Monopterus albus (swamp eel): 109973304
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Entry
109973304 CDS
T05607
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03440
Homologous recombination
malb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109973304 (palb2)
03460 Fanconi anemia pathway
109973304 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malb03400
]
109973304 (palb2)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109973304 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
109973304 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
109973304
NCBI-ProteinID:
XP_020478446
UniProt:
A0A3Q3KE28
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MTASQSQPDLQAIINSQLSMKQRRRSRGHSRGRGLNRNTHSSDCSAQHTQTYSSSQNPAS
VDPHKLSHMQAAGASSEPSGNNQSSSEISEHACPSQTNTDAFSSPTVCATRPGRGRRRKR
GRGRGRPQIPRSSLNLDLGHTSDCSQATSTLVSSSPSLRVAHGSKPSLVSQEDVPVTHKP
EPAPVYITATQPSSGINGAQDNSGSGHLEKVCPIFVKSSTETKRSSQRSIGTASWQSLLL
PSSPAQTSLCPLRFQPPGLLVSNLRNLDIHQDFYLPDDQFALLKLLKLRQITVELGVEQF
TSPSYNTRSSTRRSNICWTSSNDALIPFPLLLSLTPTDFTVEKPSTTQSAGVQNLFIDDK
HASQSLVEGTSDQDTTETPGGQQTENLQAKTLTSSAESVSLVEDCAADCVSQYKEHETVT
LNSHNESGLSASSTHTSVDHPVKACLNFVDRPAGKVNDSVTGQSDYLKIKQPALEKQPDC
ADVVHPLENLREHNTVIIDCPLEQTPDEPSNSYNVKSPAKDSKGPCKPTHSPPIDKSAEN
KTQEKCVLHHIVPSQLLLSPPVASAPCPFLTPHLLSSALPSSPTLPSLGVTPVTPATSSS
TSPRCTLPPAHSPSTQALSPQALSPCPSFMPLPTSQPPDSPSSQNQASLQPPDITDQCYR
VQMATCPTVSSIQAQGSGRLLGPRTEETTKKHMLRCIHTLKAPAGDCLVDACCLAGHSGG
LYVAAAGKWAVCLWSQVSANDWSLIHSWSFNKPVINVFPVPDAAGLLCVTLGQLEISEVR
MLSCSSFLQVLLYEGGVQAVVSVSKSRVVTSSHSAIGSTMKVFYLSDSNSMPGSQPLVSP
GVCIGALAPVEELFDALIGTDECGHLFIWNLKTGQLLQKIILGDDLSHTACLRGYSYCGV
LFVLLQHQFLSSLEEEETEAKAKDEMFSDEGKEEERKKTALFSLVTVNPLSGKSVLATQL
SPPKAWSGSRLYEADVNSSSVVGLSQSGCMCVWELGRQGASEMVRAPESEGWQLARWGVR
DVLLTGHHNGDVSLHCYSTCQASLCN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttcacagagtcagcctgacctgcaggccatcataaactctcagctgagcatg
aagcaacgtcgcaggagccgaggccacagtcgcggcagaggtttgaatagaaacacccac
agcagtgattgttcagctcaacacactcagacatattcatcatctcagaaccctgcatct
gtagatcctcacaaattgtcacatatgcaggctgctggtgcatcttctgagccgtcgggc
aacaatcaaagctccagtgagatttcagaacatgcctgtcctagtcagaccaatacagat
gccttttcatcccctacagtctgtgctactcgtccggggagaggcaggaggaggaagaga
ggtagaggcagagggagacctcagatcccacgatcctctttaaatttagacctcggacac
acttcagattgttcccaggctaccagcaccctggtctcttcctccccatctctccgtgta
gctcatggatcaaagccctctctggtttcacaggaggatgttccagtgacacacaagcct
gagcctgcacctgtgtacatcacagctacccagccttcctctgggattaatggggctcag
gacaactctggatctggccatctggagaaggtctgtcccatctttgtgaagagcagtact
gagactaaaagatcctcccagagaagcataggcacagcgagttggcagtctctcctcttg
