinkDB
All DBs
Position
Unknown
AA seq
1535 aa
AA seq
DB search
MSDSSDCTLSLDNLFFEKPIIHKVKPLHQEASPWQLEVPPSFSQIPATQDMQEEAESFST
LYNFSQKPIKFLPPFKGSLISFINGEKKIEETQGGCNSISQCDGLWEGEEFRDYSHGTSQ
SGRGGDETPQVSGHVSMSRRYSSLDCSRSPPLRRSLFKAQVLNSGGDSTNTDDLSSSSKQ
TASRPQTFLSQVTMATAPLPLKPPRATVSQATPPIPQQPPLPPPPLGSSAASGQPPQQAP
HTEKQDKGTKRAFVPPMTPQPLRIQGSSGSELLRPVSEIPAKFRTVFSEFPFFNCVQSKA
LDDVLYTGKNFVACAPTGSGKTVLFELAIIRLLMETSEPWRDVKAVYMAPIKALCSQCFE
NWKKKFGPLGLSCKELTGDTEIDDFFEIQDSHIILTTPEKWDSMTRKWKDNCLLQLVRLF
LIDEVHVVKDATRGATLEVVVSRMKAVHAYRTAQNPKAGPSMRFVAVSATIPNISDISEW
LSNDSGPATCLEMDETHRPVKLRKVVLGFPCSSNQTEFKFDLSLNYKMANIIQTYSDQKP
ALVFCSTRKGAQQSAAVLAKDARFIMSIEHKQRLIKYANSILDSKLRDLVMLGVGYHHAG
VDLSDRKLIEEAFTLGDLPVLFTTRTLAMGVNLPAHLVVIKSTMQYVAGSCEEYGEADLL
QMIGRAGRPQFDTSATAVIMTKIQTKDKYMKLMNGMEIIESSLHSHLVEHLNAEIVLQTI
SNVNMALDWIRSTFLYIRALKNPKHYGFSADLDRYGIEAKLQELCLKNLNSLSSIGLIDM
DEDINIKPTEAGRLMARYCVAFDTMKQFSKVAGTENLSDLTELLSKSIEFSDIQLRMNEK
RSLNTLNKDKNRITIRFPIEGRVKTSEMKVNCLIQAQLGSISIQEFGLIQDTAKIFRNGM
RISRCLSEFLSQRSKTGFSALLNSLILAKCFRAKLWENSPYVSKQLEKIGQTLSTAMVNA
GLTTFSKIEQTNARELELILNRHPPFGNQIRESVIHLPKYDVTLEQLPRYSCATAEIMVK
VQLKNQAQLLSRRTAPDNHYISLIIGDSDNNVVFLQKLTDLVLLKCGSWSKKIEVAKPLK
GEVISVNLISSHYVGFDIQQKFNVYYSGARRFDTDNSYNTTYNPTGQRPWHSALKPQSTD
QASPQRENVPPATNHDLGSKRQCNHFCKNKERCGHDCCKVGVTVARKRSANQESSFSSYL
NDLRSRCDTLTQTPVKRLKIKMSEESVTVNMQEFAYKPKERLPTVSWCGANHYEASVRHQ
TETVDLTGEDCAQLSDIVHLDDFESDYNDYVEDKQRRVEEPVQTSAATPDQRQQSSSVWM
DPRFSQSPKQHLNENDTTNSAYSKRSTVASNQGAHCEIAPSSQIPTVSFDLGNDWDDWDD
FDDDEKLVHASDTSFATCIANAKPQIQQSLQCNTPGLAATAAPVLLGLSQVKPLMTTART
PLSPEIRNARLSLATVRTQNRITLDWNKKKPNILSEEITVKAPENLPTQTHVAPATTRFD
FFSVISGTSNGSSCVNTSNNSKEEEAFLGIFDGIF
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattccagtgactgtaccttatccttggacaatctgttttttgagaaacccatc
atccacaaagtaaagccattgcaccaggaggccagtccatggcagctggaagtgcctccg
tctttttcgcagattccagccactcaggatatgcaggaggaggcagagtctttctccact
ctatacaatttctcacagaaacccattaagttcctgcctccttttaaaggatcattgata
agttttatcaatggtgagaaaaagattgaggagactcagggtggctgcaatagcatcagc
caatgtgatggcctttgggaaggtgaagagttcagggattactctcatggtaccagtcag
agtggaagaggtggagatgaaactccacaggtctctggtcacgtgtccatgagcaggagg
tattcatctttggactgcagcagaagcccacctctacggagaagcctcttcaaggctcag
gtgttgaacagtggaggtgactcgacaaacacagatgaccttagcagcagcagcaaacag
acagcatctagaccccaaacttttctcagtcaggttaccatggcgacagcgcctcttcct
cttaagccgccacgggcaacagttagccaggcaactcctcctatcccccaacagcccccc
ttgccaccccctccactgggctcatctgcagcgagtggccaacccccgcagcaggcgcca
cacacagagaagcaggacaagggcacaaagagagccttcgttccacccatgacacctcag
cctctccgcatacaaggttcgtctgggtctgaactgttgcgacctgtttctgaaattcca
gccaagttcagaacggtcttcagtgagttcccctttttcaactgtgttcagtccaaagca
ttagatgatgttctttatacgggtaagaattttgtggcatgcgcacctactggatcaggt
aaaactgtgttgtttgagctggccatcattcgcctgctaatggagacctcagagccctgg
agagatgtcaaggcagtctatatggcccctatcaaagctctctgcagtcagtgctttgag
aactggaagaagaagtttggtcctctgggcctgagctgtaaggagctgactggcgacacg
gagatcgatgacttctttgagattcaggactcgcatattatcctgaccacaccggaaaaa
tgggacagcatgacaagaaaatggaaggataactgtctgctgcagctagttagacttttc
cttatcgatgaggtgcatgtggtgaaagatgcaacccgtggtgccactttggaagtggtg
gtgagcaggatgaaggcagtgcacgcctacaggacagcacagaatccaaaggcaggcccc
tctatgaggtttgtggctgtatccgccaccatacccaacatctctgatatttcagagtgg
ctgtctaatgacagtggtcctgccacatgtctggaaatggatgagactcaccgtccagta
