Monopterus albus (swamp eel): 109973565
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Entry
109973565 CDS
T05607
Symbol
ercc2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03022
Basal transcription factors
malb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109973565 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
109973565 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malb03021
]
109973565 (ercc2)
03036 Chromosome and associated proteins [BR:
malb03036
]
109973565 (ercc2)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109973565 (ercc2)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109973565 (ercc2)
Transcription machinery [BR:
malb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109973565 (ercc2)
Chromosome and associated proteins [BR:
malb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109973565 (ercc2)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109973565 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
UxuA
DUF8741
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
109973565
NCBI-ProteinID:
XP_020478909
UniProt:
A0A3Q3J5G8
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLEASKLIYCSRTVPEIEKVVEELRKLMEFYSKETGENNNFLALALSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYIRAQRHSNPNLAVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRMLDRCHNNVDTLQNTIHKIKETDAAKLKEEYRRLVEGLKEANVARE
TDIYLANPVLPDEILQEAVPGTIRTAEHFVGFLRRFLEYLKSRLRVQHVVQESAAQFLKD
IFEKVCIDRKPLRFCSERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTIAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGMPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRVIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHISDSSLNLTVDEAIQLSKHF
LRQMAQPFRREDQLGLSLLTLKQLESEEMLQKITQIAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgagggcctgttggtgtattttccctatgactacatctaccctgag
cagtactcctacatgctggagctgaagaggacgctggacgccaagggtcatggagtcctg
gagatgccatctggaacaggaaagaccatctctctgctgtctctcattgttgcctaccaa
cgggcctttcctttggaagcaagcaagttaatatactgctccagaaccgtccccgagatt
gagaaggtcgtggaggagctgaggaagctgatggagttttattccaaggaaactggggag
aacaacaacttcttggctctggccctgtcctccagaaaaaacctgtgcatccaccctgag
gtgagctctctacgcttcggtaaagaggtcgatgggaagtgccacagtctgacagcatca
tacattcgtgcacagcgccacagcaaccccaacctggccgtgtgccgcttctatgaggag
tttgatgccgtcggccgacaggtgcctcttcctgctggcatctacaacctggatgatctg
aaggactttggcaggaggaaaggctggtgtccatactacctggctcgctactcgatcctg
cacgcaaacatcgtggtgtacagctaccactacctgctggaccccaagatagccgacctg
gtgtccaaagagctggccaagaagtctgtggtcgtgtttgatgaggctcataatatagac
aacgtgtgtatcgactccatgagtgtgaacatcaccaggcggatgctggaccgctgccac
aacaatgtggacacactccagaacaccatacacaagataaaggagacagacgctgcaaag
ctgaaggaggagtacaggcgattggtggaggggctgaaggaagccaatgttgccagggaa
acggacatctaccttgcaaatccagtgttaccggatgaaattcttcaagaggcggtcccc
ggtactattcgcacagccgagcactttgttggtttcttgaggcgtttcctggagtatctg
aagtcccgtctgagggtccagcacgtggtacaggagagcgccgcacagttcctcaaggac
atcttcgagaaagtctgcatcgaccgcaagcctctcaggttttgttcagagcggttgcag
tcgctactacggactctggagatcgccgacattgcagacttctccgctgttacactcatc
tctaattttgctacactggtcagcacctacagccaaggtttcaccatcatcattgagccc
tttgaagacagaactccgaccatcgccaaccctgtgttgcacttcagctgtatggacccg
tcaatagccatcaaacctgttttccaaagatttcagtcagtcatcatcacctcggggaca
ctctcgccactggacatctaccccagaatcctcgacttccgccctgtgaccatagcgtcg
ttcaccatgacgctggctcggacctgcctctgtcccctgattgttggcaggggaaacgat
caggtggccctgagctccaagtttgagaccagagaagacttcgctgtgattcgtaactat
ggtaacctgcttctggagatgtctgccatcgttcctgatggcatcgtggcatttttcacc
agctacgtctacatggagaacatcgtggcgtcttggtatgaacagggcatcctggagaat
atccagagaaacaagttgatcttcattgagactcaggatgctgcggagacgagcatggcc
ctggagaagtaccaggaggcgtgtgagaatggcagaggagccatcctcctgtccgtggcc
aggggaaaggtgtctgaagggatcgactttgtgcatcatttcggccgggcggtcatcatg
tttggcatgccttacgtctacacccagagccgcatcctgaaggcccgtctggagtacctt
cgggaccagtttcagatcagagagaacgacttcctgacgttcgacgccatgcgtcatgca
gcccagtgtgtgggcagagtcatcagaggcaagaccgactacgggctcatgatctttgct
gacaagcgttatgcccgtgcagacaaacgcgggaagctgcctcgctggattcaggaacac
atcagtgacagcagcctgaacctcactgtggacgaggccatccagctctccaagcacttc
ctgcggcagatggctcagcccttcagacgggaggaccagctgggtctgtctctgttgact
ctcaagcagctggaatcggaggagatgctgcagaaaatcactcagattgctcatcagact
tga
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