Monopterus albus (swamp eel): 109970197
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Entry
109970197 CDS
T05607
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109970197 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109970197 (cnot3)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109970197 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109970197 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
109970197
NCBI-ProteinID:
XP_020473249
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MQSHNMKDILDPEIMMHEYGIHLVPRQLCDRRNVDIVVVRAMADKRKLQGEIDRCLKKVA
EGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLVE
NRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQREKEETGQWLTTTIDTLNMQV
DQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHIRMLETILRMLDNDSVPVDA
IQKIKDDVEYYIDSSQDPDFEENEFIYDDLDLEDMPAALVATSPSGQGNVEDEMYLHSSS
TPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSPVKNGTPSLLPSFSSSTTSG
SSSSSSLVSMATVVGGIPTVPTSSNLIGSFSSAVQQHQHQPAQQQQQTQPPNQTQQPPQT
KPSVPSNNTPSPPSNPLIPASTSPSLPTPSTPSSSAPNSQSQPTSGPTSVSSLGLGLGLG
LSKAGMTGTSNANQISGLSLGVHPTLNTMTGLLSGSTPAPYAQAAAAGGLGLNSTTQSNI
SVESSTSIPTSGSSGVTTNGAGTGLTLLGSSPAHSSLSGSILSLVSGQSIAPGASQVPPS
SVSSSAVVGMMGGNGGNVGVVGGVGVNAAPARPPSGLKQNGSTSYSAVVAESSTDSALST
PSQSQSSQPSSLSSSASQPMDNGPSLISSNTLSPSSPSPSFSDSTHGGVSLFNGPHSYTQ
ASEGLKPPELSSLKAIAERAALGSGLDGEIPNLHLTDRGRNDIFSSSSAAPGTPAAPQPS
ISEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTLP
FHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHTKYMMWFQ
RHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccacaatatgaaggatatactggaccccgaaataatgatgcatgaatatggt
attcatcttgttccgcgccaactttgtgacagacggaatgtggacattgtcgtagtcaga
gccatggctgacaagagaaaactccaaggtgagatcgatagatgtttgaaaaaagtagca
gaaggtgttgaacagtttgaagacatctggcaaaagctccacaatgcagccaacgcaaat
caaaaagaaaaatacgaggcagatctcaagaaagagattaaaaagctacagcgattgaga
gatcagataaaaacatgggtggcctcaaacgaaatcaaagacaaaaggcagctagtcgag
aaccgcaaacttatagagacgcaaatggagcggtttaaggtggtggagcgtgaaacaaaa
acaaaagcctactctaaagaaggcttggggctcgctcagaaagttgatccagctcagagg
gaaaaggaggaaacgggacagtggctaacgactacaatagacactctaaatatgcaggtg
gatcaatttgagagtgaggtggaatctctttcagttcagaccagaaaaaagaagggtgat
aaagagaagcaagatcgtattgatgagctcaagcggttaattgagaggcatagattccac
attcgcatgttggagaccattttacgaatgctggacaatgactctgtgccagtggatgca
atccagaagatcaaggatgacgttgaatactacattgattcctcccaagacccagacttt
gaggagaatgaattcatctatgatgacttagacctggaagacatgccggcagcattagtc
gcaacttctccgtcgggccagggcaacgtggaagatgagatgtatctccactccagctcc
actcccacttccaccacctcctcttcacccattcctccatccccagctacttgcactgct
gagaactcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcagtca
cctgtgaagaacgggaccccatctttgctaccttccttctcatcctccaccacctctggt
tcctcttcatcctcctcccttgtgtccatggcgactgttgttggaggcattcccacagtc
cccacgagcagcaatctaataggaagcttcagcagtgcggtgcagcaacatcagcatcaa
cctgcacagcagcagcaacaaactcagccaccaaaccaaacacagcagccaccccagaca
aaaccctctgtcccctcaaacaatacccccagcccacccagcaaccccctaatcccagcc
tccacttccccctctctccctacacccagcacacccagttcatcagctcccaactctcag
tctcagcccacatctgggcccacctcagtatccagtttgggacttgggctggggctagga
ttgagcaaagctggcatgactgggaccagcaatgctaaccaaatatctggtttgagccta
ggtgtccaccccactctaaacacaatgacagggctcctttcgggctccacacctgcccct
tatgcacaggcagcagctgcaggaggcttgggtttgaacagcaccactcagtccaacatt
tctgtggagagcagcacttccattcccacctctggctccagtggagtcaccaccaacggg
gcagggactgggctcactttgcttggttccagcccggctcacagctctctgagtgggagt
attttgagtctggtttctgggcaaagcatagcccctggtgcttctcaggtgcccccaagt
tctgtcagctcttctgctgtagttggcatgatgggaggcaatggagggaatgttggtgtg
gttggaggagtaggggtgaatgctgcacctgctagacctccaagtggactgaagcagaat
ggaagcacaagttacagtgctgtagtggcagagagctccacagattcagctctaagcaca
ccgagccagtcacaaagcagccaaccctcatctctcagttcttcagctagtcagccgatg
gacaatggtcccagtttaatcagttccaacaccctgtctcccagctctccatcgccctcg
ttttcagacagcacacatggaggagtgagtcttttcaatgggccccactcctacacacag
gcatctgagggcctcaagccccctgagctcagttctttgaaggcgatagctgagagagca
gcactgggatcaggcctggatggagagatacccaacctgcacctaacagacagaggtcgg
aatgatattttctctagttcgtctgccgcacccggcacgcctgctgctcctcagccatcc
atatcagaggtcagcatccccccctcgcttggggtctgtccactgggccccacccctctc
cccaaagaccagctctaccagcaggccatgcaggagtctgcatggacacacatgccacat
ccctctgactctgagagaatcaggcaatacctgatgaggaacccatgtcccaccttgcct
ttccatcatcaggtcccaccacaccactcagattccatagagttctaccagagactgtcc
acagaaactctctttttcatcttctactacctggagggcaccaaagctcagtatctgtct
gccaaggctctaaagaaacagtcatggcggtttcacaccaagtacatgatgtggtttcag
aggcacgaggagcctaagactatcactgatgagtttgaacagggcacttacatttacttt
gactatgagaaatggggccagaggaagaaggaggggttcacctttgagtacaggtacctc
gaagaccgagacctgcagtga
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