Monopterus albus (swamp eel): 109972678
Help
Entry
109972678 CDS
T05607
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109972678 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109972678 (sf3b1)
03036 Chromosome and associated proteins [BR:
malb03036
]
109972678 (sf3b1)
Spliceosome [BR:
malb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109972678 (sf3b1)
Complex B
109972678 (sf3b1)
Complex C
U2 SnRNP specific factors
109972678 (sf3b1)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109972678 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
109972678
NCBI-ProteinID:
XP_020477351
UniProt:
A0A3Q3JVB5
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKATLLEDGQQGVGLDSTGFYDQEIYGGSDSRFAGYVTSI
AANEQEDDDEDDTSTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPQKIAEREDEY
KARRRQMIISPERLDPFADGGKTPDPKMQVRSYVDVMLEQNLSKEEREIRQQLAEKAKSG
DLKVVNGSAATQAVAKRKRRWDQTADQTPSNATPKKMSSWDQADASAETPGHTPAHTPSN
SRWDETPGRPKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGGATGSVRK
NRWDETPKTDRETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGSST
PLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPE
GYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQAEDRTTKQMNDQPSGNLPFLKPD
DIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGP
LFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR
VEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA
VCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIA
ALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVM
LILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNY
RQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEE
QLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQ
AADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMT
PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHK
KAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP
ALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASA
VVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYC
LQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQVYNDEKNVFVRYELEYVL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacgcacgaagatatcgaggcccagatcctggagatccagggg
atgaaggctaccctgctggaggatggacagcagggagtgggccttgactctactggcttt
tatgaccaggagatctatggaggcagcgatagccgctttgctggatatgtcacctccatt
gctgccaatgagcaggaggatgatgatgaagatgatacatcaactagcttgttggggcaa
aagaagccagggtaccatgcgccagtggcaatactcaatgccattcctcagtcagatgag
caatatgacccatttgcagagcatcgcccacagaagatcgcagagcgagaagatgaatac
aaagcccgacgcagacagatgatcatctcaccagagcgtctcgaccctttcgcagatgga
ggtaaaacgccggaccccaagatgcaggtcaggtcatacgtggacgtcatgttggagcag
aacctgtccaaagaggagcgagagattcgtcagcagctggcagagaaggccaagtcaggg
gacctgaaagttgtcaatgggtccgctgccactcaagctgtcgcaaaacgcaagcgccgc
tgggaccaaacagctgaccaaaccccctctaatgctacacccaaaaagatgtccagctgg
gaccaggctgatgccagtgctgagactccaggacacacccctgcacacacaccctcaaac
agccgatgggatgaaaccccaggccgccctaaaggcagtgagaccccaggggccactccc
agtacccgcatgtgggagcccactcccagccacacacctgctggtgccgccacccctggc
agggacacacctggccacgccacacctggccatggtggagccacaggtagtgtgcgcaag
aaccgctgggatgaaaccccaaagacagacagagagaccccaggacacgggagcggctgg
