Monopterus albus (swamp eel): 109973132
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Entry
109973132 CDS
T05607
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109973132 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109973132 (prpf4)
Spliceosome [BR:
malb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109973132 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
PRP4
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Ge1_WD40
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
WD40_like
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109973132
NCBI-ProteinID:
XP_020478142
UniProt:
A0A3Q3JSB9
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSDEEDAAPAVKRTRIFYGSLEEKERERLSSEMVSSVAAGGDAVKAGVEAGNINISSGET
LEMEERVSERQQEALAEFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRER
LRSVLSVVGPDALKKSRKDEERAKRSQDECQQTWYHEGSASLKDARLWLAKYSLPRAMRR
LEAARSQRDVAEATRTIRQQELHKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWS
GLCKLWSVPDCNLIRTLRGHNTNVGAVVFRPQVGLSLDQSDVSLASCAADGSVKLWNLES
DEPVADIEGHSERVSRVSWHPSGRFLGTTCYDNSWRLWDLEVQEEILHQEGHSKGVHDLH
FHPDGSLAATGGLDAFGRVWDLRTGRCVVFLEGHLKEIYSLHFSPNGYHLATGSGDNTCK
VWELRNRKCLYTVPAHQNLLSAVRFQPTDGHFLLTGAYDNTAKVWSHPGWTPLKTLAGHE
GKVMGVDVSPDGKLIATCSYDRTFKLWLSE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgaggaggatgcggctccggccgtgaagaggactcgtattttctatgggagc
ttggaggagaaagagcgggagcgcctgagctctgagatggtgagcagtgtggcagcagga
ggtgatgcggtgaaggcgggggttgaggccggaaacatcaacatctcatcaggagagact
ctggagatggaggagcgggtcagcgagcggcagcaagaagcgctcgctgagtttgagcga
cggcggcgagcgcggcagatcaccgtctccactgatgatgcagaggtgaaggctggcctc
cgggcgctgggagagcccatcacgttattcggagagggaccagctgatcgccgggagaga
cttcgaagtgtcctgtcagtggtcggtcctgatgctctgaagaaatccaggaaagatgaa
gagagagccaagaggtcacaggatgagtgccagcagacatggtatcacgaaggctccgcc
tccctgaaggatgcccggctctggttggccaaatactctctgccacgggcaatgaggcgt
ctggaggctgcacgttctcagagggatgttgccgaggcaaccaggacgatccggcaacaa
gagctgcacaagagcctgaggaacctgaacaacttctgcagccagattggggatgatcga
ccaatcagcttctgccacttcagccctgactctaaaatgctggccacggcctcctggagt
ggtctgtgtaagctgtggtccgtccccgactgcaacctgattcgtacactgagaggacac
aacaccaatgtgggcgcggttgtgttccgcccacaggtcggtctctctctcgaccagtca
gatgtcagtttggcgtcgtgtgctgccgacgggtctgtcaagttatggaacctagagagt
gatgaaccagtggcggacattgagggtcacagtgagcgtgtgtcccgggtgtcatggcat
ccttctgggaggttcctgggaacaacttgttacgataactcatggcgtctgtgggacctg
gaggttcaggaggaaatcctccatcaggaaggtcacagtaaaggagtccatgacctgcac
tttcaccctgatggatccctggctgctactgggggactggatgcgtttggcagggtatgg
gacctgcggacgggacgttgcgttgtcttcctggagggacacctcaaggagatttacagc
ctacacttctcccccaatgggtatcacctggcaacaggaagtggtgataacacctgcaag
gtttgggagctgcgaaacaggaaatgtctgtacacagtccctgcccaccagaacctgctg
tcggctgtccgcttccaacccacagatggtcacttcctgttgaccggagcatatgataac
acagcaaaggtttggagtcaccccggttggacaccactgaagacgcttgctggacatgag
gggaaggtgatgggtgtggatgtgtcacctgacgggaaactgattgccacctgctcctat
gaccgaaccttcaagctctggttgtctgagtga
DBGET
integrated database retrieval system
