Monopterus albus (swamp eel): 109974262
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Entry
109974262 CDS
T05607
Symbol
col25a1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
malb
Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
malb00536
]
109974262 (col25a1)
Glycosaminoglycan binding proteins [BR:
malb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109974262 (col25a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109974262
NCBI-ProteinID:
XP_020480027
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MEKEVAPQKRQCCRTTVLNVISSLCSLASIAFCILLSINTADIKSRVVNLESGNGEHTLI
PAPGYSMDDFNSLIQQRVDELLSQHSYEKIKIRTARQASPECNCPPGPPGKRGRRGRDGE
TGPPGPPGLKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGP
PGPPGPRGPPGDTGKDGPRGVAGLPGDAGQPGEVGPMGPEGPPGTKGSLGPPGVAGADGL
KGDVGIPGLDGIPGAKGEMGERGEKGDMGEEGPKGDMGEKGDAGSSAAGIKGEPGEPGRS
GQKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGEKGDHGPPGKGERGDIGPVG
PKGSQGEAGAPGLKGSKGETGDKGDLGFVGPKGPPGQKGDQGATEIIDYNGNIQEALQKI
TTITVTGPPGPPGPVGPQGIKGDRGMPGLPGLDGERGYKGSKGDMGMPGISGDKGATGLP
GLPGVNGVRGDKGDPGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGFPGAKGEPGLHGVKG
MRGEPGHKGDRGPLGLPGASGLDGKPGPRGMDGPPGPAGPAGPKGDIGERGAPGEPGPRG
PYGLPGAAGTPGLDGLPGLRGEKGDVGERGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCP
LGPDGLPMPGCWQK
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagtggcgcctcagaagcgacagtgctgtcgcacaacagtgctgaacgtc
atctcgtctttatgttcactggcgtccatcgccttttgcattcttctcagcattaacacc
gctgatattaagagccgggttgtgaatttggagagtgggaatggggagcacaccttaatc
cctgcccccggctactccatggatgattttaattccctgattcaacaaagagtggacgag
ctgctctctcagcactcctatgagaaaattaagattcgcaccgccagacaagcatcacct
gaatgcaactgccctccaggacctccgggaaagcggggaagaagaggccgagatggagaa
actggacctcctggccctccaggtttgaagggtgaaaagggggatcaaggtgaccaggga
ccacggatggtcttccctaagatcaatcatggctttctttccgctgaccagcagctcata
aagcggcggctcattaagggagatcaaggccaagctggaccacctgggcctccagggccg
ccaggcccacctgggccgagggggccaccaggagacactggcaaggatgggcccagaggc
gtagccggtcttccaggggatgcagggcagcctggagaagtaggacccatggggcctgaa
gggccaccagggacaaagggttctctcgggcctcctggcgtcgcaggtgctgatgggctg
aagggggatgttggcatcccaggattggacggtatccccggagccaagggtgaaatggga
gagcgaggtgaaaagggcgatatgggtgaagaaggaccgaaaggtgatatgggagagaag
ggagacgcaggctcctctgcagctggcatcaagggtgaacccggagagcctggacgaagt
ggacaaaagggagagccaggacttccagggctgcctggactcccagggataaagggtgag
cctgggttcctcgggccccagggagagccagggcttcccggactcccagggactaagggt
gagaaaggcgaccatggtccaccaggaaaaggtgaacgaggagatatcggaccagttgga
ccaaagggttcacagggagaagctggtgcacctggtctgaaagggtcaaagggggagact
ggagataaaggagatttgggattcgtcgggccgaagggaccccctgggcagaaaggagac
caaggagccaccgaaatcattgactacaatggaaacattcaggaggctttacagaagatt
accactattacagtaacggggcctcctgggcctcccgggccagtgggacctcagggtata
aagggggatcgtgggatgcctggtctccctgggctcgatggtgaaagaggctacaaaggt
tcaaaaggagacatgggaatgcccggaatttcgggggacaaaggagcaactggtttgcct
ggtctacctggcgtcaatggtgtaagaggagataagggagatccaggtctgcctggtcct
caaggtccttcgattattggtcctcctgggccaccagggccccatggaccaccaggaccc
atgggaccgcatggcttccctggagcaaagggtgaacctgggttgcatggtgtgaagggt
atgcgaggggagccaggacacaaaggggaccgtgggcctttgggtcttcctggagcctcc
ggcttggacggcaagcccggacctaggggcatggacggacctccaggtccagctggtcca
gctggaccgaagggtgacataggtgagagaggagcacctggcgagccaggaccaagggga
ccttatggactacctggtgcggctggaacaccaggcttggacgggttgccaggcttaagg
ggagagaaaggcgacgttggggaaagaggagaaaagggggagaagggaaagaagggcaaa
aaagggcccaagggcgagaaaggagaacagggtgcccctggattagatgcaccctgccca
ttgggcccagatggattaccaatgccagggtgctggcagaagtga
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