Monopterus albus (swamp eel): 109972003
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Entry
109972003 CDS
T05607
Symbol
helz
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109972003 (helz)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
109972003 (helz)
3'-5' decay
Other 3'-5' decay factors
109972003 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
ResIII
PAM2
zf-CCCH
Mov-10_helical
PhoH
AAA_22
AAA_16
TPR_1
AAA_7
SRP54
Motif
Other DBs
NCBI-GeneID:
109972003
NCBI-ProteinID:
XP_020476242
LinkDB
All DBs
Position
Unknown
AA seq
2022 aa
AA seq
DB search
MADRRAEKSCEEASRSLVRREYEAAVSHSTDALVVLAPQAPSSGVSVLPSPPSLASTGPL
RSRALLYRIAAFLQLKNYDEADEDCKHVLAEDIASGNGSLQASLRSMLLDGSLQEVASIL
SKALYGEPMNGIVTKDLTRLKMLLSEIETINTEMATEYADDQEEEVQDGWQFRPPPRGVT
SSEEYTLCKRYLEQGLCRYRAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYM
ETLIEKWMNSLSPEKVLSDCLEGVNVETSSSLSVTVTTKKSSHSWTFSLLCKPARKLYRV
ALLYDAHRPHFFITGVSGGEQLQAVPKGCQEWTPGEETALAADNGLDHCIYKVAVGFSTE
IFGTFRQTVVFDFGSEPVLMQRIMVDAASIEDLEHLMAARQQLLITAKRWDSSCKTIVEF
SPNEMAELERSLLSRYQIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKEVS
KFNIKVNLQLVTSFMLTGISVGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVLL
LPLGREGVSSQPPPGVKERVYEAVIEEKTKEYIFLRICRDCCEELVLQPDREIQVELQFQ
LNRLPLCEMHYALDRIKDNTILFPDVSLVPTIPWSPNRQWDEQLDPRLNAKQKEAILAIT
TPISITLPPILIIGPYGTGKTFTLAQAVKHILRQEHSRVLICTHSNSAADLYIKDYLHPY
FEAGNPHARPLRVYFRNRWVKTVHPVVQQYCLISGTQVIFQMPTREDILRHRVVVVTLST
SQYLCQLDLEPGLFTHVLLDEAAQAMECETIMPFALASKTTRIVLAGDHMQLSPFVYSEF
ARERNLHVSLLDRLYEHYPPEFPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPSH
KDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVVS
PYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQ
LVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFISICHEN
ASLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPLQVHHASSQPLHSHHHLHPQ
HAQSASNKQGVQQQQSPPKGKHANHTEHLPPEGYVQPNPAVLMGNPIRAFTPPLGGTPAG
MGKSPSPVQRIDPHTGTSILYVPAVYGGNMVMPMPLPLPWTGYQNRFAVDPRIISHPAAM
AYNFNLLQAQNRGSPVPYSGVAHPSSLGMGQPSPDKELQADSIRNGKLEGCLKSEKSRLQ
TPERKNVDMKEKQGDLDTGQSRSLDSQTDALVGFPNALIHRNDPSAAQRPLNYHLASPSP
AFPPRAASGRALPPQYPVSRLPYRVSQPQHPGMAQQSQQQQLSPAYAGSTHNASFFSGPI
PPHRAVQSPTLDGSESGGVEEMSSSIRPPLGHPGGHHPGLSQHNRVNSFGEDGQDGSLGD
GLDLQGSLALEALSQQQQQAARLGQWGEAAGPFLQGSVAFPLPQQLAHLAQPGMARFPHQ
LLRAASWALSANMEDDTVASASSGPAFTRYPGLLREMPPQEQPEPREAAEMQPPPQSRLL
QYRQSRASGDPSSSIAATSNHAGPFPSGPYSHDAGRDLLNDNLLSNPALQQQHPGNSLYN
TGSYQHQPPAHSASPPPSQVKYLLQEAQWSHSGAPSVNPPQQNHPLGNQGHSLPYGLPIM
AHPSRQEQVHLMQLHHQHHQQQQQQHHQQQSQGTDQESYHPLSPRTSAATALHNVDEYEP
RGPGRPLYQRRISSSYPDEQSPANTHSALSQQSQPCTSDHQDHPQMHMQHHQHPHAPYVY
PSHDPWPSNGGGPGPFQNIPCNGVSTLAQHRDLLGGPVAAPKALRQPEEQLKAEATAAQQ
HPHSLNSFQHLGQFPPLMPNNKQQPARPPPPPPPQAPLEPNQGAPNLSKQPTMSYASALR
APPKPRAVRPEQVKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaggagagcggagaagtcatgtgaagaagccagcagatcgttagtcaggcgg
gagtatgaggcagcagtgagccacagcacggatgccctggtggtccttgcaccccaagcc
ccatcctctggtgtctctgttttgccgagccctccatcccttgcctccaccggacccctc
cgcagccgtgccctgctctatcggattgctgccttcctgcagctgaaaaactatgatgaa
