Monopterus albus (swamp eel): 109974153
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Entry
109974153 CDS
T05607
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03030
DNA replication
malb03410
Base excision repair
malb03420
Nucleotide excision repair
malb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109974153 (rfc1)
03410 Base excision repair
109974153 (rfc1)
03420 Nucleotide excision repair
109974153 (rfc1)
03430 Mismatch repair
109974153 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malb03032
]
109974153 (rfc1)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109974153 (rfc1)
DNA replication proteins [BR:
malb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109974153 (rfc1)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109974153 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_30
AAA_17
RuvB_N
AAA_14
Rad17
AAA_7
BRCT_2
AAA_33
nSTAND3
RNA_helicase
AAA_16
AAA_18
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
109974153
NCBI-ProteinID:
XP_020479853
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MDIRRFFTPTSAKPAVQKPAPNGNFKAEKKKKNPPSSDEETKKKNKETTKVKTKGKHKES
EKKRKKHAIIESDSEEEEEPMRKSKNSPKEKQKTSKPAPPPKKDPVQYVSETDSDSDNFQ
SLKKASKAKRNGTSKLTRSDTESARTDAKAGAKSPIQPSTQGKAGEKPPSVPLTPKSAPP
PLPKQTPTSVLDYFGSTSVQRSDKKLVASTKRKAPIQDADDLISDEEIARQLQIEEDMEL
EKQVHEDEEFARTLAMLDDEPQAKKVRKGSDEKQSSAGFPKKGRTDSAAGSMSSPSKTNK
SSPSPKKIPGPAKASSKLALMKKKDDKRDEGPKSKTQILPTKMKISPRKDAPNLSSSDMK
FTPTKHITSPRKAESTTTSPDDPEKKKGNSSAYRNYLNRDGPRALGSKEIPKGAENCLEG
CVFVLTGVLESMERDDAKALIERYGGKVTGNVSKKTTYLIQGRDSGASKLEKAESLGTKI
LDEDGLLELIRTKPGKKSKYEIAAEAESKASKTRTPTGQTSKCTPKGQKISPSKGNSRSP
HTPSPSKTGLTQGISGGTKDGGTPLGKGSGLKARRELGLSSYAASSSAAGSSSPSATGED
ASLLWVDKYRPRSLKTVIGQQGDHSCANKLLCWLKNWHKHHSGGTSKPPAARFGKSGGKD
DGSGYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEAVAESLNNTSI
ENFYKGVSHTVSSKHVLIMDEIDGMAGNEDRGGIQEMISLIRSSKIPIICMCNDRNHLKI
RSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGIKIPPPALNEIILASHQDVRQVIHNLSM
WSAKNKVMTYDQCKSDAAGARKDMKLGPFDVCRKVFSSGEEAAHMSLIDKSDLFFHDYSL
APLFVQENYLHVRPAAAGKDVKSHLVLLSKTAESISDGDLVDRMIRSRQNWSLLPTQAIY
ASVLPGELMRGYMSQFPTFPSWLGKNSSTSKHSRIVQELASHMSLQTLSSRQAVNLDYLH
YLRQALLTPLQRHGAEGAGQAVQLLNDYRLIKEDVDSIMEVTVWGGQPDPYSKLDSKVKA
AFTRAYNKEVHLTPYSLQAVKKGRRGGGGESELGGDDMDQDVQESEDEGESLKTDAMIKQ
KKARATNETKKEKKDDSGKGKGKAKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggacattaggcggttctttacaccgacatcagccaagcctgcggtacagaaaccagcc
ccaaatggaaactttaaagccgagaagaagaagaagaaccctccctcctcagatgaggaa
acaaaaaagaaaaataaagagacaaccaaggtcaaaacaaaggggaaacacaaagagagt
gagaaaaaacgaaagaagcatgcaatcatagagtcagactcggaggaagaggaggagcca
atgagaaagtcaaagaattcccccaaagagaaacagaagaccagcaagccagcaccacct
cccaaaaaagatcctgtgcagtatgtctctgaaacagactcagacagtgacaactttcag
tccttgaagaaagcctccaaagccaagcggaacggcacatccaaactgacaaggtccgat
acagagagtgctcgtacagatgccaaagcaggggccaagtctcctatccagccctccaca
caggggaaagccggggagaaacctccttctgtgcccctcacacctaagtcagcccctcct
cctctgcccaaacaaacccccacctcagtgcttgactacttcggtagtacgtctgttcag
