Monopterus albus (swamp eel): 109971911
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Entry
109971911 CDS
T05607
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109971911 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109971911 (exosc8)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109971911 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109971911
NCBI-ProteinID:
XP_020476134
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MTRGILLGFCSVQSFGEKENCRPDGRELSEFRTTTLNIGPITTADGSALVKVGNTTVICG
VKAELANPTVETPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQT
EDLCIERGKLCWVLYCDMICLDYDGNVLDACVIALLAALKNTQLPEVTINKETSAPEVNL
ERRHGLHIHKHPVGASFCVFDDSILIVDPTAEEESLSTAHLTVVTDEEDRLCSVHKPGGT
SLSGEKLQECISRATVRQREIQELIDKVIHSVKTAH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgacacgggggatactgctgggtttttgttcagttcagtcattcggggagaaagaaaac
tgtcgacctgatgggcgggagctgtcagaattcagaaccacaacactaaacatagggccc
ataaccacagctgacgggtcagccctggtgaaggttgggaacaccacggtcatctgtggc
gtcaaagcggagctggcaaaccctacagtggagacacctggtaaaggttacattgtaccc
aacgtggatctgccacctctgtgctcatctcgatttcggccaggcccaccaggagagcag
gcacaggctgccagccagttcatcgctgatgtaatcgaaagctctgaagtgatacaaaca
gaggacctgtgcattgaaagaggaaagctctgctgggtgctctactgtgacatgatatgt
ctcgactatgatggaaacgtgctggatgcttgtgtcattgccctgctggctgccctgaag
aatactcagctcccagaggtcaccatcaacaaagagacaagtgcacccgaggtgaattta
gaaagaagacatgggttacatattcacaaacacccagtcggagcctctttttgtgtcttc
gatgactctatactgatcgtggaccccacagctgaggaggaaagtctgtcgaccgctcac
ctcactgtggtgacagatgaggaggatcgactctgctctgtacacaaaccaggtggaacg
tcactgtccggagagaagctgcaggagtgtatcagccgagcaacagtgcgacagcgagag
attcaggaactcattgacaaagtcatacatagcgtgaagacggcacattaa
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