gcagatgaagactgcaaacatgtcctggcagaagacattgccagtgggaatggttcgcta
caggccagcttgcgctcaatgctgttggatggaagcctgcaggaggtggccagcatcctc
tctaaagccttgtatggagagccaatgaatggcatagtcacaaaagacctgaccagatta
aaaatgctcctttcagaaatagagactataaacacggagatggcaacagaatatgcagat
gaccaggaagaagaggtccaagatggctggcagttccggcctcctccccgaggagtcacc
agcagtgaggagtacaccctctgtaaaaggtacttggagcagggcctctgtcggtaccgg
gcccaatgtacgtcagcccactcccaggaggagctgatggagtggcagaaacgctatgcg
tcacgcctcatccgcctcaaacagcagcaggagagcaaacacttcactgaaaactacatg
gaaactctgatagagaagtggatgaactctctctccccagagaaagtgctgagtgactgt
ttagaaggagtgaatgtagaaaccagcagcagcctttctgttactgtcacaaccaaaaaa
tcctcccactcctggaccttctcattgttgtgcaagccggctagaaaactgtaccgcgtc
gcccttctctacgatgcgcaccgaccacacttcttcatcacaggtgtgtcaggtggggag
cagctccaggccgtacccaaaggctgccaagagtggactccgggagaggaaactgcattg
gctgcagacaatggcctggaccactgtatctacaaggtggcagtgggcttcagcacagag
atctttggtacctttcgacagaccgtagtttttgactttggatcagaaccagtgctgatg
cagcggatcatggtggatgctgcctctattgaagatcttgagcacctgatggcagcgagg
cagcagctcttgataactgcaaagcgctgggactcttcctgtaagaccattgtagaattc
agtcctaatgagatggctgaactggagcgcagcctcctttcgcgctaccagatccctctg
tcggctgaccagctcttcacccagtcagtcctggacaagactctgaccaaagacaactac
caggcccgactgcacgacctgctctacatagaggagattgcacagtacaaggaagtcagc
aagtttaacatcaaagtgaacctccagctagtcaccagctttatgctgaccggcatttct
gttggagccaagtatgctcagaatgggcagctctttgcacgtttcaaactcaccgaaaca
ctttctgaggacacactggccgggcggctagtgatgaccaaggtaaattcagtcctgctg
ctgccactgggccgtgagggggtcagcagtcagccaccccctggggtcaaagagcgcgtt
tacgaggctgtgattgaagagaagaccaaggagtacatcttcctaaggatctgcagggac
tgctgtgaggagctggtgctacagcctgacagagaaatacaggtggagctccagttccag
ttgaacagactgccactctgtgagatgcactatgccctggatcgcatcaaagacaatacc
atccttttccctgatgtgagccttgtccccaccatcccctggagccccaacaggcagtgg
gatgagcaactggatccccgtctgaatgccaagcagaaggaggccatcctggccatcacc
acacctatctctatcaccctgcccccaatcctcattattgggccctatggcactggcaag
accttcaccctggcacaggctgtcaagcacatcctccgccaggagcacagcagggtcctg
atttgcacccactcgaacagtgcagctgacctttacattaaagactaccttcatccttat
tttgaagcgggcaatccacatgccagacctctcagggtatacttcaggaaccgctgggtg
aagacggtccatccagtagtccagcagtactgtctcatctctggcacacaggtcattttc
cagatgcccacaagggaggacatcctcaggcaccgtgtggtggtggtcaccctcagcacc
tcccagtacctctgccagcttgacttggagcccggtttgttcactcatgtcctgttggat
gaagcagcccaggccatggagtgtgaaaccatcatgccttttgctctagctagcaagacc
acccgcattgtgctggctggagaccatatgcagctcagtccatttgtgtacagcgagttt
gcgcgggagcgcaacctgcacgtgtcactgctggaccggctgtacgagcactacccccct
gaattcccctgtcgcatcctcttgtgtgagaactatcgctcccatgaagctatcatcaac
tacacatcagagctattttatgatgggaagctaatggcaagtgggaaacagccatcccat
aaggacttctaccctttgaccttcttcacagccagaggagaagatgtccaggagaagaat
agcaccgcctactacaacaacgcagaggtatttgagatcgttgagcgggtggaggagatg
cgcaagaagtggccagtggcctggggcaagctggatgagggtagcattggggtggtgtca
ccatacgctgaccaggtgttccgtattcgtgctgagctccgaaagaagagaatgcatgag
gtcagcgtagaaagagtgctcaatgtccaaggtaaacagttccgggtgctgttccttagc
acagtacggacacggcacacctgcaagcacaaacagacggccatcaagcgtaaggagcag
ctagtcgaggactcaacagaggaccttgactatggctttctctccaactacaaactactc
aacacggccataaccagagcccagtcccttgttgctgttgtgggagatcccatagcactg