aagctcaggaaggtagtgctgggattcccctgcagctcaaaccaaacagagtttaagttt
gacttgtcactcaactacaagatggccaacattatacagacttattctgaccagaagcct
gctctagtgttctgctctacaaggaaaggagcccagcaatcagctgcagttcttgccaag
gatgctaggttcatcatgagcatagaacacaagcaaaggttgataaaatatgctaattct
attctggattcaaaactgagagatctggtgatgttaggagttggttaccaccatgcagga
gttgacttgtctgataggaagttgatagaggaggccttcactctaggagacctgcctgtc
cttttcactactaggactttggccatgggggtgaatctgccagctcatttggtggtgatc
aagtccaccatgcagtatgtagcaggctcctgtgaagagtacggtgaggctgacctgctg
cagatgataggtcgagctggaagaccgcagtttgacacatcagcaactgcagtgatcatg
accaagatccaaaccaaagacaagtacatgaaacttatgaatgggatggaaatcattgag
agcagcttacacagccatctggtggaacacctgaatgctgagattgttctccaaaccatc
agcaatgtcaacatggctctggactggatacgctccaccttcctctacatcagagccctc
aaaaaccccaaacactatggtttctctgccgacttagacagatatggaatcgaagctaaa
ttgcaagaactgtgtctgaagaacctcaactctctgtcttccattggcctgatcgacatg
gatgaggacattaacatcaaaccaacagaggctggcaggttgatggcgaggtactgtgtc
gcttttgacaccatgaaacagttcagcaaagtcgctggcactgagaacctctctgatctg
actgagctgctgtcaaagagcatagagttcagcgacattcaattgagaatgaatgagaag
aggtccttgaacactttgaacaaggacaagaacaggatcaccatcaggtttcccatagaa
ggaagggtcaaaaccagtgagatgaaagtcaactgcttgattcaggctcagttggggtcc
atctctattcaagagtttggacttatacaagacacagcaaagatcttcaggaacggcatg
cgcatcagcaggtgtctgtcagagtttcttagtcagcgatccaagacaggtttctctgct
ctgctcaactccctgatcctggcaaagtgcttcagagcaaagctttgggagaactcaccc
tatgtttccaaacagctggagaagataggccagaccctgtcaactgccatggtgaacgct
ggactcaccactttcagcaaaatagaacaaaccaatgccagagagcttgagctgattctc
aacagacatccaccttttggaaaccaaatcagagaatctgtcattcacctcccgaagtat
gatgttactttggagcagcttccgaggtatagctgtgctactgcggagatcatggtaaag
gtgcagctaaaaaaccaagcccagctgctgtccaggagaacagctccagacaaccactac
atctctctgatcatcggagactctgacaacaatgtggtgttcttgcagaaactcacggac
ttggtgctgttgaaatgtggtagctggtcgaagaaaattgaggtggcaaagcccttgaag
ggagaggtgatcagtgtgaatctcatcagctcacactatgtgggctttgacatccagcag
aagttcaatgtgtactactctggggccaggaggtttgatactgataattcatacaacaca
acatataatcctactggacagagaccctggcactctgcattgaaaccacagtctacagat
caggcttcacctcagagagaaaatgtcccacctgctacaaaccatgatttaggcagtaaa
agacagtgcaaccatttctgcaagaacaaggaacgctgtggccacgactgctgtaaagta
ggtgtaactgtagcacggaagaggtcagcaaatcaagaatccagtttctcttcctatttg
aacgacctgaggagcaggtgtgacacactcacacagactcctgtcaaacgactcaagata
aaaatgagtgaggagtctgtgactgtcaacatgcaggagtttgcctacaaacccaaagag
aggctacctactgtttcctggtgtggggcaaatcattatgaagcttcagtgagacatcaa
actgaaactgtggatctgacaggcgaggactgtgctcagctgtcagacatagttcatctg
gacgactttgagagtgattataatgactatgttgaggacaagcaaaggagggtggaggaa
cctgtccaaacatccgctgccactcctgatcaacgtcaacaaagttcctcagtctggatg
gatccaagatttagtcagagccctaaacagcatctaaatgagaatgatacaaccaactca
gcgtactctaagaggtccactgtggcatcaaaccagggcgctcactgtgaaattgctcca
tcttcacaaataccaacagtcagctttgaccttggaaatgactgggatgattgggatgac
tttgatgatgatgaaaagttggtgcatgccagcgacacatcgtttgccacgtgtatagct
aatgctaaacctcaaattcagcagtctcttcagtgtaacaccccaggcttggctgctaca
gcagcaccagtactcctcggcctctcacaagtcaaaccgttaatgaccactgccaggaca
cctttgagtcctgaaatcagaaatgccagactctcgctggccacagtcagaacacagaac
agaatcacacttgactggaataaaaagaaacctaacatcttaagtgaggagatcacagta
aaagcaccagaaaatctcccgacacagactcatgtggccccagcgaccacaaggtttgat
tttttctcagtgataagcggcacaagtaatggcagctcatgtgtcaacaccagcaacaac
agcaaagaggaggaagctttccttgggatatttgatggtatattttag
DBGET
integrated database retrieval system
