Marinovum algicola: MALG_00472
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Entry
MALG_00472 CDS
T03981
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
malg
Marinovum algicola
Pathway
malg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MALG_00472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malg03021
]
MALG_00472
03400 DNA repair and recombination proteins [BR:
malg03400
]
MALG_00472
Enzymes [BR:
malg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MALG_00472
Transcription machinery [BR:
malg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MALG_00472
DNA repair and recombination proteins [BR:
malg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MALG_00472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKO95669
LinkDB
All DBs
Position
478979..479995
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEVRPGNDPARQATAVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVALRMEVEGPKRLSINAKGPGVVTAGDISD
SAGIEVLNKDHVICHLDEGADVYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
RVSYDVQPTREGQVLDYDKLTLKIDTDGSVTPEDAVAYAARILQDQLSIFVNFDEPESAT
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggccgagctgatcaagccgacacagctggaggtccgccccggc
aacgatccggcgcgtcaggccaccgccgtggccgagcctctggaacgcggcttcggtctc
accctcggcaacgcgctgcgccgcgtgctgatgtcgtcgctgcaaggcgccgccatcacc
tccgtccagatcgacaacgtgctgcacgaattctcgtcggtggccggtgtgcgtgaagac
gtgacagatatcgttctgaacctcaagggcgtcgcgctgcgcatggaagtcgaagggccc
aagcgcctctcgatcaatgccaagggcccgggcgtcgtcaccgccggcgacatctcggac
agtgccggcatcgaggtgctgaacaaggaccacgtgatctgccacctcgacgaaggcgcg
gatgtctacatggaactgaccgtcaacaccggcaagggctatgtctcggctgacaagaac
aagcccgaagatgcgcctatcggcctgatcccgatcgatgcgatctattcgccggtcaag
cgggtgtcctatgatgtgcaaccgacccgtgagggccaggttctcgattatgacaagctg
acgctgaaaatcgacaccgacggctcggtcacccccgaggatgccgtggcctatgccgct
cgcatcctgcaagaccagctgtcgatcttcgtcaacttcgacgagccggaatcggcaacc
cgtcaggacgacgacgacggtctcgagttcaacccgctgctgctcaagaaggtcgacgag
ctcgagctttcggtgcgctcggccaactgcctgaagaacgacaatatcgtgtatattggc
gatctcatccagaagaccgaagccgagatgctgcgcacgccgaactttggccgcaagtcg
ctgaacgagatcaaggaagtgctgtcgggcatgggcctgcaccttggcatggatgtcgag
gactggccgccggacaacatcgaggatctggcgaaaaagttcgaagacgccttctga
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