Monopterus albus (swamp eel): 109974694
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Entry
109974694 CDS
T05607
Symbol
dhx16
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109974694 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109974694 (dhx16)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109974694 (dhx16)
Spliceosome [BR:
malb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109974694 (dhx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
nSTAND3
Flavi_DEAD
PWI
Motif
Other DBs
NCBI-GeneID:
109974694
NCBI-ProteinID:
XP_020480685
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDKYVSQFMIGTARKASSLQDFVSRLEQMGTIDIEQNVIAFA
QELFDKIPRKQVVEKPSRVIERQAIEMERKNQTYTLLEDSDSDGDAVREKQKGKKKSKDR
GNKRKHIRQKKKSESSSEDEVPKRADLGQPVKKEEEEEEEWENEERERLQDIEERDAFAE
RVRQKDKDKTRNIAERTDKKAYEEAQKRLKMAEDDQKNMKREAEKLEDLEAEIIDEEYLF
STDELSEREKKELEYKHTLWDLAKDYKKAGAKEHEERKNRYYMPEEKRSKEVPQRDLELE
ETPMELGGEQGRWEEERLKTASLSFGAKKEREQGMRQELEKYQLILEEDEMIDFVSTAIT
MKGTRTEKDQETPALSQAELKKQSMLEVRRSLPIFPYRDDLLAAIHEHQILIIEGETGSG
KTTQIPQYLLEDGYTEAGMKIGCTQPRRVAXMSVAARVAEEMSVKLGNEVGYSIRFEDCT
SERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLK
VLVASATLDTEHFSRFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQS
PGDILVFLTGQEEIEACCELLQERCRRLGSKIAELLVLPIYANLPSDMQAKIFNPTPPGA
RKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIVTPCSRASANQRAGRAG
RVAAGKCFRLYTAWAFQHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHE
TLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAML
SVNNSIFYRPKDKVVHADNTRMNFVVPGGDHLVLLNVYTQWLESGYSTQWCYENFIQFRS
MRRARDVREQLEGLMERIEVEVVSCQGDSVPIRKAVTAGYFYHTARLSKGGYKTVKHQQT
VYVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIESSWLLEVAPHYYKSKELEDSSNK
KMPRKQGKTKEELG
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctggagcagtgggtgaatgaccgcctccatgacatcctcgggttgagtgac
aaatacgtatctcagttcatgattggcactgcacggaaagcgtcaagtcttcaagacttc
gtgagccgtcttgagcagatgggcacgattgacattgaacagaatgtgattgcctttgct
caagagttgtttgataagattcctcgcaagcaggttgttgagaaaccatctcgggtgata
gaacggcaagccattgaaatggagaggaagaatcagacatacacgttactagaggacagc
gacagcgatggagatgcagtgagggagaagcagaaagggaaaaagaaaagcaaggacaga
ggaaacaagaggaagcacatcagacaaaagaaaaagagcgagtcttctagtgaggatgaa
gtacctaagagggctgatttgggccagcctgtcaagaaggaagaggaggaagaggaagag
tgggagaatgaagagagagagcgattacaggacattgaagagagagatgcatttgcagag
cgagtgaggcaaaaggacaaagacaagactcgcaacatagcagagaggactgacaaaaag
gcttatgaggaagctcagaagaggctgaagatggctgaagatgatcagaagaatatgaag
agagaggcagagaagctggaagacctggaggcagagatcattgatgaggagtaccttttc
tctacagatgagctgtctgagagggagaagaaggagctggaatacaaacacaccctttgg
gacctggctaaagattacaaaaaggctggtgccaaggaacatgaggagaggaagaacagg
tactatatgccagaggaaaagagaagcaaggaggtgcctcagagagacctggagctagag
gaaacacccatggagctgggaggagagcaaggccgctgggaggaggagagactgaagacg
gcctcacttagcttcggggccaagaaggagcgagaacaagggatgaggcaggagctggag
aaataccagctcatcctggaggaggatgagatgattgactttgtcagcactgccattacc
atgaagggaacccggacagaaaaggatcaggagaccccagctctgtcgcaggcagagctg
aagaagcagtccatgctggaggtccgacgcagtctgcccatcttcccttacagagacgac
ctgctagctgccatccatgagcaccagatactcatcattgagggggagacaggctctgga
aagaccactcagatcccacagtatctcctggaagatggctacactgaagcaggcatgaag
attggatgtacgcagcctcgcagagtggcanncatgtcagtggcagccagagtagcagag
gaaatgagtgtgaagcttggtaatgaggtgggttatagtattcgttttgaggactgcaca
tcagagagaacagtgctcaagtacatgacagatggcatgttgctccgagagtttctcact
gagcctgacctggccagctacagtgtgataatcatagatgaggcccacgagcgaactctc
cacacggacatcctgtttggtctgattaaggacatcgccaggttcagaccagacctgaag
gttctggtggccagcgccactctggatactgagcacttctcccggttcttcgacgacgca
cctgtcttcaggatccctggcaggaggttccctgtcgacatcttctacaccaaagctcca
gaggcagactacctcgaagcatgtgtggtgtcagtcctgcagattcatgtcacccagtca
ccaggagacatcctggtcttcctcactggccaggaggagatcgaagcatgttgcgagctg
ctccaggagagatgcaggcggcttggatctaaaatagcagagctgttggttcttcctata
tacgccaatctgccctctgacatgcaggcaaagatcttcaaccccactccacctggggct
cgtaaggtggttgtggctactaatatagcagaaacatcactgaccatagatggcatcatc
tacgtcattgacccaggcttctgcaaacagaagagttacaacgcccgcactgggatggag
tcactcatagtcactccctgctcacgggcttcagctaaccagagagcaggccgtgcaggc
agagtggctgctgggaaatgtttcaggctttacacagcctgggcctttcaacatgaaatg
gaggaaacgactgtccctgagattcagagaaccaacttgggaaatgtcgtcctgctgcta
aagagtctaggcatcaatgacctcattcactttgacttcatggacccacctcctcatgag
actctggtcctggcgctggagcagctctatgccctgggagcactcaaccatctaggagag
ctcaccaagcttggtcgcaggatggccgagctaccagtggaccccatgctgagcaagatg
atcctggcctcagaacagtacaagtgctcagaggaagtgttgacgatagcagccatgctg
tcggtaaacaactccattttctaccggcccaaagacaaggtggtgcacgctgataacaca
aggatgaactttgtggtgccagggggagaccacctggtgctgctcaacgtctacacacag
tggctggagagcggctactccacacagtggtgctatgagaatttcatccagttccgctcc
atgagaagagcccgggacgtcagagagcagctggagggtctgatggaacgcatagaggtg
gaggtggtcagctgccagggagacagtgtgcccatccgcaaggcagtgacagcaggatat
ttctatcacacagcacgactgagcaaaggtggctacaagacagtgaagcaccagcagacg
gtctacgtccaccccaacagctctctgttcgaggagcagccccgctggctcatctaccac
gagctggtcttcaccaccaaagagttcatgagacaggtgattgagatagagagcagctgg
ctgcttgaagtggctcctcactactacaagagcaaagagctggaggacagcagcaacaag
aagatgccccgcaagcagggcaaaacaaaagaggagctgggctga
DBGET
integrated database retrieval system
