Monopterus albus (swamp eel): 109972792
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Entry
109972792 CDS
T05607
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03013
Nucleocytoplasmic transport
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109972792 (pnn)
03015 mRNA surveillance pathway
109972792 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109972792 (pnn)
03041 Spliceosome [BR:
malb03041
]
109972792 (pnn)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109972792 (pnn)
Spliceosome [BR:
malb03041
]
Complex C
Other components
EJC/TREX
109972792 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
109972792
NCBI-ProteinID:
XP_020477583
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKHVDDNIRKLTGRDPNESRPGQIRRLGPMAGLGGGRGRGIN
LLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDARNDSDAEDDDDVKKPALQSSVV
ATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNISSEKQKRRSEIEQKL
EVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTKT
KPHIFYLPGKMCSATQKLLDDSTKKLNVVFEERREAFAEHLSKMESRPRRQPNRDQDGNT
AASGTDHSVEGKPAGQVVKVTGNKRDAEMEEEEEREESEKVGNRKVTEKGGREEEELEGL
QKVDEERMELGEEGSEEKKEVEEGIKGREERDETSPGSEEMELEGGDRSKEEVGKTDNQA
LIDIQNEKGQHAQSHEPSITSQEAPDTSRQPHPSPSAGEPAVQSSDTQEAFATPEPQTAS
TTSGLDFIMPGLEVQDSAEESQAVEGKSGDEVPQNLPDSQEVPSSTAAPSKEDEDSGRGR
KKEKELRKGRSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSNSSSRSRSRD
SGKRKRPLDKGRDRKKEEQSHSKRGGNIGGGRDSKGSKESRKRRSEEGRARSSRSDREHR
DRKDKRR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgtggtacggagcttgcaggaccagcttgaaaaagccaaggaaagtttgaaa
catgtggacgataatattcgtaaattaaccggacgtgaccctaatgagtcgagaccgggc
cagatccgccggcttggccccatggcaggcctcggtggaggtaggggtagaggaatcaat
ctgctcaggcgtagtctctcagacatgggaagcggcggccctcctgccaagcagagggac
attgaaggagccctgctgaggctggcaggggaccaaagggccaggagagatgcgcgaaat
gacagcgacgccgaggatgatgatgatgtcaaaaagccggcgttgcagtcatctgtggta
gctacctccaaggagagaacacgccgagacctcattcaagatcagaccatggatgagaag
ggcaaacaaaggaatcggcgtatgttcggcctgctgatggggacactacagaaattcaaa
caggaatccaatatctcttcagagaagcaaaagcggcgctcagagattgagcagaagctc
gaggttcaggctgaggctgagaggaagaaggtggagaatgaaaaaagggagctgtttgaa
gagaggagagccaaacagactgagctgaggttactggagcagaaagtggaattagctcag
ctgcaagaggagtggaccagccacaataaccgcctggtgaagtacatccgcaccaagacc
aagcctcacatcttctatttgcctggaaaaatgtgctccgctacacagaaactcctcgat
gactccaccaagaaactaaatgttgtgtttgaggagaggcgtgaggcttttgccgaacac
ctcagcaagatggagtcccgcccccggcgacagccaaaccgcgaccaggacggcaacaca
gcagcatctgggacggaccactcggtggagggtaagccagcaggtcaggtagtcaaggtg
acaggtaataagagggatgcagagatggaggaagaggaggagagggaagagagtgaaaag
gtaggaaatagaaaggttacagagaagggggggagggaggaggaggagctggaagggtta
caaaaagtagatgaggagaggatggagttaggtgaggaaggtagtgaggagaagaaggaa
gtagaggagggcataaagggcagagaggagagagatgagacaagtcctgggtcagaagag
atggagctggaggggggggacaggagtaaggaagaggtgggaaaaacagacaaccaggcg
ctcatagacatccaaaatgaaaagggccaacacgcgcagtcccatgagccatccataacc
agccaagaagcacccgacaccagtcggcagccccatcccagcccctctgcaggggaacca
gctgtacagtcttcagacacccaggaggcctttgctaccccagaaccccagacagcctcc
accacgtctggactggatttcatcatgcctggccttgaggtccaggactcggcagaggag
agccaggctgtagaagggaaatcaggggacgaagtcccacaaaatcttcctgattctcag
gaagtccccagctctaccgctgcaccctccaaggaggatgaggacagtgggagagggagg
aagaaggaaaaggagctgaggaagggccgcagccatagtaacagctcctcttcttcctcc
tctggctcatcctccagcggaagttcctcttcttcctccggatccagccgctcctcttca
tcatcctcctcctcttcatcctcatcatccaacagcagcagccgaagtcgcagccgagac
agcggtaagcgcaagaggccgttggacaaaggcagggacaggaagaaagaagaacaaagt
cacagcaagagaggagggaatatcggaggagggagggactcgaagggctccaaggaaagc
aggaagaggaggagcgaggaagggagggccaggtcatcccggagcgatagggagcataga
gacaggaaggacaagaggcgctaa
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