Monopterus albus (swamp eel): 109973982
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Entry
109973982 CDS
T05607
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109973982 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109973982 (smg7)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109973982 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
109973982 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
109973982
NCBI-ProteinID:
XP_020479579
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MNLCTQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSSTSAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLSKSLDKLDGLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTADGSEQSYSSEQQISWFQLLGLFMSFLGVMCSRVLLNKNHGEEIMGECP
LPAIKVSLDWLRLRPSVFHEAAVEQRQYIWPWLVSILNSFQPKEDDVSCSSVTPLPEEFE
LQGFLALRPALRSLDFTKGHQGILVDRDGLPLHARHQRLAVLGKWVADNQPGLIQCRVSE
DGLLVFITDIPEQAIEEPQGKEAPVLQESSNGEQTPNDGSNSGLKSVLSVGKTQSSWPDG
SDRPVVTFKENIKPREQNREPTWNHLQKEGKERRDFTKGNGAAGKGELKRDGKRKSEPKK
SAHEKSPDAGKQVKAQTELRKTPVSEAKKTPVTQTQTTCSSQFIPIHHPGAFPPLPSRAG
FTPSAYVIPPPVAFPGLQVNPGFTFSTGVSVPGPFLQSAVHTQAGTQVQTGKQSHIPYSQ
QRPSGPGPGQGPGSSGQGPSQGQQPQSLQQSVQLQVQAMSQQQQSPTKPVQQVGMGKSPP
HHPGMQQQFVQVQDQPSQMWSQAQAALQKMAPLQLSMKQPQQQQQTFYMAAQEPLKLYEH
QLQPPSQPQLSTMDKKIKYPDVKVQDFYWEPSYRMGDGLAVMADRMKRPPPGSICSEQDA
SAGPRGPPFEDNKSSPLLPPDLLKTLADFEEEEELVFTKPSDFFQALTGTLSAAPGPNIF
LPNQTRMESGPEVVSPSSSLLPISGFPMQEYNQNSIFSQAYGRNLAPSSKPDTPILHQEP
SLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHSHGAMPFSNFGPIGTP
DSRDRRVVDRWKADKPGEGMRVTWTSQIHLNRLSRNKRVVSGFGLDYLPAAASSAASDTS
WHQSGPTGCSWTNQESPMEESSSTVLLDSFKSIWSSSMMQPGPSALEQLLLQQKQKQQRG
HGTMNPPH
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcactcagtacttacgacaggcagaggccctgaaggctgacatgacagat
tcgaagctgggggcggctgaggtgtggacgtctcgccaggcccttcaggacctctaccag
aagatgctggtgactgacctggagtacgctctggacaagaaggtggaacaagacctgtgg
aatcatgcttttaagaaccagatcaccacactacagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaggctaacctttcgctgtttctggaggcagcaagtggcttc
tacacccagttactgcaggagctgtgcaccgtgttcaacgtggatctgccatgccgtgtc
aaatcatctcagcttggcatcatcagcaataaacagagcagcaccagcgccatcgtcacc
ccgcagcccagctcctgctcctatatctgccagcactgcctcgtccacctcggagacata
gcacggtatcgtaaccagaccagccaggcagagtcttattaccgacacgcagctcagctg
gttccatcaaacggtcagccatacaaccagctggccatcctggcctcatctaaaggggac
cacctcaccaccatcttctactactgtcgcagcattgcagtcaagttccccttcccagca
gcctccactaacctgcagaaggcgctgtccaaggctctggagagccgcgatgaggtgaaa
accaagtggagcgtgtcggatttcatcaaggccttcatcaagtttcatggccatgtctat
ctgagtaagagtctggacaagctggacggtctgagagagaagctcgaggagcagtttcag
aggctcatcctgcagaaagccttcagctctcagcagctggtccacatcaccgttatcaac
ctgtttgagctccaccacctcagagacctgacagctgatggcagtgagcagagctacagc
agcgagcagcagatcagctggttccagctgctcggcctcttcatgtcattcttgggcgtc