cgctcagacaagaagctggtagccagcaccaagcgaaaggctccaattcaggatgcagat
gatctgataagtgatgaggaaatcgccaggcagctgcagatagaagaggacatggagctt
gaaaaacaagttcatgaggatgaggagtttgcaagaacactggccatgctggacgacgag
ccccaggcaaagaaggttcggaaaggctctgatgaaaaacagtcctctgctggatttccc
aaaaagggacgcacagactcggctgctggcagcatgagcagtccctctaagaccaacaaa
agcagtccgtctcctaagaagatccccggtcctgccaaagccagctccaagctggccttg
atgaagaaaaaggatgataagagagatgaaggaccaaagagcaaaacacagattttaccc
acaaaaatgaaaatctcccccagaaaggatgcccccaatttgtcgagctctgatatgaaa
tttacgcccaccaagcatataacctctccccggaaagcagagagcacaactaccagtcct
gatgatccagagaagaagaaaggcaactcttcagcgtacaggaactacctcaacagagat
gggccacgagctctgggctccaaggaaatcccaaagggagcagagaactgtctggagggc
tgtgtgtttgtgttgacaggggtcctggagtcaatggagagagatgatgctaaagccctc
atcgagcgctatggaggcaaagtgacgggaaacgtcagcaaaaagaccacctacctgata
cagggcagagacagcggagcctcgaagctcgagaaggcagagagtttaggtaccaagatc
ctggatgaagatggtctgctggagctgatccgaaccaaaccaggaaagaagtccaagtat
gagattgctgcagaggcggagagcaaggcctcaaagaccaggactcccaccggccagact
tcaaagtgcaccccgaaaggccagaagatctctccctctaaaggtaattccaggtctcct
cacaccccaagtccatcaaagaccggtctgacgcaaggtattagtggtgggaccaaagat
ggtggcactcctcttggaaaaggctcaggtctcaaggcccggagagagctgggcctttcc
tcctatgctgcttcatcttcagccgcaggatcatcatctccatcagccactggagaggat
gctagtctgctatgggtggacaagtaccggccacgctcactgaagactgtgattggccag
cagggggaccacagctgtgccaataagctgctgtgctggctgaagaactggcacaaacac
cacagcggtggcacatccaagccaccagcagcaaggtttggtaagtctggaggaaaagat
gatggatcaggatacaaagctgccctactctctggacctccaggggttggaaagactacc
acagctgctctcgtctgtgaggagctgggcttcagctacgtggagatgaacgccagctgc
actcgcagcaaaaacagtctgaaggaagccgttgcagagtcgctcaacaacaccagcatc
gagaacttctataaaggtgtatctcacacagtgagcagtaaacatgtcctgattatggat
gagattgatggcatggctggcaacgaggaccgtggaggaatccaggagatgatcagcctg
atcagaagttcaaagattcccatcatctgcatgtgcaacgatcgtaaccacctgaagatc
aggtcactggcgaactactgcttcgacctgcgcttccagaggccacgagtggaacagatt
aagggagccatgatgtctatcgctttcaaggagggaatcaaaatcccacccccagctctt
aatgaaatcatcctagcttctcatcaggatgtccgacaggtgatccacaacctgagcatg
tggtccgccaaaaacaaggtgatgacgtatgaccagtgcaagtctgacgcagctggcgcc
cgcaaggacatgaagctggggccgtttgatgtttgcaggaaggtgttttccagtggggag
gaggccgcccacatgagccttatcgacaagtctgacctcttcttccacgactactcgcta
gcgccactctttgttcaagaaaactacctgcatgttcgtccagcggctgctggtaaagat
gtgaagtctcacctggtgctgcttagtaagacagcagagtccatctctgacggagacctg
gtggacagaatgatccgctctaggcagaactggtcactactgcccacccaggccatctat
gccagcgtgttaccaggtgagctcatgagaggctacatgagtcaattccccacattcccc
agctggctcggcaagaactcctccaccagtaaacattcccgtatcgtccaggagctggcc
tcacacatgagtttacagacactgagtagcagacaggcagtgaacctcgattacctgcac
tacctgcggcaggcactgctgaccccgcttcagaggcacggagcagagggcgccggacaa
gctgtgcagctgctcaatgactaccggctcatcaaggaggatgtggacagcatcatggag
gtcactgtctggggcggacagcctgacccctactctaaactggactcgaaggtgaaggca
gctttcactcgggcgtacaacaaagaagttcacctgacaccgtactccctgcaagctgtg
aagaaaggccgacgcggtggtggtggagaatcggagctgggaggggacgacatggaccaa
gatgttcaagagtctgaggacgagggggagagcctcaaaacagacgccatgatcaaacag
aaaaaagccagagccaccaacgagacaaagaaggagaagaaagatgactcggggaagggc
aagggcaaggctaagaaatga
DBGET
integrated database retrieval system