Monopterus albus (swamp eel): 109970153
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Entry
109970153 CDS
T05607
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
malb03036
]
109970153 (tdrd12)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109970153 (tdrd12)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109970153 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
Dimer_Tnp_hAT
Urb2
Motif
Other DBs
NCBI-GeneID:
109970153
NCBI-ProteinID:
XP_020473185
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MLKLSVLKVENPSCFWGRVIWASGGNTQTTEQYDNLHTQMNLFYHNISWNLRKLNPRPIE
EGKVYVVYWPVMKSWCRAMVESVIMDSESCRARCLLVDHGEWLVAPSDQIRDAAQNFLQL
PVWVRKFHLGGIQPTTLRVSFLEKAKLVPSTRWDSSATLYLHNLLKDSTQAEAVLLESEP
ESTSIELYLTIRDIKICVNDDLVAKGFAYYSSTKSTDGSGLGEVVRFPVVPSSGLHQIVS
KTSNKPPSVRVNSLAAPRAGDLLTAPSPPQSQEHEQMISKAYGRSEVTEQPPGSQSKNSL
GAAAERASSEDPDLSPSAALTTDLSLFRSLKSLNSSTVYQQEAHSELNDCHPTEMTSVCI
TCTKQDELTSETVIPEEDVLLCMSGKSGAASFVESRQVHLPDAGDETSSSESGPTEKTWR
CIEDWACARLLEWLNPGRLNPNPHAADDVVVPSDPRRRGILLHTAFPVDPCTNLDDAPIT
DDLRRVLQRKQYSTLSLADRYSWPAVARGSNTLIVSHSADQPLSYLAPLVTHILYNSIFC
SNTYNTGPIAVLLCPGWEKAQMLYDLLEEIKVTHVLHPVIVLLGVGKDEAKSVKIPKNCL
LLVTTPFSLVLLLSCRCFMFMRLYHVVLDEADQLLTHAADQMVTILQHFQKVTFSEINAS
CPKQLIAVAKRWAGGMEGLVGTYMPSPFILITIPEELRSRMWLFSLLVVAPLRGECANLE
HAKPFLESKGLSYPKLGDLDWLEKFYFMVDMTSHLNTLNKNLHGKGSVALQLLEDVLEFE
RKMTVFARDVQREISQPDLEIELAKIADKDLWVSKFKSLTADLKEVAHQKANLAKQHKWN
DIENLPKPDKLVFETWSAIPDTYMNMKKYACGVLSIFGSTYLCEQVFSSMNFIKTKYCSC
LTNESLQSCVKTKLTPTQVSLLTLESSKISVMLGALEFNPDISQKTLIVASSAQEVEDVF
KVMKSKSTFCLRTHEGLTHQFDNVIQQWRKDIGPRSHVVLVTTTGCLECLGITDASCVIH
YSFPTSRKLFGNRLLCMADNFRNLADRDQTESHRSLARSVLLISERNISHIVGVVRYMGR
TNTLLPPVLLSFTQGILVTREYEKTNRPLCSYLKSFGVCRDSSMCPDRHRLISQLDQSEL
PASGVIQVVPLYVKTASLLYGHIIGKDDGGFHIMTSEMASYYADRKPGAKEMLVGGLYAV
EEDDVFHRVKILPVPDRHDGLFFRVQFIDVGKEQVLKSCQILELPEQFHSLPSQAVEMII
CHVKPVNAEKNWHPKVTRTIGQKIRGLVHQATAVLSLGNTVFVDPMVRVRQVPGLKTVIN
EYNIQSEILKTGMAVPNPDHVALLRALWQEEPSSGTEAVHIFG
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaactatccgttttgaaggttgagaacccttcctgcttctggggtcgggtcatc
tgggcgtcaggtggcaacacgcagaccacagaacagtatgacaatctgcacactcagatg
aatctcttctaccacaacatcagttggaacctgcgcaagctgaatcccagaccgatagag
gaagggaaggtatatgttgtgtattggccagtgatgaagtcatggtgtcgggccatggtg
gagtctgtaatcatggactctgagtcctgtagggctcgctgcctcctggtagatcacgga
gaatggcttgttgccccatcagaccagatccgagacgctgcacagaacttccttcagctg
cctgtctgggtaaggaagttccaccttgggggaatccaacctacaacattgcgagtgtcc
tttcttgagaaggcaaagcttgttccatccacccggtgggacagctctgctacactgtac
ctgcacaacctactaaaagattcgacacaggcggaggctgtgttgcttgaatccgagcca
gaatctacctccatcgagctctacttgaccatcagggacattaagatttgtgtgaatgat
gacctggtggccaaggggtttgcatattacagcagcaccaagtccactgatggcagcggc
ctgggtgaggtggtccgctttcctgttgtgccctccagcggtctacaccagattgtctcc
aagacctcaaacaaaccaccttctgtgagagtaaacagtctggctgcacccagggctggt
gatttgctaacagcaccctctccacctcagagccaagaacatgagcagatgatctccaag
gcatatggcaggtcagaggtcacagaacagcctccaggcagccaatcaaagaacagctta
ggtgctgctgcagagagggcctcttcagaggatccagacttgtctccatctgcagctctg
accacagacctcagtctattcaggtccctgaagtctctgaattccagcactgtctaccaa
caggaggctcacagtgaactgaatgactgtcatcctacagagatgacttcagtctgcatc
acctgcacaaaacaggatgaattaaccagtgagacggtaataccagaagaggatgtattg
