Marivivens sp. LCG002: QQG91_10795
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Entry
QQG91_10795 CDS
T10653
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
malc Marivivens sp. LCG002
Pathway
malc03030
DNA replication
malc03430
Mismatch repair
malc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
malc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQG91_10795 (dnaE)
03430 Mismatch repair
QQG91_10795 (dnaE)
03440 Homologous recombination
QQG91_10795 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malc03032
]
QQG91_10795 (dnaE)
03400 DNA repair and recombination proteins [BR:
malc03400
]
QQG91_10795 (dnaE)
Enzymes [BR:
malc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQG91_10795 (dnaE)
DNA replication proteins [BR:
malc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQG91_10795 (dnaE)
DNA repair and recombination proteins [BR:
malc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQG91_10795 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF3443
Motif
Other DBs
NCBI-ProteinID:
WIV50156
LinkDB
All DBs
Position
complement(2177180..2180683)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSDSARFIHLRVHTEYSLLEGAVRVKKLAGMAAAMNMPAVAVTDTNNMFCGLEFSEYAGK
DGVQPIVGCQIDLAYVAPEPGKRPEPPAPIVLLAQSEQGYMNLMKLNSALYLDQGGQLPH
VTLDDLKAHNAGLICLSGGPDGPVGRLLRMGQSVKAEALVRSLHDIYADRFYIELQRHPE
EGGLPEAERLSERGHIEMAYDMDIPLVATNDVYFPKPDIYEAHDALICIAQGAYVDQQEP
RRRLTPQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFKVYKRAPILPKFADDEVEELR
RQAWEGLDKRLSVIKAVADRKVYEERLQFELDIIEGMGFPGYFLIVADFIKWSKDNGIPV
GPGRGSGAGSLVAYVLTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREETIRYV
QEKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIEQALA
QEERLREEARNEEVVDRLLTYGMKIEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQSAMNLIFKSGRPLHVAADGRKLYEPAEGAE
NEINAIPLDDERTYKLYADAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKHGKRELESIHPTIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFIEGAKATHNVPEKKAGEVFDLLEKFANYGFNKSHAAAYAVVSY
QTAWLKANHPVEFMAGVMNCDIHLTDKLAVYFQEVKKGLGIDYIPPCVNRSLATFDVVDQ
KLVYALGALKNVGVEAMKLIVEARGDKPFVNLFDFARRADLKRVGKRPLEMLARAGAFDQ
LDSNRRRVFESLDALSGYSAAVHEQKSSNQVSLFGDAGDDLPEPRLPRCDDWLPAERLAE
EFKAIGFYLSGHPLDDYLPALKRKQVLTLDEVTAKAERGACIVKMAGTVSGRQERKSARG
NRFAFAQLSDPTGGYEVTIFSDTLEACRDFLETGAQVVLQVEATMESDQLKLLARSVSPI
DNVVADAGSTGLRIFVDEEEAIASVASVLESARRDKVRGGRGPIYFCLLRPDLPGEVELD
IGEEFPLNPQIKGAIKSLNGVIEVEEV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactctgccagatttatacacctccgcgtccataccgaatattcgcttctggaa
ggcgctgttcgcgtcaagaaactggcgggaatggcggctgcaatgaacatgcccgccgtt
gccgtgacggatacgaacaacatgttctgcgggctcgaattttcggaatatgcgggcaag
gatggtgttcaaccgatcgtcggctgtcagatcgatttggcctatgtcgcgcccgagccc
ggaaaacgccccgagccgcctgcgccgatcgttctcttggcgcagtccgagcaaggttac
atgaacctgatgaagctcaattccgcgctctatctggatcagggcggccagcttccgcat
gtgacactagatgacctaaaggcccataatgcgggattgatctgtctctccggtggtccg
gatggccctgtcgggcggctcttgcgcatggggcagagcgtcaaggccgaagctttggtc
aggtcgcttcacgacatctatgccgacaggttttatatcgagctacagcgccaccccgag
gaaggcggtcttcccgaagccgaacgattgagcgagcgcgggcatattgaaatggcctac