tgctctgttggacgctgcagaaaattctgggagcattttatctccatctgccatgaaaat
gcaagtctacatggcatcacctttgagcagatcaaggctcagctggaggccttggagctc
aagaagacctatgtcctcaacccgctggccccagagttcatcccccgtgccctcaggccc
ttgcaggttcatcacgcttcttcacaacccctccattcccaccatcacctgcatcctcag
catgcacagtcggcctccaacaagcagggtgtgcagcagcagcagtcaccccctaaggga
aaacatgcaaaccacacagagcaccttccacctgaaggatatgtccaacccaacccagcc
gtgctaatgggaaaccctattcgcgcatttacaccacccttgggtggcacaccagctggc
atgggcaagtcaccgagtcctgtgcagagaatagatcctcatacaggcaccagtatcctc
tatgttccggctgtgtatggtggaaacatggtcatgcccatgcccctgcctttgccttgg
acaggttaccagaatcgctttgctgtggaccctcgcatcataagccacccagcagccatg
gcctataacttcaacctgttgcaggcccagaatcgaggctcccccgtcccttacagtggg
gtggcccatccttcttctctaggcatgggccagcccagccctgacaaggagctacaggca
gactccatcagaaatggtaaattagaaggatgtctaaagtcagaaaagagtcgtcttcag
acaccagagagaaaaaatgtagacatgaaggaaaaacagggagatttagacacaggccaa
agtcgaagtctagactctcagacagacgcgctggttggatttcccaatgctctgatccat
cgaaatgacccctcagctgcccagagacccctcaactaccacctggcatcacccagccca
gcttttcctccacgtgctgctagtggaagagccctccccccacagtatccggtttccaga
cttccttatcgggtcagccagcctcaacacccaggaatggcccaacagagtcagcagcag
cagctcagtcctgcttatgctggtagtacccacaatgcttccttcttcagtggccccata
cctcctcacagggctgttcagtctcccactttggatggatcagagtctggaggtgtggaa
gagatgagcagctccattaggcctccactgggccacccagggggccaccacccgggtctg
tcacagcacaacagggtcaacagctttggggaggatggacaggatggaagcttgggagat
ggtctggacctccagggttccttggctctagaggccctgagccagcagcagcagcaggca
gccaggctgggccagtggggggaggcagcaggacctttcctccaaggcagtgttgccttc
cctctgccccaacagcttgcccatcttgctcaacctggcatggctcgcttcccccatcaa
ctgctccgggcagctagctgggcccttagtgccaacatggaggatgacactgttgcttct
gcctcctctgggccagcgttcaccaggtaccccggcctcttgagagaaatgcccccacag
gaacagcctgaacccagggaagcagctgagatgcagcccccacctcagtctcgtctcctt
cagtaccgtcagtcccgtgcctcaggtgacccttcctcctctatagctgccacttccaac
cacgctggaccttttccatcaggaccttactcccatgacgctggccgtgacctcctgaac
gacaaccttctcagcaacccagctctgcagcagcagcacccaggaaactctctctacaat
actggtagctaccaacatcagccaccagctcattctgccagcccccctccctcccaggtt
aaataccttctgcaagaggcccagtggtcccacagtggcgctccatcagtgaacccacca
cagcagaaccacccattagggaaccagggccacagccttccttatggactgcccatcatg
gctcaccccagcaggcaggagcaagtccacctgatgcaacttcatcatcagcaccaccag
cagcagcagcaacaacaccaccaacaacaaagtcaaggtacagaccaggaatcctatcac
ccactgtctccaagaacatcagcagctacagcccttcacaatgtagatgagtatgaaccc
cggggtccgggtcggcctctctatcaacgccgcatctcctccagctacccagatgaacaa
tctccagccaacacccacagtgccctgtcacagcagtcccagccctgtacatcagaccac
caggaccacccccagatgcacatgcaacatcatcagcacccacacgccccctatgtctat
ccctcacatgacccctggcctagtaatggtggaggtcctggcccgttccagaacattcca
tgtaacggagtcagcacactcgctcagcaccgtgatctcctggggggacctgtggcagct
cccaaggctcttcgtcagccggaggagcagttgaaggctgaggccacagcagcacagcag
cacccacactccctcaactcctttcagcaccttggacagtttcctcctctcatgcccaat
aataaacagcagccagcccgccccccaccgcccccaccgccacaggctcccttagagccc
aatcagggggctccaaatttgagcaaacaaccaaccatgtcctatgcgagcgccctccgg
gccccacccaagccccgagctgttcgccctgaacaggtcaaaaagaatagcgaccctctc
tccctcctacaagagctgagtataggaagttcaaatggtagcaatgggtactattcatac
tttaaatga
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