ctctgtatgagtggaaaaagtggagctgcaagctttgttgagagcagacaagttcacctg
ccagatgcaggtgacgaaacaagtagctcagagtcgggcccaacagagaagacatggagg
tgtatcgaggactgggcctgtgcacggcttttggagtggttgaacccagggcgtctgaat
cccaatcctcatgctgcagatgatgtggttgttcccagtgatcccaggaggagggggatt
ctgctgcacactgctttcccagtggacccctgcaccaacctggatgatgcccccatcaca
gatgatctccgccgggtgttgcagaggaagcagtatagcactctctcactagctgaccgg
tacagctggccagctgtggctcgaggaagtaacacactcatcgtttcccacagcgctgac
cagccactcagctaccttgcccctcttgtcacccacattctttataactccatcttctgc
tccaacacctacaacacagggcctatagcggtgctactctgtccaggctgggagaaggcc
cagatgttgtatgatcttttggaggagatcaaggttacccacgtcctgcaccctgtcatc
gtgctgctgggtgttggcaaagatgaggccaagtctgtcaagatccccaaaaattgcctg
ctattagtgaccactcccttcagcctggtcctcctgctgtcctgccgttgcttcatgttc
atgcgtctgtaccacgtggtgttggacgaggccgaccaactcttgactcatgctgcggac
cagatggtgaccatcttgcagcacttccaaaaggtgaccttcagtgagataaacgcttcc
tgtcctaagcagcttattgccgtggcaaagcgatgggctggtggcatggaggggttggta
ggcacttacatgccatccccattcattctcataaccatacctgaagaactccggagccgc
atgtggctcttcagtctccttgttgtggctcccctccggggggagtgcgcgaacctggaa
catgcgaaacccttcttggaaagcaaaggcctcagctatcccaaactgggagaccttgat
tggctggaaaagttttatttcatggtggatatgaccagtcacttaaacacgctgaataaa
aatctccatggaaagggaagcgtggccctgcagttgctggaggatgttctggaatttgag
cgcaagatgacagtgtttgccagagacgtacaaagagagataagtcagcccgatcttgaa
attgaactggccaagatagcggataaagacttatgggtatccaagttcaaaagcctgaca
gcggatctcaaagaagtcgcccatcagaaggccaatctggctaaacagcacaaatggaat
gatattgaaaacctccccaaacccgacaaacttgtttttgaaacatggagtgccattccc
gacacatatatgaacatgaaaaagtatgcatgtggagtcctgtccatctttggctcaaca
tacttatgtgagcaagttttctcgagcatgaacttcataaagaccaaatattgctcctgc
ctcacaaatgagagcctacagtcctgtgtgaagaccaaactcaccccgacacaggttagc
ctcctgaccctagagagcagcaagatctctgtaatgctgggtgcactggagttcaaccca
gacatcagccagaagactctgattgtagccagctctgctcaggaggttgaagatgtgttc
aaggttatgaagtcaaaatcaacattctgcctcaggacccatgagggcttaacacaccag
tttgacaatgtcatccagcagtggaggaaagatatcggccctcgcagtcatgtcgttctg
gtgaccaccaccggctgtctggagtgtcttgggatcacagatgcatcttgtgtcatccat
tacagtttccccacttctcggaaactgtttggcaaccggctgttgtgtatggctgacaac
ttcagaaacctcgcagacagagatcaaacagagagccaccgttctctggccagatcagtg
ctgctgatctctgagaggaacatcagccatattgttggtgttgtgcgttacatgggacga
accaacaccctgttgcctcctgtgctgctgtccttcacccagggcattcttgtcacccga
gagtacgagaagaccaacaggcctctgtgcagctacctgaagtcctttggagtctgcaga
gacagcagtatgtgtcccgaccgtcacaggctcatttcccagctggatcaatctgagctc
cctgcctctggagttatacaggttgtgcctctatatgtgaagacagcatcactgttgtac
ggtcatatcatcggcaaagatgatggtgggtttcacatcatgacatcggaaatggcatct
tactacgccgacaggaaaccaggagccaaagagatgctggtgggaggcctatatgctgtg
gaggaggatgacgtcttccacagggtgaagattctccctgttcccgacagacatgacggt
ctgtttttcagggttcagtttattgacgtgggaaaggagcaggtgctgaagtcctgccag
atcctcgagctgccagagcagttccactcactgcccagccaggctgtggaaatgatcatc
tgccacgtcaaaccggtcaatgctgagaagaactggcaccccaaggtgaccagaaccatc
gggcagaagatcagaggtctggtgcaccaagccacggcagttcttagtctgggaaacaca
gtttttgttgatcccatggtccgggttaggcaagtcccaggtttgaaaaccgttattaat
gaatacaacatccagtctgagatcctcaagactgggatggcagtccccaacccagaccat
gtggctttgctcagagcgctgtggcaggaggagcccagcagcggtactgaggctgttcac
atttttgggtga
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integrated database retrieval system
