Monopterus albus (swamp eel): 109973034
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Entry
109973034 CDS
T05607
Symbol
cnot4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109973034 (cnot4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
malb03000
]
109973034 (cnot4)
03019 Messenger RNA biogenesis [BR:
malb03019
]
109973034 (cnot4)
04121 Ubiquitin system [BR:
malb04121
]
109973034 (cnot4)
Enzymes [BR:
malb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109973034 (cnot4)
Transcription factors [BR:
malb03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109973034 (cnot4)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109973034 (cnot4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109973034 (cnot4)
Ubiquitin system [BR:
malb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109973034 (cnot4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
Med7
zf-CCCH_2
zf-C3HC4
RDD1
Rtf2
Torus
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
109973034
NCBI-ProteinID:
XP_020477989
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MSHSPEMKDDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGRFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKINPSFLQPPACGTEKLKSKPSSTQRTNNSNGKDGWPTLSGHNKLVNGLSEDRKS
PPLLDYLDQDVITSDGLDTELGPSQCTALSPFSSNCDSNSPSDKPPESVGMVNGESLQQM
PTSDSPSPPPGLTKPNLVVPITVSDLTARSPFEGAAAESQSLFSDNSNFRHPNPLPAGLP
PFPSSPRGSSDWPMTPEPQSLFTSDTIPVSSSTDWQAAFGFGSSSKQQDDDLGFDPFDVT
RKALADLIEKELSVQDQSPSSPGPLPQGSNHGLSLPPLNPNPSTSHHFPSSLPRLPQLHH
RAIYSSFSFPGSQNSQAGQQQPAARHPWMGVPTRNNLIHLNHSASAASHSNFLDLNLPPQ
HNTGLGGIPISENSGSIDGLNMKEWQDGLRALLPNININFGGLPNSSSSSSSSSSNSVNH
IGGPAGISHSLSWDGTASWMDPAIITGIPASTGSSLDCLQDDNPPHWLKSLQALTEMDGP
ASSAMPTPQPLHSGLLDTQLPPHPRAMAAAPQRFYFCPDILSQRCASKWRRLVLCLALAR
FRRLLVLCFARFRRRLVLCVACFRRHLVLCVARFGERLVLCLTLTIDLCTVLFGAETQTR
PDLMRPPSAVGSTVNCTYLQQQLNEPFFWS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagccctgaaatgaaggacgaccccatggagtgccctctgtgcatggaacca
ttggaaattgatgacgtcaacttcttcccttgcacctgtggctaccaaatctgccgcttc
tgttggcatcgcatccgcacagacgagaatggcctctgccccgcctgcagaaagccgtat
ccagaggatccggctgtgtacaagcctttgtcgcaagaggagatccaaaggataaagaat
gaaaagaagcagaaacagaatgagaagaaacagaaggttacagaaaatcgcaagcatctg
gccagcgtcagagtggtccagagaaatctggtgtttgtggtggggctatcacagcgactc
gccgacccagaggtcttaaagcgaccagagtattttgggaggttcggtaaaatccataaa
gtggtcatcaacaatagcacatcttatgcaggttcacaggggcctagcgccagcgcttat
gtcacttacatccgctctgaagatgctctaagagcaatacagtgtgtgaacaatgtggtt
gttgatggcagaacactcaaggcttctttaggcacaactaagtactgcagttacttcctt
aaaagtatgcagtgtcccaagcctgattgtatgtatctacatgagttgggggatgaagca
gctagctttactaaagaggagatgcaggcggggaaacatcaagagtatgagcaaaaactc
cttcaagacctctataaaattaaccctagctttctacaacctccagcatgtggaacagag
aagttaaagagtaaacccagttccacacagagaaccaacaatagcaatggtaaagatggg
tggccaacgctttcagggcataacaaactggtcaatgggctttcagaggaccgcaagtcc
cctccgctgctagactatctagaccaagacgttataacttcagatgggctagatacagag
ctgggccctagtcagtgcactgccctgtcccccttctcctccaactgtgacagtaacagt
cccagcgacaaacctccagagtcagttggtatggtgaatggagagtctttacaacagatg
cccaccagtgactccccttcccctcccccaggtttaactaagcccaacctggtggtgccc
atcaccgtgtcagacctcacagctcgttcgcccttcgagggtgctgcagctgagtcgcag
tctctcttttcagacaacagtaacttcagacatcctaaccctctcccagctggcctgccc
cccttccccagctccccccgcggcagttctgactggcccatgacccctgaaccacagagc
ctcttcacatcagacacaataccagtgtcttcttccacagactggcaggcggcctttggc
tttggctcgtccagcaaacaacaggacgatgacctgggctttgatccttttgacgtcacc
cgcaaggctttggctgacctgatagagaaggaactgtcggtgcaagatcagagcccctcc
tccccagggcccctccctcaagggagcaaccatggcctcagcctgccacccctcaaccct
aaccccagcacttctcaccacttccccagtagcctgccacgtctccctcagctccaccac
agagccatctacagctccttcagtttccctggaagtcagaacagccaagccggtcagcag
cagccagctgccagacacccctggatgggcgtccccacaagaaataacctcatacacttg
aaccactcagccagtgctgcctcacacagtaatttcctggacctgaatctgccccctcag
cacaacacagggctgggaggcatccccatctcagaaaacagtggctctatagatggctta
aatatgaaagagtggcaggatggcctgagagctctcctgccaaacataaacatcaacttc
gggggtctcccaaactcctcctcgtcttcatcctcctcatcctccaacagtgttaaccac
attggtggaccagcaggcatttcacacagcctgagctgggatggcacagccagttggatg
gatcctgctatcatcacaggcatcccggcctcaacaggcagcagtttagactgtctccag
gatgacaacccgccacactggctcaagtccctacaggcactcacagaaatggatggccca
gccagctcagcaatgcctactccccagcccctccacagtggcctactggacacccaactt
cccccccaccccagagccatggccgccgcgccacaacgattttatttttgtcctgatatt
ctcagtcaacgttgcgcgtccaaatggaggcgcctggtgctgtgcttggccttggcgcgt
tttaggaggctcctggtgctgtgctttgcgcgttttaggaggcgcctggtgctgtgtgtg
gcgtgttttaggaggcacctggtgctgtgtgtggcgcgctttggggagcgcctggtgctg
tgtttgaccctgactatagacctgtgcaccgtactgtttggtgctgagactcagactcga
cctgacctgatgagacccccctcagctgtgggaagcacagtcaactgcacttacctccaa
cagcagttgaatgaacctttcttctggagttaa
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