gctgaaaccccacgcacagacagaggagacgagtctgtgggcgagactccaacccctggg
gccagcaagaggaaatctcggtgggatgaaactcctgccagtcagatgggatcctcaaca
ccactacttaccccaggaaaaacacccataggaacaccagccatgaatatggctacccca
acaccaggtcacctgatgagcatgactccagagcagctgcaggcgtggaggtgggaacgg
gaaattgatgagaggaaccggcctctcaccgatgaggagcttgatgccatgttcccagag
ggatacaaggtcttgcctccaccagcaggctacgtgccaatccgtactccggcccgtaag
ctgtcggccacacccactcccattgggggcatgacaggcttccacatgcaggccgaggac
cgtaccacaaaacagatgaacgaccagccctctggaaacctccccttcctcaaacccgat
gatatccagtactttgacaagctgctggtggaggtggatgagtccaccctgagccctgag
gagcagaaagaaaggaagatcatgaagttgctgctaaagattaaaaatggaacaccaccc
atgaggaaggctgctctgcgtcagatcacagataaggctcgtgagtttggagcgggcccc
ctgttcaaccagatcctgccactgctcatgtcgcccaccctagaggaccaggagcgccac
ctactggttaaagtgattgaccgcattctctacaaactggatgacctggttcggccatat
gtacacaagattctggtggttattgagcctctactgattgatgaggactactatgccaga
gtagaaggcagagaaatcatctctaacttggcaaaggctgctggtctggctacaatgatc
tccacaatgcgacctgacattgacaacatggacgagtacgtcagaaacaccacagcccga
gcctttgccgtggtggcctcggccttgggtattccctctctcctgccattcctcaaagcc
gtctgtaaaagcaagaagtcctggcaggcgcgccacacaggcatcaagatcgtgcagcag
atcgccatcctcatgggctgcgccatcctgcctcacctccgcagcctggtggagattatc
gaacatggtctggtggatgagcagcagaaggtgaggaccatcagtgccctggctatagct
gctcttgctgaagctgctacaccctacggtatcgagtcctttgactctgtgctcaagcca
ctctggaagggtatcagacagcacagaggaaagggtctggctgctttcctcaaagctatc
ggttacctgatccccctgatggatgccgagtatgcaaactactacacccgagaggtgatg
ctgatcctcatcagagagttccagtccccagatgaggagatgaagaagattgtactcaag
gtggtgaagcagtgttgtggcactgatggtgtggaagctaactacattaagactgagatc
ctgccccccttcttcaagcacttctggcagcacaggatggctctggacaggcgcaactac
agacagttggtggacaccacagtggagttggccaacaaggtgggagcagcagagatcatt
tctcgcattgttgatgacctgaaagacgaggcagagcagtacagaaagatggtgatggag
accatcgagaagattatgggcaacctgggcgcagcggacatcgaccacaagctggaggag
cagctgatcgatggcatcctgtatgccttccaggaacagacaacagaggactctgtgatg
ctgaatggtttcggcacagtggtgaacgcccttgggaagcgtgtgaaaccctacctgcct
cagatctgcggtacagtgttgtggcgtctgaacaacaagtcagccaaagtccgtcagcag
gctgctgacctgatttcccggactgctgtggtcatgaagacctgccaggaggagaagctg
atgggtcacttgggtgtggtgctgtatgagtacctgggagaggagtaccctgaggtgctg
gggagcattctgggagcactgaaggccattgttaatgtcattggtatgcacaagatgacc
ccaccaatcaaagacctgcttccccgtttgactcccattctgaagaacagacatgagaag
gtgcaggagaactgtatcgacctggtgggcaggattgctgacaggggtgctgaatatgtg
tcggccagggagtggatgaggatttgtttcgagctgctggagctgctcaaggctcacaaa
aaggccatccgcagagccactgtcaacacatttggttatattgccaaagccatcggcccc
catgatgtgttggccactctgctcaacaacctgaaggtgcaggagcgtcagaacagagtc
tgcacgaccgtggccatcgccatcgtcgccgagacctgttcaccgttcacagtgctgccg
gcgctcatgaatgagtaccgtgtgcctgagctcaacgtgcagaacggcgtgctcaagtcc
ctgtccttcctgttcgagtacatcggagagatgggcaaggactacatctacgctgtgacg
ccactgctggaggacgcactcatggacagagacctggtccacagacagacagccagtgca
gtagtgcagcacatgtctctgggcgtctatgggttcggctgtgaggactccctcaaccac
ttactcaactacgtgtggcccaacgtgtttgagacgtcgccccatgtgatccaggctgtg
atgggtgccctggaggggctgcgggtggccatcgggccttgccgcatgctgcagtactgc
ttacagggtttgttccacccggccaggaaggtgagagacgtctactggaagatctacaac
tccatctacatcggctcacaagatgccctcatcgcacactatccacaggtctacaacgac
gagaagaacgtctttgtccgctatgagctggagtatgtcttgtaa
DBGET
integrated database retrieval system