ccctcctctcctgcccagacttctctttgtcctctcagatttcagccccctggcctactg
gtcagcaacctaaggaacttggacatccaccaagatttctatcttcctgatgaccagttt
gctttgctgaaactgctgaaacttcgccaaatcactgtggaattaggagtagaacagttc
acatcaccgtcttacaacacgcgcagcagcacccgccgctctaacatatgctggaccagc
agcaacgatgctttgataccatttcctctactgctcagcctcacacccacagatttcact
gtagaaaaaccatctactacacaatctgcaggtgtccagaacttgtttatagatgacaag
catgcaagtcagtcattagttgaagggacatctgaccaagataccacagaaacccctgga
gggcagcagactgaaaacctccaagcaaagactctcaccagctcagcagaatctgtgtca
ttggttgaagattgtgctgccgattgtgtcagtcaatataaagagcatgaaactgtgact
ttgaacagtcataacgagagtggcctctcagcaagcagcacacacacatctgtagaccat
cccgttaaagcttgtttgaactttgtagacagaccagcaggcaaagtgaatgattctgtc
actggacagtcagattaccttaaaataaaacagcctgcattagaaaaacaaccagactgt
gctgatgttgtccatcctttggaaaatctgagagagcacaacactgtcatcattgattgc
cctctagagcaaacacctgatgaaccttctaacagctacaatgtgaaatctcctgccaaa
gattcaaagggaccttgcaaacccacccacagcccccccatagacaaatcagcagaaaac
aaaactcaggagaagtgtgttctacaccacattgtcccctctcagctcctgttgagccct
cctgtggcttcagcaccctgccccttcctaaccccacacctgctctcctctgctctcccc
tccagccctacactaccctccctaggagtcacgcctgttacccccgcgacttcctcctcc
acttcgcctcgttgcaccctgcctcctgcacacagtccatccacccaggccctctcccct
caggctctctctccctgtccatcctttatgcccctgcctactagccagcctcctgactcc
ccctccagtcagaaccaggcttcattacagccaccagatataactgatcagtgttacagg
gttcaaatggctacttgtccgactgtctccagcatccaggcgcagggctctggtaggttg
ttagggccaagaacggaagagactacaaagaaacacatgctgagatgcatacacacgtta
aaggccccagcaggagactgtctggtggatgcatgctgtctggccggacactcaggtggt
ttatatgtagcagcagcgggaaaatgggccgtgtgtctgtggagtcaggtttcagcaaac
gattggagcttaatacacagctggagcttcaacaagccagtgatcaatgtgtttcctgtc
ccagatgctgctgggctgctttgtgtgactctgggacagctggaaatcagtgaagtgagg
atgctgtcatgctccagcttcttgcaagtgttgctatatgaagggggcgtccaggctgtt
gtaagtgtgtccaagtccagagtggttacctcctcccactcagcaataggttccaccatg
aaggtgttttacctgtctgacagcaacagcatgccaggctctcagcctcttgtgtctcct
ggtgtttgcatcggggccctcgctccagtggaagaactttttgacgctttgatcggtaca
gatgagtgtggacacctcttcatctggaatttgaagactggacagctgctgcagaagatc
atcctcggagatgacttatcacacacggcctgcctcagaggatactcctactgtggagtg
ttatttgtcctgctgcagcaccagttcctcagctctctggaagaagaagagacagaggcc
aaagcaaaagatgaaatgttttcagacgaagggaaggaagaggagaggaagaagacggcc
ttgttttccctggtgactgtcaacccgctgagtgggaagtctgtcctggctacccagctg
tctccacccaaagcctggtctggcagcagactgtacgaggccgatgttaacagctccagc
gtggtcggtctgagtcagagcggctgtatgtgtgtgtgggagcttgggcgtcagggggcc
tcggaaatggtgagggctcctgagagcgaaggctggcagcttgctcgctggggcgtgcga
gatgtgctgttgactggccatcacaacggagacgtttctctgcactgctacagtacgtgt
caggcctcactgtgcaactga
DBGET
integrated database retrieval system