KEGG   Monopterus albus (swamp eel): 109974819
Entry
109974819         CDS       T05607                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109974819 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:malb03021]
    109974819 (taf5l)
   03036 Chromosome and associated proteins [BR:malb03036]
    109974819 (taf5l)
Transcription machinery [BR:malb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109974819 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     109974819 (taf5l)
Chromosome and associated proteins [BR:malb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     109974819 (taf5l)
    STAGA complex
     109974819 (taf5l)
    TFTC complex
     109974819 (taf5l)
    SAGA complex
     109974819 (taf5l)
    SLIK complex
     109974819 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd WDR55 TFIID_NTD2 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP DSE1_N WDR90_beta-prop_4th PAC11 NBCH_WD40 ANAPC4_WD40 Beta-prop_Aladin CFAP251_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_NOL10_N RMC1_N Beta-prop_HPS5 Beta-prop_EIPR1 Tricorn_2nd Beta-prop_SPT8 Beta-prop_Vps41 ASA1 Beta-prop_DCAF4 Beta-prop_WDR19_1st PROPPIN PEP5_VPS11_N WD_LRWD1 WD40_like Nbas_N BCAS3_WD40 Beta-prop_IP5PC_F Tricorn_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 109974819
NCBI-ProteinID: XP_020480880
LinkDB
Position
Unknown
AA seq 595 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCPNIVSAA
PCQAEPLRILFISPTLETEISLAKEVRSILYPLFVYLHLDMVHCGLKGAVDGFYSRFHGA
FLQDSEQRATIEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQSEDNST
LCRVLSTHLQVEVTASRRTDYQLYGTTSGVSTAPNSTSSWAGVDSVEGGEGVEVPAGIPQ
SEVALEALQDCIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDSSTVKL
WSLRARKLKAKPHQADVSRIHLACDVLEEEVDEEDGSGSEIKTLRGHSGPVFRTSFLTDS
SGLLSCSEDTTVRYWDLGSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTARLWTFS
RTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWATQQGASVRLFTGHRGPVQSL
AFSPNGKYLASAGEDQRVKLWDLASGTLYKDLRGHTDSITSLSFSPDSSLVASSSMDNSV
RMWDIRNSHGGTPADGSSSELVGLYTGNTNSVLNVQFMACNLLLVTGSAQEKVEH
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgcactgagcagatccagtatgcagtggctcagtacctgaaaaggagg
cagtatgtggacaccgatggctccctaaaaggagccaaactcttccagtcagctgaggag
atggctgccagcctcacggtgcagacagagtcggggtgtcccaacatcgtctctgctgca
ccctgccaggccgaacctctcagaatactttttatttcccctacattagaaacagaaata
tccttggcaaaggaagtgcgcagcatcctctacccgctcttcgtctacctccacctggac
atggtgcactgtggcctcaagggggcagtcgatggtttctacagtcgtttccatggtgcc
tttcttcaggacagcgagcagcgtgccaccatagagcagctccgccatgttctcactgct
caggatgttgcagccaatcccaagctgagtgctttcttggagcacaagtacgtggttcac
ctgacggagccggcctacagctacctgctgcgctacctgcagagcgaggacaacagcacc
ctctgcagggtcctcagcacacacctgcaggtggaggtcaccgcctccaggcgtacagac
taccagctgtatggaaccactagtggggtgtccaccgccccaaactccacctcctcctgg
gcgggagtggattcagtagagggtggagagggggtggaggtccctgcagggatcccacag
agtgaggtggccctggaggcactgcaggactgcatcaagaaagtccgcgagggccccccc
tcgctcaccactgtgtgtttttacgccttccaccacacggagcagatgctgaacactgct
gaggtgtcggctgacagccggctgctcgctgccggctttgacagctccacggtgaagctg
tggagcctgcgagccagaaaactgaaggccaaaccgcatcaggccgacgtgtctcgcatc
cacctggcatgtgatgtcctggaggaggaagtggatgaggaggacggctccggcagtgag
ataaagacgctgcgaggtcacagcggcccggtgtttcgcacctccttcctcaccgacagc
tctggcctgctctcctgctctgaggacacgaccgtccgctactgggacctgggcagcttc
accaacacggcgctctaccagggccacgcctacccggtgtgggatgtggacgtcagcccg
tgcagcctttactttgccagtggctcccacgaccgcactgcccgactctggacgttctcc
cgcacctacccgctgcggctgtacgccgggcatctggccgatgttgactgtgtgaaattc
catccaaactccaactacctggccactggctccacagacaagactgtccggctgtgggcc
acccagcagggggcgtctgttcgcctcttcactggccaccgcggccctgtgcagtcgctc
gctttctcacctaatgggaagtacctggcatccgctggcgaggaccagcgggtgaagctg
tgggacttggcgtcagggaccttgtacaaagacctgcggggacacacagacagcatcact
agcctgtccttcagcccggacagcagcctggtggcatcatcgtctatggacaactcggtg
cggatgtgggacatccgcaactcacatggcgggacgccggctgatggttcgtccagcgag
ctggtgggactgtacactggaaacaccaacagcgtgctgaatgtccagttcatggcctgc
aacttgctgctggtgacaggaagtgcacaggagaaagtagaacactag

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