atgtgcagccgtgttttgctcaataagaaccatggggaggagatcatgggggagtgtcca
ctgccggccatcaaagtgtctctggactggctccgactgagacccagtgtctttcacgag
gccgctgttgaacagaggcagtatatttggccctggctcgtctccatcctcaacagtttc
cagcccaaagaggatgacgtgtcctgttcctcagtaacacccctgccagaggagtttgag
ctccagggtttcctggctctccggcccgctctgaggtctctggacttcactaaaggtcat
caggggatcctggtggaccgagacggtctgcctctccacgctcgacaccagagactcgcc
gtcctgggtaaatgggtggctgacaaccagccagggctgatccagtgcagagtgagcgag
gatggcctcctcgtcttcatcactgacattcctgagcaggccatcgaggagccacagggg
aaggaggcgccagtgctgcaggagtcctccaatggggaacagacacccaacgatggcagc
aactcaggccttaagtcggtgctgtctgtggggaagacacagagctcgtggcccgacggc
agcgaccggcccgttgtcaccttcaaggagaacatcaaaccccgggagcagaaccgcgaa
ccgacatggaaccatcttcagaaggaaggcaaggagcgcagagattttaccaaaggcaat
ggggctgctgggaaaggagagctgaagagggacgggaagaggaagagtgagccaaagaaa
agtgcgcatgagaaatctcctgatgcaggaaagcaggtcaaggcacagacggagctgagg
aagactcctgtgtctgaggcaaagaagactcctgtcactcaaactcaaaccacctgctcc
tcccagttcatccccatccatcatcctggagccttccccccactgcccagcagagctggt
ttcactccctctgcctatgtgatccctcctcctgtggcgtttcctgggctccaggtgaat
ccgggcttcaccttctccaccggagtatcagttcccgggcctttccttcagtcggctgtc
cacacccaggctggcacgcaggtccagactggtaagcagtcccacattccctacagtcag
cagaggccctctggtcccggtccaggtcagggaccagggtcgtctggccagggcccctcc
cagggccagcagccccagtccctgcagcagtcggtccaacttcaggtgcaggcaatgagt
caacagcagcagtctcccactaagccggtccagcaggtcgggatggggaagagtcctcct
caccacccggggatgcagcagcagtttgtgcaggtccaggatcagccatctcagatgtgg
agccaggcacaggcagccctgcagaagatggcccccctgcagctgtccatgaagcagcct
cagcagcagcagcagaccttctacatggcagctcaggagcctctcaaactgtatgagcac
cagctgcagccgccttcccagccacagctctccaccatggacaagaagatcaagtaccct
gatgtcaaggtgcaggacttctactgggagccctcgtacaggatgggggacggtctggct
gtgatggcagacaggatgaagaggcctccaccgggcagtatctgctcagagcaggatgcc
tctgctgggccccggggacccccatttgaggacaacaagagctcgcctcttctacctcct
gacctgttaaaaactctagcagattttgaggaggaggaggagctcgtctttactaagcct
tctgatttcttccaggccttgactggcactcttagcgctgctcctggaccaaacatattt
ctgcccaaccagaccagaatggagagcggccccgaggttgtcagcccgtcgtcttctctc
ctgcccatatctggcttccccatgcaggagtacaaccagaacagcatcttcagtcaggcc
tacggcaggaacctggcgcccagctccaagcccgacactcccattctgcaccaggagccc
tccctctactcccttttcgaagggactccttggtccccctccctccctgccagctcggac
cactccaccccagccagccagtcccctcactcctccaaccccagcagcctgccgtcctcc
ccccctacacacagccatggagccatgcccttctccaacttcgggcccattggtactccg
gacagccgggaccgcagggtggtggaccggtggaaggctgacaagcctggtgaggggatg
cgggtcacatggacatctcagatacatcttaacagactgagtagaaacaaaagagtggtg
agcgggttcggtctggactacctgccagcagctgcctcctctgcagcgtctgacaccagc
tggcaccagagcggaccgaccggctgctcctggaccaatcaggagtctccaatggaggag
tcgtcgtccaccgtgctgctcgacagcttcaagtccatctggtcgagctccatgatgcag
cccggcccgtctgcactggagcagctcctcctgcagcagaagcagaagcagcagcgaggt
catggcaccatgaacccgcctcactga
DBGET
integrated database retrieval system