gacatggatatcccgctcgtggcgaccaatgatgtgtatttccccaagcccgacatctat
gaggcccacgacgcgcttatctgtatcgcccaaggcgcctatgtcgatcagcaagagccg
cgccgtcgtctcacgccgcaacactacttcaagagccaagaggaaatggttgcgcttttt
gccgatcttcctgaagcgattgaaaacacagtcgagattgcgaagcgctgcgcgttcaag
gtttataagcgtgcgccgatcctccccaaattcgccgacgacgaggtggaggaacttcgc
cgtcaggcttgggaaggtttggacaagcgcctttcggtgatcaaggcggttgcggaccgc
aaggtttacgaagaacggctccagttcgagcttgatatcatcgaaggcatggggttcccc
ggctacttcctgatcgttgccgactttatcaaatggtccaaggacaatggcattcccgtc
ggtccggggcgggggtcgggtgcaggttcactcgtcgcttatgtgctgacgatcaccgac
cttgatcctttgcgctactcgcttctcttcgaacgttttctcaatcccgaacgtgtttcg
atgccggacttcgacatcgacttttgcatggatcgtcgcgaagaaacgatccgctatgtg
caggaaaaatacggtcgcgacaaagtcgggcagatcatcacattcggcgcgcttttgtcc
aaagcggccgtccgcgacgttgggcgcgttctccagatgccatatggtcaggtcgaccgc
ctctccaagatgatccctgtcgaaggcgttaagcccgtctcgatcgaacaggctttggcg
caggaagagcgacttcgcgaagaggcccgcaacgaggaagtcgtagatcgacttttgacc
tatgggatgaagatcgaggggctcttgcgcaacgcctcgacccacgctgcaggcgtggtg
atcggagatcgtccgctcgacgagcttgtgccgctctatcaggatccgcgttcggatatg
cctgcgacccagttcaacatgaaatgggtcgagcaggcgggccttgtgaagttcgacttc
ctcgggctcaagacgttgacggtgatccagtcggcgatgaacctcattttcaaatcaggc
cgcccgcttcatgtcgcagcggacgggcgcaagctttacgagccggccgagggcgccgag
aacgagatcaacgcgatcccgctggatgacgagcgcacctataaactctatgccgacgca
aaaacggtcgctgtgtttcaggtggaatccacaggtatgatggatgcgctcaagcgcatg
aagccgacctgtatcgaggacatcgtggcgctcgtggcgctctatcgtcccggcccgatg
gaaaacatccccgtttactgtgaggtcaagcacggcaaacgggagctggaatcgatccac
ccgaccatcgaccatatccttgctgaaacgcagggcatcatcgtttatcaggaacaggtg
atgcagatcgcgcaggtcatggcgggctatagtcttggcggcgcggaccttttgcgccgc
gcgatgggtaagaagattgccgaagaaatggccaaggaacgccccaagttcatcgagggt
gccaaggccacgcacaacgtccccgaaaagaaagccggcgaggttttcgatcttctggag
aaattcgcgaactacggtttcaacaaatcgcacgcggctgcctatgcggtggtgtcctat
caaaccgcatggctcaaggcgaaccatcccgtcgaattcatggcgggggtgatgaactgc
gatatccacctgacggataagctcgccgtttatttccaagaggtgaaaaagggtctcggg
atcgattacatcccgccttgcgtcaaccgatcgctcgcgaccttcgatgtggtcgatcag
aaactggtctatgcgctgggcgcgctcaagaacgtgggcgtcgaggcgatgaagctgatc
gtggaagcgcgcggcgacaagcctttcgtgaacttgttcgatttcgcccgccgcgcggat
ttgaaacgtgtgggcaaacgaccgttggagatgctggcccgcgcaggggcctttgaccaa
ctcgacagcaatcggcgccgcgtattcgagagccttgatgcgctttcgggatattcggcg
gccgtgcatgaacaaaagtcgtccaatcaggtgtctctcttcggggatgcgggggatgat
ttgcccgagccgcgtttgccgcgctgtgacgactggctgcctgcggaacgtctggccgaa
gaattcaaggcgatcgggttctatctctcgggtcacccgctggacgactaccttcctgcg
ctgaaacgcaagcaggtgctgacccttgacgaagtgacggccaaggccgagcgcggtgcg
tgtatcgtcaaaatggcgggcacggtgtcgggacggcaggaacgcaagtctgcgcgagga
aaccgctttgcttttgcgcagctttccgacccgacaggtggttacgaggtgacgattttc
tcggatacgctcgaggcttgtcgcgattttctggagaccggtgcacaggtggtgcttcag
gtcgaagcgaccatggaaagcgatcagctcaagcttctggcgcggtctgtttcgccgatc
gataacgttgtcgccgatgcaggcagcacggggctaaggatattcgtcgacgaggaagag
gcgattgcttcggttgcttcagtcctcgagagtgcgcgccgtgacaaggtccgcgggggt
agggggccgatctatttctgcctgcttcggcccgatcttccgggtgaagtcgaattggat
atcggcgaggaatttccgctcaacccgcagatcaagggcgcgatcaagtcgctgaacggc
gtgatcgaggtcgaggaagtctaa
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